Lista de obras - Zofia Gdaniec - Dominio Público Uruguay

A hydantoin isoform of cyclic N6-threonylcarbamoyladenosine (ct6A) is present in tRNAs

artículo científico publicado en 2016

A locked derivative of 8-aza-7-deazaadenosine

artículo científico publicado en 2008

A reinvestigated mechanism of ribosylation of adenine under silylating conditions

Base-pair induced shifts in the tautomeric equilibrium of a modified DNA base

scientific article published on 01 March 1993

Bulged adenosine influence on the RNA duplex conformation in solution

artículo científico publicado en 2008

Computational and NMR studies of RNA duplexes with an internal pseudouridine-adenosine base pair

scientific article published on 07 November 2019

Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with locked nucleic acids

artículo científico publicado en 2009

Diazepinoporphyrazines containing peripheral styryl substituents and their promising nanomolar photodynamic activity against oral cancer cells in liposomal formulations

artículo científico publicado en 2014

Distinctive structural motifs of RNA G-quadruplexes composed of AGG, CGG and UGG trinucleotide repeats

artículo científico publicado en 2014

Dynamics of dehaloperoxidase-hemoglobin A derived from NMR relaxation spectroscopy and molecular dynamics simulation.

artículo científico publicado en 2018

Effect of Neighbors on the Conformational Preferences of Glycosidic Linkages in Glycyrrhizic Acid and Its Mono- and Dideprotonated Forms: X-ray, NMR, and Computational Studies

Effects of G-quadruplex topology on translational inhibition by tRNA fragments in mammalian and plant systems in vitro.

artículo científico publicado en 2017

Formation of an RNA Quadruplex-Duplex Hybrid in Living Cells between mRNA of the Epidermal Growth Factor Receptor (EGFR) and a G-Rich Antisense Oligoribonucleotide

artículo científico publicado en 2020

Fusion of the (1)H NMR data of serum, urine and exhaled breath condensate in order to discriminate chronic obstructive pulmonary disease and obstructive sleep apnea syndrome

artículo científico publicado en 2015

Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs.

artículo científico publicado en 2017

Iron Regulatory Element and Internal Loop/Bulge Structure for Ferritin mRNA Studied by Cobalt(III) Hexammine Binding, Molecular Modeling, and NMR Spectroscopy ⬇️

artículo científico publicado el 10 de febrero de 1998

Iron regulatory element and internal Loop/Bulge structure for ferritin mRNA studied by Cobalt(III) hexammine binding, molecular modeling, and NMR spectroscopy

artículo científico publicado en 1999

Mature miRNAs form secondary structure, which suggests their function beyond RISC.

artículo científico publicado en 2014

Metal-cation regulation of enzyme dynamics is a key factor influencing the activity of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa

artículo científico publicado en 2018

Methoxyamine-induced mutagenesis of nucleic acids. A proton NMR study of oligonucleotides containing N4-methoxycytosine paired with adenine or guanine

scientific article published on 01 December 1996

NMR and DFT study on media effects on proton transfer in hydrogen bonding: concept of molecular probe with an application to ionic and super-polar liquids

artículo científico publicado en 2009

NMR and Raman Spectroscopy Monitoring of Proton/Deuteron Exchange in Aqueous Solutions of Ionic Liquids Forming Hydrogen Bond: A Role of Anions, Self-Aggregation, and Mesophase Formation ⬇️

artículo científico publicado el 26 de agosto de 2013

NMR and quantum chemistry study of mesoscopic effects in ionic liquids

artículo científico publicado en 2010

NMR probing of structural peculiarities in ionic solutions close to critical point.

artículo científico publicado en 2005

Overview of the RNA G-quadruplex structures

artículo científico publicado en 2016

Photoaddition of 5-Bromouracil to Uracil in Oligonucleotides Leading to 5,5′-Bipyrimidine-Type Adducts: Mechanism of the Photoreaction

artículo científico publicado en 2012

Photochemical behavior of 2-azidopurine tri-O-acetylribonucleoside in aqueous solution: unprecedented transformation into 1-(5'-O-acetyl-β-D-ribofuranosyl)-5-[(2-oxo-1,3,5-oxadiazocan-4-ylidene)amino]-1H-imidazole-4-carbaldehyde

artículo científico publicado en 2015

Photochemical studies and nanomolar photodynamic activities of phthalocyanines functionalized with 1,4,7-trioxanonyl moieties at their non-peripheral positions.

artículo científico publicado en 2015

Photochemistry of 6-amino-2-azido, 2-amino-6-azido and 2,6-diazido analogues of purine ribonucleosides in aqueous solutions

artículo científico publicado en 2014

Photocycloaddition of the T1 excited state of thioinosine to uridine and adenosine.

artículo científico publicado en 2009

Photoinduced fluorescent cross-linking of 5-chloro- and 5-fluoro-4-thiouridines with thymidine.

artículo científico publicado en 2010

Polyaminooligonucleotide: NMR structure of duplex DNA containing a nucleoside with spermine residue, N-[4,9,13-triazatridecan-1-yl]-2'-deoxycytidine

artículo científico publicado en 2014

Proof of ion-pair structures in ammonium-based protic ionic liquids using combined NMR and DFT/PCM-based chemical shift calculations

artículo científico publicado en 2017

Solution structure of a modified 2',5'-linked RNA hairpin involved in an equilibrium with duplex

artículo científico publicado en 2005

Structural characterization of a dimer of RNA duplexes composed of 8-bromoguanosine modified CGG trinucleotide repeats: a novel architecture of RNA quadruplexes

artículo científico publicado en 2016

The Suzuki cross-coupling reaction for the synthesis of porphyrazine possessing bulky 2,5-(biphenyl-4-yl)pyrrol-1-yl substituents in the periphery

The bulge region of HIV-1 TAR RNA binds metal ions in solution.

artículo científico publicado en 2002

The contribution of pseudouridine to stabilities and structure of RNAs

artículo científico publicado en 2013

The effect of polysialic acid on molecular dynamics of model membranes studied by 31P NMR spectroscopy

artículo científico publicado en 2004

The origin of the high stability of 3'-terminal uridine tetrads. The contributions of hydrogen bonding, stacking interactions and steric factors evaluated using modified oligonucleotide analogs

scientific article published on 23 September 2020

The spontaneous rearrangement of 2,4-dinitrophenyl substituent in ribonucleosides under neutral conditions

artículo científico publicado en 2010

Thermodynamic Features of Structural Motifs Formed by β-L-RNA

artículo científico publicado en 2016

Thermodynamic Stability of RNA Structures Formed by CNG Trinucleotide Repeats. Implication for Prediction of RNA Structure†

artículo científico publicado en 2005

Thermodynamic and structural contributions of the 6-thioguanosine residue to helical properties of RNA

artículo científico publicado en 2019

Unraveling the structural basis for the exceptional stability of RNA G-quadruplexes capped by a uridine tetrad at the 3' terminus

artículo científico publicado en 2018

Very short NMR relaxation times of anions in ionic liquids: new pulse sequence to eliminate the acoustic ringing

artículo científico publicado en 2014

Lista de obras de Zofia Gdaniec

A hydantoin isoform of cyclic N6-threonylcarbamoyladenosine (ct6A) is present in tRNAs

A locked derivative of 8-aza-7-deazaadenosine

A reinvestigated mechanism of ribosylation of adenine under silylating conditions

Base-pair induced shifts in the tautomeric equilibrium of a modified DNA base

Bulged adenosine influence on the RNA duplex conformation in solution

Computational and NMR studies of RNA duplexes with an internal pseudouridine-adenosine base pair

Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with locked nucleic acids

Diazepinoporphyrazines containing peripheral styryl substituents and their promising nanomolar photodynamic activity against oral cancer cells in liposomal formulations

Distinctive structural motifs of RNA G-quadruplexes composed of AGG, CGG and UGG trinucleotide repeats

Dynamics of dehaloperoxidase-hemoglobin A derived from NMR relaxation spectroscopy and molecular dynamics simulation.

Effect of Neighbors on the Conformational Preferences of Glycosidic Linkages in Glycyrrhizic Acid and Its Mono- and Dideprotonated Forms: X-ray, NMR, and Computational Studies

Effects of G-quadruplex topology on translational inhibition by tRNA fragments in mammalian and plant systems in vitro.

Formation of an RNA Quadruplex-Duplex Hybrid in Living Cells between mRNA of the Epidermal Growth Factor Receptor (EGFR) and a G-Rich Antisense Oligoribonucleotide

Fusion of the (1)H NMR data of serum, urine and exhaled breath condensate in order to discriminate chronic obstructive pulmonary disease and obstructive sleep apnea syndrome

Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs.

Iron Regulatory Element and Internal Loop/Bulge Structure for Ferritin mRNA Studied by Cobalt(III) Hexammine Binding, Molecular Modeling, and NMR Spectroscopy ⬇️

Iron regulatory element and internal Loop/Bulge structure for ferritin mRNA studied by Cobalt(III) hexammine binding, molecular modeling, and NMR spectroscopy

Mature miRNAs form secondary structure, which suggests their function beyond RISC.

Metal-cation regulation of enzyme dynamics is a key factor influencing the activity of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa

Methoxyamine-induced mutagenesis of nucleic acids. A proton NMR study of oligonucleotides containing N4-methoxycytosine paired with adenine or guanine

NMR and DFT study on media effects on proton transfer in hydrogen bonding: concept of molecular probe with an application to ionic and super-polar liquids

NMR and Raman Spectroscopy Monitoring of Proton/Deuteron Exchange in Aqueous Solutions of Ionic Liquids Forming Hydrogen Bond: A Role of Anions, Self-Aggregation, and Mesophase Formation ⬇️

NMR and quantum chemistry study of mesoscopic effects in ionic liquids

NMR probing of structural peculiarities in ionic solutions close to critical point.

Overview of the RNA G-quadruplex structures

Photoaddition of 5-Bromouracil to Uracil in Oligonucleotides Leading to 5,5′-Bipyrimidine-Type Adducts: Mechanism of the Photoreaction

Photochemical behavior of 2-azidopurine tri-O-acetylribonucleoside in aqueous solution: unprecedented transformation into 1-(5'-O-acetyl-β-D-ribofuranosyl)-5-[(2-oxo-1,3,5-oxadiazocan-4-ylidene)amino]-1H-imidazole-4-carbaldehyde

Photochemical studies and nanomolar photodynamic activities of phthalocyanines functionalized with 1,4,7-trioxanonyl moieties at their non-peripheral positions.

Photochemistry of 6-amino-2-azido, 2-amino-6-azido and 2,6-diazido analogues of purine ribonucleosides in aqueous solutions

Photocycloaddition of the T1 excited state of thioinosine to uridine and adenosine.

Photoinduced fluorescent cross-linking of 5-chloro- and 5-fluoro-4-thiouridines with thymidine.

Polyaminooligonucleotide: NMR structure of duplex DNA containing a nucleoside with spermine residue, N-[4,9,13-triazatridecan-1-yl]-2'-deoxycytidine

Proof of ion-pair structures in ammonium-based protic ionic liquids using combined NMR and DFT/PCM-based chemical shift calculations

Solution structure of a modified 2',5'-linked RNA hairpin involved in an equilibrium with duplex

Structural characterization of a dimer of RNA duplexes composed of 8-bromoguanosine modified CGG trinucleotide repeats: a novel architecture of RNA quadruplexes

The Suzuki cross-coupling reaction for the synthesis of porphyrazine possessing bulky 2,5-(biphenyl-4-yl)pyrrol-1-yl substituents in the periphery

The bulge region of HIV-1 TAR RNA binds metal ions in solution.

The contribution of pseudouridine to stabilities and structure of RNAs

The effect of polysialic acid on molecular dynamics of model membranes studied by 31P NMR spectroscopy

The origin of the high stability of 3'-terminal uridine tetrads. The contributions of hydrogen bonding, stacking interactions and steric factors evaluated using modified oligonucleotide analogs

The spontaneous rearrangement of 2,4-dinitrophenyl substituent in ribonucleosides under neutral conditions

Thermodynamic Features of Structural Motifs Formed by β-L-RNA

Thermodynamic Stability of RNA Structures Formed by CNG Trinucleotide Repeats. Implication for Prediction of RNA Structure†

Thermodynamic and structural contributions of the 6-thioguanosine residue to helical properties of RNA

Unraveling the structural basis for the exceptional stability of RNA G-quadruplexes capped by a uridine tetrad at the 3' terminus

Very short NMR relaxation times of anions in ionic liquids: new pulse sequence to eliminate the acoustic ringing