Lista de obras - Andrew J Leigh Brown - Dominio Público Uruguay

A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland

artículo científico publicado en 2016

A High HIV-1 Strain Variability in London, UK, Revealed by Full-Genome Analysis: Results from the ICONIC Project

article

A high HIV-1 strain variability in London, UK, revealed by full-genome analysis: Results from the ICONIC project

artículo científico publicado en 2018

A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus.

artículo científico publicado en 2008

Adaptation to Human Populations Is Revealed by Within-Host Polymorphisms in HIV-1 and Hepatitis C Virus

artículo científico publicado en 2007

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

artículo científico publicado en 2006

Adaptation to different human populations by HIV-1 revealed by codon-based analysis

article

An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1

artículo científico publicado en 2009

Analysis of the history and spread of HIV-1 in Uganda using phylodynamics

artículo científico publicado en 2015

Association of antiretroviral resistance genotypes with response to therapy--comparison of three models

artículo científico publicado en 2002

Automated analysis of phylogenetic clusters

artículo científico publicado en 2013

Completing the molecular investigation into the HIV outbreak at Glenochil prison

article

Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data

artículo científico publicado en 2009

Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico.

artículo científico publicado en 2014

Differences in HIV-1 pol Sequences From Female Genital Tract and Blood During Antiretroviral Therapy ⬇️

artículo científico publicado el 1 de septiembre de 2003

Dynamics of the emergence and establishment of a newly dominant genotype of Japanese encephalitis virus throughout Asia

artículo científico publicado en 2014

Early evolutionary origin of the planktic foraminifera inferred from small subunit rDNA sequence comparisons.

artículo científico

Employing phylogenetic tree shape statistics to resolve the underlying host population structure

artículo científico publicado en 2021

Episodic sexual transmission of HIV revealed by molecular phylodynamics

artículo científico publicado en 2008

Escape from collective denial: HIV transmission during surgery

artículo científico publicado en 1991

Estimating reassortment rates in co-circulating Eurasian swine influenza viruses

artículo científico publicado en 2012

Estimating selection pressures on HIV-1 using phylogenetic likelihood models.

artículo científico publicado en 2008

Estimating the rate of intersubtype recombination in early HIV-1 group M strains

artículo científico publicado en 2012

Evolution of envelope sequences of human immunodeficiency virus type 1 in cellular reservoirs in the setting of potent antiviral therapy.

artículo científico publicado en 1999

Evolutionary Biology of Human Immunodeficiency Virus

scholarly article by A J Leigh Brown & E C Holmes published November 1994 in Annual Review of Ecology, Evolution, and Systematics

Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza.

artículo científico publicado en 2013

Evolutionary relationships of the human immunodeficiency viruses

artículo científico publicado en 1990

Genetic basis of hypersusceptibility to protease inhibitors and low replicative capacity of human immunodeficiency virus type 1 strains in primary infection

artículo científico publicado en 2004

Genetic basis of variation in tenofovir drug susceptibility in HIV-1.

artículo científico publicado en 2008

HIV phylogenetics

artículo científico publicado en 2007

HIV-1 DNA Is Maintained in Antigen-Specific CD4+ T Cell Subsets in Patients on Long-Term Antiretroviral Therapy Regardless of Recurrent Antigen Exposure

article

HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences

artículo científico publicado en 2017

HIV-TRACE (Transmission Cluster Engine): a tool for large scale molecular epidemiology of HIV-1 and other rapidly evolving pathogens

artículo científico publicado en 2018

Heterogeneous clearance rates of long-lived lymphocytes infected with HIV: intrinsic stability predicts lifelong persistence

artículo científico publicado en 2003

Human immunodeficiency virus type 1 clade B superinfection: evidence for differential immune containment of distinct clade B strains

artículo científico publicado en 2005

Human macrophages accumulate HIV-1 particles in MHC II compartments

artículo científico publicado en 2002

Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis

article

Intercontinental dispersal of HIV-1 subtype B associated with transmission among men who have sex with men in Japan

artículo científico publicado en 2014

Method used to identify previously undiagnosed infections in the HIV outbreak at Glenochil prison

artículo científico publicado en 1999

Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom

artículo científico publicado en 2009

Molecular phylogeny of the planktic foraminifera

scholarly article by K. F. Darling et al published 1 October 1996 in The Journal of Foraminiferal Research

Non-disclosed men who have sex with men in UK HIV transmission networks: phylogenetic analysis of surveillance data

article

Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D

artículo científico publicado en 2014

Origin and fate of A/H1N1 influenza in Scotland during 2009

artículo científico publicado en 2012

PANGEA-HIV: phylogenetics for generalised epidemics in Africa

artículo científico publicado en 2015

Pervasive and non-random recombination in near full-length HIV genomes from Uganda

artículo científico publicado en 2020

Phenotypic hypersusceptibility to multiple protease inhibitors and low replicative capacity in patients who are chronically infected with human immunodeficiency virus type 1.

artículo científico publicado en 2005

Phylodynamics of infectious disease epidemics

artículo científico publicado en 2009

Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.

artículo científico publicado en 2016

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

artículo científico publicado en 2014

Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest?

artículo científico publicado en 2014

Phylogeography of HIV-1 suggests that Ugandan fishing communities are a sink for, not a source of, virus from general populations

scientific article published in Scientific Reports

Phylogeography of Japanese encephalitis virus: genotype is associated with climate

artículo científico publicado en 2013

Planktic foraminiferal molecular evolution and their polyphyletic origins from benthic taxa

Protecting HIV databases

Quantifying predictors for the spatial diffusion of avian influenza virus in China

artículo científico publicado en 2017

Reassortment patterns of avian influenza virus internal segments among different subtypes.

artículo científico publicado en 2014

Recent and Rapid Transmission of HIV among People who Inject Drugs in Scotland Revealed through Phylogenetic Analysis.

artículo científico publicado en 2018

Reconstructing the HIV-1 CRF02_AG and CRF06_cpx epidemics in Burkina Faso and West Africa using early samples

artículo científico publicado en 2016

Sequence data as evidence

scientific article published in Nature

Sero-prevalence and incidence of A/H1N1 2009 influenza infection in Scotland in winter 2009-2010

artículo científico publicado en 2011

Simple epidemiological dynamics explain phylogenetic clustering of HIV from patients with recent infection

artículo científico publicado en 2012

The Diversity and Distribution of Modern Planktic Foraminiferal Small Subunit Ribosomal RNA Genotypes and their Potential as Tracers of Present and Past Ocean Circulations

The HIV Epidemic: High-Income Countries ⬇️

artículo científico publicado el 1 de mayo de 2012

The Molecular Epidemiology and Transmission Dynamics of HIV Type 1 in a General Population Cohort in Uganda

artículo científico publicado en 2020

The contribution of viral genotype to plasma viral set-point in HIV infection

artículo científico publicado en 2014

The evolutionary dynamics of influenza A virus adaptation to mammalian hosts.

artículo científico publicado en 2013

The global transmission network of HIV-1

artículo científico publicado en 2013

Time trends in drug resistant HIV-1 infections in the United Kingdom up to 2009: multicentre observational study ⬇️

artículo científico publicado el 21 de agosto de 2012

Transmission fitness of drug-resistant human immunodeficiency virus and the prevalence of resistance in the antiretroviral-treated population

artículo científico publicado en 2003

Transmission network parameters estimated from HIV sequences for a nationwide epidemic

artículo científico publicado en 2011

Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters

artículo científico publicado en 2015

Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic

artículo científico publicado en 2016

Viral dynamics during structured treatment interruptions of chronic human immunodeficiency virus type 1 infection

artículo científico publicado en 2002

Lista de obras de Andrew J Leigh Brown

A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland

A High HIV-1 Strain Variability in London, UK, Revealed by Full-Genome Analysis: Results from the ICONIC Project

A high HIV-1 strain variability in London, UK, revealed by full-genome analysis: Results from the ICONIC project

A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus.

Adaptation to Human Populations Is Revealed by Within-Host Polymorphisms in HIV-1 and Hepatitis C Virus

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

Adaptation to different human populations by HIV-1 revealed by codon-based analysis

An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1

Analysis of the history and spread of HIV-1 in Uganda using phylodynamics

Association of antiretroviral resistance genotypes with response to therapy--comparison of three models

Automated analysis of phylogenetic clusters

Completing the molecular investigation into the HIV outbreak at Glenochil prison

Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data

Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico.

Differences in HIV-1 pol Sequences From Female Genital Tract and Blood During Antiretroviral Therapy ⬇️

Dynamics of the emergence and establishment of a newly dominant genotype of Japanese encephalitis virus throughout Asia

Early evolutionary origin of the planktic foraminifera inferred from small subunit rDNA sequence comparisons.

Employing phylogenetic tree shape statistics to resolve the underlying host population structure

Episodic sexual transmission of HIV revealed by molecular phylodynamics

Escape from collective denial: HIV transmission during surgery

Estimating reassortment rates in co-circulating Eurasian swine influenza viruses

Estimating selection pressures on HIV-1 using phylogenetic likelihood models.

Estimating the rate of intersubtype recombination in early HIV-1 group M strains

Evolution of envelope sequences of human immunodeficiency virus type 1 in cellular reservoirs in the setting of potent antiviral therapy.

Evolutionary Biology of Human Immunodeficiency Virus

Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza.

Evolutionary relationships of the human immunodeficiency viruses

Genetic basis of hypersusceptibility to protease inhibitors and low replicative capacity of human immunodeficiency virus type 1 strains in primary infection

Genetic basis of variation in tenofovir drug susceptibility in HIV-1.

HIV phylogenetics

HIV-1 DNA Is Maintained in Antigen-Specific CD4+ T Cell Subsets in Patients on Long-Term Antiretroviral Therapy Regardless of Recurrent Antigen Exposure

HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences

HIV-TRACE (Transmission Cluster Engine): a tool for large scale molecular epidemiology of HIV-1 and other rapidly evolving pathogens

Heterogeneous clearance rates of long-lived lymphocytes infected with HIV: intrinsic stability predicts lifelong persistence

Human immunodeficiency virus type 1 clade B superinfection: evidence for differential immune containment of distinct clade B strains

Human macrophages accumulate HIV-1 particles in MHC II compartments

Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis

Intercontinental dispersal of HIV-1 subtype B associated with transmission among men who have sex with men in Japan

Method used to identify previously undiagnosed infections in the HIV outbreak at Glenochil prison

Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom

Molecular phylogeny of the planktic foraminifera

Non-disclosed men who have sex with men in UK HIV transmission networks: phylogenetic analysis of surveillance data

Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D

Origin and fate of A/H1N1 influenza in Scotland during 2009

PANGEA-HIV: phylogenetics for generalised epidemics in Africa

Pervasive and non-random recombination in near full-length HIV genomes from Uganda

Phenotypic hypersusceptibility to multiple protease inhibitors and low replicative capacity in patients who are chronically infected with human immunodeficiency virus type 1.

Phylodynamics of infectious disease epidemics

Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest?

Phylogeography of HIV-1 suggests that Ugandan fishing communities are a sink for, not a source of, virus from general populations

Phylogeography of Japanese encephalitis virus: genotype is associated with climate

Planktic foraminiferal molecular evolution and their polyphyletic origins from benthic taxa

Protecting HIV databases

Quantifying predictors for the spatial diffusion of avian influenza virus in China

Reassortment patterns of avian influenza virus internal segments among different subtypes.

Recent and Rapid Transmission of HIV among People who Inject Drugs in Scotland Revealed through Phylogenetic Analysis.

Reconstructing the HIV-1 CRF02_AG and CRF06_cpx epidemics in Burkina Faso and West Africa using early samples

Sequence data as evidence

Sero-prevalence and incidence of A/H1N1 2009 influenza infection in Scotland in winter 2009-2010

Simple epidemiological dynamics explain phylogenetic clustering of HIV from patients with recent infection

The Diversity and Distribution of Modern Planktic Foraminiferal Small Subunit Ribosomal RNA Genotypes and their Potential as Tracers of Present and Past Ocean Circulations

The HIV Epidemic: High-Income Countries ⬇️

The Molecular Epidemiology and Transmission Dynamics of HIV Type 1 in a General Population Cohort in Uganda

The contribution of viral genotype to plasma viral set-point in HIV infection

The evolutionary dynamics of influenza A virus adaptation to mammalian hosts.

The global transmission network of HIV-1

Time trends in drug resistant HIV-1 infections in the United Kingdom up to 2009: multicentre observational study ⬇️

Transmission fitness of drug-resistant human immunodeficiency virus and the prevalence of resistance in the antiretroviral-treated population

Transmission network parameters estimated from HIV sequences for a nationwide epidemic

Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters

Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic

Viral dynamics during structured treatment interruptions of chronic human immunodeficiency virus type 1 infection