Lista de obras - Georgios V. Gkoutos - Dominio Público Uruguay

-Omics biomarker identification pipeline for translational medicine

artículo científico publicado en 2019

A Causal Web between Chronotype and Metabolic Health Traits

artículo científico publicado en 2021

A Practical Guide to Assess the Reproducibility of Echocardiographic Measurements

scientific article published on 22 October 2019

A Review of Current Standards and the Evolution of Histopathology Nomenclature for Laboratory Animals

article

A common layer of interoperability for biomedical ontologies based on OWL EL.

artículo científico publicado en 2011

A fast, accurate, and generalisable heuristic-based negation detection algorithm for clinical text

artículo científico publicado en 2021

Aber-OWL: a framework for ontology-based data access in biology ⬇️

artículo científico publicado en 2015

Allergic diseases and long-term risk of autoimmune disorders: longitudinal cohort study and cluster analysis

scientific article published on 14 November 2019

An infrastructure for ontology-based information systems in biomedicine: RICORDO case study

artículo científico publicado en 2011

An integrative, translational approach to understanding rare and orphan genetically based diseases

artículo científico publicado en 2013

An ontology approach to comparative phenomics in plants

artículo científico publicado en 2015

Analysis of mammalian gene function through broad-based phenotypic screens across a consortium of mouse clinics

artículo científico publicado en 2015

Analysis of the human diseasome using phenotype similarity between common, genetic, and infectious diseases ⬇️

artículo científico

Analyzing gene expression data in mice with the Neuro Behavior Ontology

artículo científico publicado en 2013

Best behaviour? Ontologies and the formal description of animal behaviour

artículo científico

CRAVE: a database, middleware and visualization system for phenotype ontologies

artículo científico publicado en 2004

Chemical machine vision: automated extraction of chemical metadata from raster images

artículo científico publicado en 2003

Cloud Computing Enabled Big Multi-Omics Data Analytics

publication published on 28 July 2021

Computational tools for comparative phenomics: the role and promise of ontologies

artículo científico

Data extraction for epidemiological research (DExtER): a novel tool for automated clinical epidemiology studies

artículo científico publicado en 2020

Data-driven discovery and validation of circulating blood-based biomarkers associated with prevalent atrial fibrillation

artículo científico publicado en 2019

Datamining with Ontologies

artículo científico

DeepPVP: phenotype-based prioritization of causative variants using deep learning

scholarly article published 2 May 2018

DeepPVP: phenotype-based prioritization of causative variants using deep learning

scientific article published on 06 February 2019

DermO; an ontology for the description of dermatologic disease

artículo científico publicado en 2016

Desiderata for the development of next-generation electronic health record phenotype libraries

artículo científico publicado en 2021

Duplication of the mitochondrial control region is associated with increased longevity in birds ⬇️

artículo científico publicado en 2016

EMPReSS: European mouse phenotyping resource for standardized screens

artículo científico

Entity/quality-based logical definitions for the human skeletal phenome using PATO

artículo científico publicado en 2009

Eumorphia and the European Mouse Phenotyping Resource for Standardized Screens (EMPReSS)

article

Evaluating the detection ability of a range of epistasis detection methods on simulated data for pure and impure epistatic models

artículo científico publicado en 2022

Evaluation of research in biomedical ontologies

artículo científico publicado en 2012

Exploring the elephant: histopathology in high-throughput phenotyping of mutant mice

artículo científico publicado en 2011

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences

artículo científico publicado en 2010

Fractal Analysis: Prognostic Value of Left Ventricular Trabecular Complexity Cardiovascular MRI in Participants with Hypertrophic Cardiomyopathy

artículo científico publicado en 2020

Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics

artículo científico publicado en 2012

Improving disease gene prioritization by comparing the semantic similarity of phenotypes in mice with those of human diseases

artículo científico publicado en 2012

Improving ontologies by automatic reasoning and evaluation of logical definitions

artículo científico publicado en 2011

Inflammation and Brain Structure in Schizophrenia and Other Neuropsychiatric Disorders: A Mendelian Randomization Study

artículo científico publicado en 2022

Integrating phenotype ontologies across multiple species

artículo científico publicado en 2010

Integrating phenotype ontologies with PhenomeNET.

artículo científico publicado en 2017

Integrating systems biology models and biomedical ontologies

artículo científico publicado en 2011

Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning

artículo científico publicado en 2011

JChemTidy: a tool for converting chemical Web document collections to an XHTML representation.

artículo científico

Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing.

artículo científico publicado en 2012

Linking common human diseases to their phenotypes; development of a resource for human phenomics

artículo científico publicado en 2021

Lipid-facing correlated mutations and dimerization in G-protein coupled receptors

article

Machine learning for the detection of early immunological markers as predictors of multi-organ dysfunction

artículo científico publicado en 2019

Modifier Ontologies for frequency, certainty, degree, and coverage phenotype modifier

scientific article published on 28 November 2018

Mouse Phenotype Database Integration Consortium: integration [corrected] of mouse phenome data resources

artículo científico publicado en 2007

Mouse genetic and phenotypic resources for human genetics

artículo científico publicado en 2012

Mouse model phenotypes provide information about human drug targets

scientific article published on 24 October 2013

Mouse, man, and meaning: bridging the semantics of mouse phenotype and human disease

scientific article published on 02 August 2009

MouseFinder: Candidate disease genes from mouse phenotype data

artículo científico publicado en 2012

Multi-faceted semantic clustering with text-derived phenotypes

artículo científico publicado en 2021

Multi-omics-based identification of atopic dermatitis target genes and their potential associations with metabolites and miRNAs

artículo científico publicado en 2021

New approaches to the representation and analysis of phenotype knowledge in human diseases and their animal models

artículo científico publicado en 2011

OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants

artículo científico publicado en 2018

Ontology-based cross-species integration and analysis of Saccharomyces cerevisiae phenotypes

artículo científico

Ontology-based prediction of cancer driver genes

scientific article published on 22 November 2019

Ontology-based validation and identification of regulatory phenotypes

artículo científico publicado en 2018

Overview of the interactive task in BioCreative V

artículo científico publicado en 2016

PIDO: the primary immunodeficiency disease ontology

artículo científico

PhenomeNET: a whole-phenome approach to disease gene discovery

artículo científico publicado en 2011

Phenotype ontologies for mouse and man: bridging the semantic gap.

artículo científico publicado en 2010

Phenotype ontologies: the bridge between genomics and evolution

artículo científico

Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish

artículo científico publicado en 2012

Prevalence of admission plasma glucose in 'diabetes' or 'at risk' ranges in hospital emergencies with no prior diagnosis of diabetes by gender, age and ethnicity

scientific article published on 15 May 2020

Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology

artículo científico

Representing physiological processes and their participants with PhysioMaps

artículo científico

Risk Factors for COVID-19 versus non-COVID-19 related in-hospital and community deaths by Local Authority District in Great Britain

artículo científico publicado en 2020

Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology

artículo científico publicado en 2012

Semantic prioritization of novel causative genomic variants

artículo científico publicado en 2017

Similarity-based search of model organism, disease and drug effect phenotypes

artículo científico

Systematic analysis of experimental phenotype data reveals gene functions

artículo científico publicado en 2013

The Drosophila phenotype ontology

artículo científico

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

artículo científico publicado en 2014

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics

artículo científico publicado en 2017

The RICORDO approach to semantic interoperability for biomedical data and models: strategy, standards and solutions

artículo científico publicado en 2011

The Units Ontology: a tool for integrating units of measurement in science

artículo científico publicado en 2012

The anatomy of phenotype ontologies: principles, properties and applications.

artículo científico

The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

artículo científico publicado en 2016

The mouse pathology ontology, MPATH; structure and applications

artículo científico publicado en 2013

The neurobehavior ontology: an ontology for annotation and integration of behavior and behavioral phenotypes

artículo científico publicado en 2012

The role of ontologies in biological and biomedical research: a functional perspective

artículo científico publicado en 2015

Towards a Phenotypic Semantic Web

Towards similarity-based differential diagnostics for common diseases

artículo científico publicado en 2021

Type 1 diabetes mellitus and risk of incident epilepsy: a population-based, open-cohort study.

artículo científico publicado en 2016

Uberon, an integrative multi-species anatomy ontology

artículo científico publicado en 2012

Uberon: towards a comprehensive multi-species anatomy ontology

Ultra-high Magnification Endocytoscopy and Molecular Markers for Defining Endoscopic and Histologic Remission in Ulcerative Colitis-An Exploratory Study to Define Deep Remission ⬇️

artículo científico publicado en 2021

Unifying European Biodiversity Informatics (BioUnify)

artículo científico publicado en 2016

Using AberOWL for fast and scalable reasoning over BioPortal ontologies

artículo científico publicado en 2016

Using ontologies to describe mouse phenotypes

artículo científico publicado en 2004

Lista de obras de Georgios V. Gkoutos

-Omics biomarker identification pipeline for translational medicine

A Causal Web between Chronotype and Metabolic Health Traits

A Practical Guide to Assess the Reproducibility of Echocardiographic Measurements

A Review of Current Standards and the Evolution of Histopathology Nomenclature for Laboratory Animals

A common layer of interoperability for biomedical ontologies based on OWL EL.

A fast, accurate, and generalisable heuristic-based negation detection algorithm for clinical text

Aber-OWL: a framework for ontology-based data access in biology ⬇️

Allergic diseases and long-term risk of autoimmune disorders: longitudinal cohort study and cluster analysis

An infrastructure for ontology-based information systems in biomedicine: RICORDO case study

An integrative, translational approach to understanding rare and orphan genetically based diseases

An ontology approach to comparative phenomics in plants

Analysis of mammalian gene function through broad-based phenotypic screens across a consortium of mouse clinics

Analysis of the human diseasome using phenotype similarity between common, genetic, and infectious diseases ⬇️

Analyzing gene expression data in mice with the Neuro Behavior Ontology

Best behaviour? Ontologies and the formal description of animal behaviour

CRAVE: a database, middleware and visualization system for phenotype ontologies

Chemical machine vision: automated extraction of chemical metadata from raster images

Cloud Computing Enabled Big Multi-Omics Data Analytics

Computational tools for comparative phenomics: the role and promise of ontologies

Data extraction for epidemiological research (DExtER): a novel tool for automated clinical epidemiology studies

Data-driven discovery and validation of circulating blood-based biomarkers associated with prevalent atrial fibrillation

Datamining with Ontologies

DeepPVP: phenotype-based prioritization of causative variants using deep learning

DeepPVP: phenotype-based prioritization of causative variants using deep learning

DermO; an ontology for the description of dermatologic disease

Desiderata for the development of next-generation electronic health record phenotype libraries

Duplication of the mitochondrial control region is associated with increased longevity in birds ⬇️

EMPReSS: European mouse phenotyping resource for standardized screens

Entity/quality-based logical definitions for the human skeletal phenome using PATO

Eumorphia and the European Mouse Phenotyping Resource for Standardized Screens (EMPReSS)

Evaluating the detection ability of a range of epistasis detection methods on simulated data for pure and impure epistatic models

Evaluation of research in biomedical ontologies

Exploring the elephant: histopathology in high-throughput phenotyping of mutant mice

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences

Fractal Analysis: Prognostic Value of Left Ventricular Trabecular Complexity Cardiovascular MRI in Participants with Hypertrophic Cardiomyopathy

Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics

Improving disease gene prioritization by comparing the semantic similarity of phenotypes in mice with those of human diseases

Improving ontologies by automatic reasoning and evaluation of logical definitions

Inflammation and Brain Structure in Schizophrenia and Other Neuropsychiatric Disorders: A Mendelian Randomization Study

Integrating phenotype ontologies across multiple species

Integrating phenotype ontologies with PhenomeNET.

Integrating systems biology models and biomedical ontologies

Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning

JChemTidy: a tool for converting chemical Web document collections to an XHTML representation.

Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing.

Linking common human diseases to their phenotypes; development of a resource for human phenomics

Lipid-facing correlated mutations and dimerization in G-protein coupled receptors

Machine learning for the detection of early immunological markers as predictors of multi-organ dysfunction

Modifier Ontologies for frequency, certainty, degree, and coverage phenotype modifier

Mouse Phenotype Database Integration Consortium: integration [corrected] of mouse phenome data resources

Mouse genetic and phenotypic resources for human genetics

Mouse model phenotypes provide information about human drug targets

Mouse, man, and meaning: bridging the semantics of mouse phenotype and human disease

MouseFinder: Candidate disease genes from mouse phenotype data

Multi-faceted semantic clustering with text-derived phenotypes

Multi-omics-based identification of atopic dermatitis target genes and their potential associations with metabolites and miRNAs

New approaches to the representation and analysis of phenotype knowledge in human diseases and their animal models

OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants

Ontology-based cross-species integration and analysis of Saccharomyces cerevisiae phenotypes

Ontology-based prediction of cancer driver genes

Ontology-based validation and identification of regulatory phenotypes

Ontology-based validation and identification of regulatory phenotypes

Overview of the interactive task in BioCreative V

PIDO: the primary immunodeficiency disease ontology

PhenomeNET: a whole-phenome approach to disease gene discovery

Phenotype ontologies for mouse and man: bridging the semantic gap.

Phenotype ontologies: the bridge between genomics and evolution

Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish

Prevalence of admission plasma glucose in 'diabetes' or 'at risk' ranges in hospital emergencies with no prior diagnosis of diabetes by gender, age and ethnicity

Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology

Representing physiological processes and their participants with PhysioMaps

Risk Factors for COVID-19 versus non-COVID-19 related in-hospital and community deaths by Local Authority District in Great Britain

Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology

Semantic prioritization of novel causative genomic variants

Similarity-based search of model organism, disease and drug effect phenotypes

Systematic analysis of experimental phenotype data reveals gene functions

The Drosophila phenotype ontology

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics