Lista de obras - Mary Kearney - Dominio Público Uruguay

A robust measure of HIV-1 population turnover within chronically infected individuals.

artículo científico publicado en 2004

Acquisition of tenofovir-susceptible, emtricitabine-resistant HIV despite high adherence to daily pre-exposure prophylaxis: a case report

artículo científico publicado en 2018

Administration of vorinostat disrupts HIV-1 latency in patients on antiretroviral therapy

artículo científico publicado en 2012

Amplifying and quantifying HIV-1 RNA in HIV infected individuals with viral loads below the limit of detection by standard clinical assays

artículo científico publicado en 2011

Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA.

artículo científico publicado en 2013

Baseline natural killer and T cell populations correlation with virologic outcome after regimen simplification to atazanavir/ritonavir alone (ACTG 5201).

artículo científico publicado en 2014

Blinded, multicenter comparison of methods to detect a drug-resistant mutant of human immunodeficiency virus type 1 at low frequency

artículo científico publicado en 2006

Clonally expanded CD4+ T cells can produce infectious HIV-1 in vivo

artículo científico publicado en 2016

Clones of infected cells arise early in HIV-infected individuals

artículo científico publicado en 2019

Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors

artículo científico publicado en 2019

Comparison of standard PCR/cloning to single genome sequencing for analysis of HIV-1 populations

artículo científico publicado en 2010

Connection subdomain mutations in HIV-1 subtype-C treatment-experienced patients enhance NRTI and NNRTI drug resistance

artículo científico publicado en 2012

Correction: The Effect of Raltegravir Intensification on Low-level Residual Viremia in HIV-Infected Patients on Antiretroviral Therapy: A Randomized Controlled Trial.

artículo científico publicado en 2011

Current status of xenotropic murine leukemia virus-related retrovirus in chronic fatigue syndrome and prostate cancer: reach for a scorecard, not a prescription pad.

artículo científico publicado en 2010

Effector memory differentiation increases detection of replication-competent HIV-l in resting CD4+ T cells from virally suppressed individuals

artículo científico publicado en 2019

Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection

artículo científico publicado en 2011

Ex vivo activation of CD4+ T-cells from donors on suppressive ART can lead to sustained production of infectious HIV-1 from a subset of infected cells

artículo científico publicado en 2017

Failure to confirm XMRV/MLVs in the blood of patients with chronic fatigue syndrome: a multi-laboratory study

artículo científico publicado en 2011

False-positive HIV PCR test following ex vivo lentiviral gene transfer treatment of X-linked severe combined immunodeficiency vector

artículo científico publicado en 2014

Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase

artículo científico publicado en 2008

Genetic diversity of simian immunodeficiency virus encoding HIV-1 reverse transcriptase persists in macaques despite antiretroviral therapy

artículo científico publicado en 2010

HIV Infected T Cells Can Proliferate in vivo Without Inducing Expression of the Integrated Provirus

scientific article published on 01 October 2019

HIV Proviral Sequence Database: A New Public Database for Near Full-Length HIV Proviral Sequences and Their Meta-Analyses

artículo científico publicado en 2019

HIV evolution and diversity in ART-treated patients

artículo científico publicado en 2018

HIV latency. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells

artículo científico publicado en 2014

HIV populations are large and accumulate high genetic diversity in a nonlinear fashion

scientific article published on 15 May 2013

HIV-1 continues to replicate and evolve in patients with natural control of HIV infection

artículo científico publicado en 2010

HIV-1 expression within resting CD4+ T cells after multiple doses of vorinostat

artículo científico publicado en 2014

HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy

artículo científico publicado en 2019

HIV-1 persistence following extremely early initiation of antiretroviral therapy (ART) during acute HIV-1 infection: An observational study.

artículo científico publicado en 2017

Histone deacetylase inhibitor romidepsin induces HIV expression in CD4 T cells from patients on suppressive antiretroviral therapy at concentrations achieved by clinical dosing

artículo científico publicado en 2014

Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.

scientific article published on 30 December 2008

Immediate antiviral therapy appears to restrict resting CD4+ cell HIV-1 infection without accelerating the decay of latent infection

artículo científico publicado en 2012

Immunogenicity of AGS-004 Dendritic Cell Therapy in Patients Treated During Acute HIV Infection

artículo científico publicado en 2017

Improved single-copy assays for quantification of persistent HIV-1 viremia in patients on suppressive antiretroviral therapy

artículo científico publicado en 2014

Intact HIV Proviruses Persist in Children Seven to Nine Years after Initiation of Antiretroviral Therapy in the First Year of Life

artículo científico publicado en 2020

Lack of detectable HIV-1 molecular evolution during suppressive antiretroviral therapy

artículo científico publicado en 2014

Limited nucleotide changes in the Rev response element (RRE) during HIV-1 infection alter overall Rev-RRE activity and Rev multimerization

artículo científico publicado en 2013

Linked dual-class HIV resistance mutations are associated with treatment failure

artículo científico publicado en 2019

Low frequency nonnucleoside reverse-transcriptase inhibitor-resistant variants contribute to failure of efavirenz-containing regimens in treatment- experienced patients

artículo científico publicado en 2010

Low-frequency nevirapine (NVP)-resistant HIV-1 variants are not associated with failure of antiretroviral therapy in women without prior exposure to single-dose NVP.

scientific article published on 16 January 2014

Lower pre-ART intra-participant HIV-1 pol diversity may not be associated with virologic failure in adults

artículo científico publicado en 2018

Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule

artículo científico publicado en 2011

Multiple sources of contamination in samples from patients reported to have XMRV infection

artículo científico publicado en 2012

Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis

artículo científico publicado en 2005

No effect of raltegravir intensification on viral replication markers in the blood of HIV-1-infected patients receiving antiretroviral therapy

artículo científico publicado en 2012

No evidence of HIV replication in children on antiretroviral therapy.

artículo científico publicado en 2017

No evidence of ongoing HIV replication or compartmentalization in tissues during combination antiretroviral therapy: Implications for HIV eradication

scientific article published on 25 September 2019

Nucleic Acid, Antibody, and Virus Culture Methods to Detect Xenotropic MLV-Related Virus in Human Blood Samples.

artículo científico publicado en 2011

Ongoing HIV Replication During ART Reconsidered

article

Origin of Rebound Plasma HIV Includes Cells with Identical Proviruses That Are Transcriptionally Active before Stopping of Antiretroviral Therapy

artículo científico publicado en 2015

PAPNC, a novel method to calculate nucleotide diversity from large scale next generation sequencing data

artículo científico publicado en 2014

Patterns of Human Immunodeficiency Virus type 1 recombination ex vivo provide evidence for coadaptation of distant sites, resulting in purifying selection for intersubtype recombinants during replication.

artículo científico publicado en 2010

Phylogenetic inference for the study of within-host HIV-1 dynamics and persistence on antiretroviral therapy

artículo científico publicado en 2019

Predictors of residual viraemia in patients on long-term suppressive antiretroviral therapy

artículo científico publicado en 2012

Prevalence of XMRV nucleic acid and antibody in HIV-1-Infected men and in men at risk for HIV-1 Infection.

artículo científico publicado en 2011

Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir

artículo científico publicado en 2017

RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy

artículo científico publicado en 2009

Restricted replication of xenotropic murine leukemia virus-related virus in pigtailed macaques

artículo científico publicado en 2012

Retrovirus Integration Database (RID): a public database for retroviral insertion sites into host genomes

artículo científico publicado en 2016

Review: HIV-1 phylogeny during suppressive antiretroviral therapy

scientific article published on 01 May 2019

Review: Influence of ART on HIV genetics

artículo científico publicado en 2015

Selection and persistence of non-nucleoside reverse transcriptase inhibitor-resistant HIV-1 in patients starting and stopping non-nucleoside therapy.

artículo científico publicado en 2006

Short-course raltegravir intensification does not reduce persistent low-level viremia in patients with HIV-1 suppression during receipt of combination antiretroviral therapy

artículo científico publicado en 2010

Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule

artículo científico publicado en 2013

Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART.

artículo científico publicado en 2017

Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome

artículo científico publicado en 2004

Suppression of viremia and evolution of human immunodeficiency virus type 1 drug resistance in a macaque model for antiretroviral therapy

artículo científico publicado en 2007

The effect of raltegravir intensification on low-level residual viremia in HIV-infected patients on antiretroviral therapy: a randomized controlled trial

artículo científico publicado en 2010

Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1-Infected Apoptotic Cells

artículo científico publicado en 2015

Ultrasensitive allele-specific PCR reveals rare preexisting drug-resistant variants and a large replicating virus population in macaques infected with a simian immunodeficiency virus containing human immunodeficiency virus reverse transcriptase

artículo científico publicado en 2012

Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA.

artículo científico publicado en 2016

Well-mixed plasma and tissue viral populations in RT-SHIV-infected macaques implies a lack of viral replication in the tissues during antiretroviral therapy

artículo científico publicado en 2015

Lista de obras de Mary Kearney

A robust measure of HIV-1 population turnover within chronically infected individuals.

Acquisition of tenofovir-susceptible, emtricitabine-resistant HIV despite high adherence to daily pre-exposure prophylaxis: a case report

Administration of vorinostat disrupts HIV-1 latency in patients on antiretroviral therapy

Amplifying and quantifying HIV-1 RNA in HIV infected individuals with viral loads below the limit of detection by standard clinical assays

Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA.

Baseline natural killer and T cell populations correlation with virologic outcome after regimen simplification to atazanavir/ritonavir alone (ACTG 5201).

Blinded, multicenter comparison of methods to detect a drug-resistant mutant of human immunodeficiency virus type 1 at low frequency

Clonally expanded CD4+ T cells can produce infectious HIV-1 in vivo

Clones of infected cells arise early in HIV-infected individuals

Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors

Comparison of standard PCR/cloning to single genome sequencing for analysis of HIV-1 populations

Connection subdomain mutations in HIV-1 subtype-C treatment-experienced patients enhance NRTI and NNRTI drug resistance

Correction: The Effect of Raltegravir Intensification on Low-level Residual Viremia in HIV-Infected Patients on Antiretroviral Therapy: A Randomized Controlled Trial.

Current status of xenotropic murine leukemia virus-related retrovirus in chronic fatigue syndrome and prostate cancer: reach for a scorecard, not a prescription pad.

Effector memory differentiation increases detection of replication-competent HIV-l in resting CD4+ T cells from virally suppressed individuals

Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection

Ex vivo activation of CD4+ T-cells from donors on suppressive ART can lead to sustained production of infectious HIV-1 from a subset of infected cells

Failure to confirm XMRV/MLVs in the blood of patients with chronic fatigue syndrome: a multi-laboratory study

False-positive HIV PCR test following ex vivo lentiviral gene transfer treatment of X-linked severe combined immunodeficiency vector

Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase

Genetic diversity of simian immunodeficiency virus encoding HIV-1 reverse transcriptase persists in macaques despite antiretroviral therapy

HIV Infected T Cells Can Proliferate in vivo Without Inducing Expression of the Integrated Provirus

HIV Proviral Sequence Database: A New Public Database for Near Full-Length HIV Proviral Sequences and Their Meta-Analyses

HIV evolution and diversity in ART-treated patients

HIV latency. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells

HIV populations are large and accumulate high genetic diversity in a nonlinear fashion

HIV-1 continues to replicate and evolve in patients with natural control of HIV infection

HIV-1 expression within resting CD4+ T cells after multiple doses of vorinostat

HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy

HIV-1 persistence following extremely early initiation of antiretroviral therapy (ART) during acute HIV-1 infection: An observational study.

Histone deacetylase inhibitor romidepsin induces HIV expression in CD4 T cells from patients on suppressive antiretroviral therapy at concentrations achieved by clinical dosing

Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.

Immediate antiviral therapy appears to restrict resting CD4+ cell HIV-1 infection without accelerating the decay of latent infection

Immunogenicity of AGS-004 Dendritic Cell Therapy in Patients Treated During Acute HIV Infection

Improved single-copy assays for quantification of persistent HIV-1 viremia in patients on suppressive antiretroviral therapy

Intact HIV Proviruses Persist in Children Seven to Nine Years after Initiation of Antiretroviral Therapy in the First Year of Life

Lack of detectable HIV-1 molecular evolution during suppressive antiretroviral therapy

Limited nucleotide changes in the Rev response element (RRE) during HIV-1 infection alter overall Rev-RRE activity and Rev multimerization

Linked dual-class HIV resistance mutations are associated with treatment failure

Low frequency nonnucleoside reverse-transcriptase inhibitor-resistant variants contribute to failure of efavirenz-containing regimens in treatment- experienced patients

Low-frequency nevirapine (NVP)-resistant HIV-1 variants are not associated with failure of antiretroviral therapy in women without prior exposure to single-dose NVP.

Lower pre-ART intra-participant HIV-1 pol diversity may not be associated with virologic failure in adults

Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule

Multiple sources of contamination in samples from patients reported to have XMRV infection

Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis

No effect of raltegravir intensification on viral replication markers in the blood of HIV-1-infected patients receiving antiretroviral therapy

No evidence of HIV replication in children on antiretroviral therapy.

No evidence of ongoing HIV replication or compartmentalization in tissues during combination antiretroviral therapy: Implications for HIV eradication

Nucleic Acid, Antibody, and Virus Culture Methods to Detect Xenotropic MLV-Related Virus in Human Blood Samples.

Ongoing HIV Replication During ART Reconsidered

Origin of Rebound Plasma HIV Includes Cells with Identical Proviruses That Are Transcriptionally Active before Stopping of Antiretroviral Therapy

PAPNC, a novel method to calculate nucleotide diversity from large scale next generation sequencing data

Patterns of Human Immunodeficiency Virus type 1 recombination ex vivo provide evidence for coadaptation of distant sites, resulting in purifying selection for intersubtype recombinants during replication.

Phylogenetic inference for the study of within-host HIV-1 dynamics and persistence on antiretroviral therapy

Predictors of residual viraemia in patients on long-term suppressive antiretroviral therapy

Prevalence of XMRV nucleic acid and antibody in HIV-1-Infected men and in men at risk for HIV-1 Infection.

Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir

RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy

Restricted replication of xenotropic murine leukemia virus-related virus in pigtailed macaques

Retrovirus Integration Database (RID): a public database for retroviral insertion sites into host genomes

Review: HIV-1 phylogeny during suppressive antiretroviral therapy

Review: Influence of ART on HIV genetics

Selection and persistence of non-nucleoside reverse transcriptase inhibitor-resistant HIV-1 in patients starting and stopping non-nucleoside therapy.

Short-course raltegravir intensification does not reduce persistent low-level viremia in patients with HIV-1 suppression during receipt of combination antiretroviral therapy

Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule

Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART.

Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome

Suppression of viremia and evolution of human immunodeficiency virus type 1 drug resistance in a macaque model for antiretroviral therapy

The effect of raltegravir intensification on low-level residual viremia in HIV-infected patients on antiretroviral therapy: a randomized controlled trial

Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1-Infected Apoptotic Cells

Ultrasensitive allele-specific PCR reveals rare preexisting drug-resistant variants and a large replicating virus population in macaques infected with a simian immunodeficiency virus containing human immunodeficiency virus reverse transcriptase

Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA.

Well-mixed plasma and tissue viral populations in RT-SHIV-infected macaques implies a lack of viral replication in the tissues during antiretroviral therapy