Lista de obras - Will Fischer - Dominio Público Uruguay

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets

artículo científico publicado en 2013

Comparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes

artículo científico publicado en 2006

Coping with viral diversity in HIV vaccine design: a response to Nickle et al.

artículo científico publicado en 2008

Correction: Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection

artículo científico publicado en 2017

Designing and testing broadly-protective filoviral vaccines optimized for cytotoxic T-lymphocyte epitope coverage

artículo científico publicado en 2012

Distinct evolutionary pressures underlie diversity in simian immunodeficiency virus and human immunodeficiency virus lineages

artículo científico publicado en 2012

Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

artículo científico publicado en 2016

Epitope-specific CD8+ T lymphocytes cross-recognize mutant simian immunodeficiency virus (SIV) sequences but fail to contain very early evolution and eventual fixation of epitope escape mutations during SIV infection

artículo científico publicado en 2011

Erratum for Smith et al., Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

artículo científico publicado en 2016

Evidence from small-subunit ribosomal RNA sequences for a fungal origin of Microsporidia.

artículo científico publicado en 2005

Expanded breadth of the T-cell response to mosaic human immunodeficiency virus type 1 envelope DNA vaccination

artículo científico publicado en 2008

GenBank: current status and future directions

artículo científico publicado en 1990

Genotype 1 and global hepatitis C T-cell vaccines designed to optimize coverage of genetic diversity.

artículo científico publicado en 2010

Hepatitis C genotype 1 mosaic vaccines are immunogenic in mice and induce stronger T-cell responses than natural strains

artículo científico publicado en 2012

Human APOBEC3 induced mutation of human immunodeficiency virus type-1 contributes to adaptation and evolution in natural infection

artículo científico publicado en 2014

Human leukocyte antigen-associated sequence polymorphisms in hepatitis C virus reveal reproducible immune responses and constraints on viral evolution

artículo científico publicado en 2007

Immunological and virological mechanisms of vaccine-mediated protection against SIV and HIV.

artículo científico publicado en 2013

Increased sequence diversity coverage improves detection of HIV-specific T cell responses

artículo científico publicado en 2007

Integrated sequence and immunology filovirus database at Los Alamos

artículo científico publicado en 2016

Molecular evidence for the early evolution of photosynthesis.

artículo científico publicado en 2000

Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys

artículo científico publicado en 2010

Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys

artículo científico publicado en 2010

P09-21 LB. Deep sequencing of HIV-1 from acute infection: low initial diversity, and rapid but variable CTL escape

article

P16-13. A greater breadth of HIV-1-specific T cell responses detected using mosaic peptides compare to consensus peptides.

artículo científico publicado en 2009

P20-21 LB. Gene-to-gene differences in evolutionary rate between HIV-1 and natural SIV from sooty mangabeys: implications for vaccine tests in non-human primates.

artículo científico publicado en 2009

Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants

artículo científico publicado en 2006

Protection against a mixed SHIV challenge by a broadly neutralizing antibody cocktail.

artículo científico publicado en 2017

Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection

artículo científico publicado en 2017

Sparse coding of pathology slides compared to transfer learning with deep neural networks

scholarly article by Will Fischer et al published 21 December 2018 in BMC Bioinformatics

Spike mutation pipeline reveals the emergence of a more transmissible form of SARS-CoV-2

scientific article published on 01 May 2020

Structural Transition and Antibody Binding of EBOV GP and ZIKV E Proteins from Pre-Fusion to Fusion-Initiation State

artículo científico publicado en 2018

T cell-based strategies for HIV-1 vaccines

artículo científico publicado en 2019

Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing

artículo científico publicado en 2010

Vaccine Advances against Venezuelan, Eastern, and Western Equine Encephalitis Viruses

artículo científico publicado en 2020

Web-based design and evaluation of T-cell vaccine candidates

artículo científico publicado en 2008

Lista de obras de Will Fischer

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets

Comparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes

Coping with viral diversity in HIV vaccine design: a response to Nickle et al.

Correction: Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection

Designing and testing broadly-protective filoviral vaccines optimized for cytotoxic T-lymphocyte epitope coverage

Distinct evolutionary pressures underlie diversity in simian immunodeficiency virus and human immunodeficiency virus lineages

Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

Epitope-specific CD8+ T lymphocytes cross-recognize mutant simian immunodeficiency virus (SIV) sequences but fail to contain very early evolution and eventual fixation of epitope escape mutations during SIV infection

Erratum for Smith et al., Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells

Evidence from small-subunit ribosomal RNA sequences for a fungal origin of Microsporidia.

Expanded breadth of the T-cell response to mosaic human immunodeficiency virus type 1 envelope DNA vaccination

GenBank: current status and future directions

Genotype 1 and global hepatitis C T-cell vaccines designed to optimize coverage of genetic diversity.

Hepatitis C genotype 1 mosaic vaccines are immunogenic in mice and induce stronger T-cell responses than natural strains

Human APOBEC3 induced mutation of human immunodeficiency virus type-1 contributes to adaptation and evolution in natural infection

Human leukocyte antigen-associated sequence polymorphisms in hepatitis C virus reveal reproducible immune responses and constraints on viral evolution

Immunological and virological mechanisms of vaccine-mediated protection against SIV and HIV.

Increased sequence diversity coverage improves detection of HIV-specific T cell responses

Integrated sequence and immunology filovirus database at Los Alamos

Molecular evidence for the early evolution of photosynthesis.

Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys

Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys

P09-21 LB. Deep sequencing of HIV-1 from acute infection: low initial diversity, and rapid but variable CTL escape

P16-13. A greater breadth of HIV-1-specific T cell responses detected using mosaic peptides compare to consensus peptides.

P20-21 LB. Gene-to-gene differences in evolutionary rate between HIV-1 and natural SIV from sooty mangabeys: implications for vaccine tests in non-human primates.

Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants

Protection against a mixed SHIV challenge by a broadly neutralizing antibody cocktail.

Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection

Sparse coding of pathology slides compared to transfer learning with deep neural networks

Spike mutation pipeline reveals the emergence of a more transmissible form of SARS-CoV-2

Structural Transition and Antibody Binding of EBOV GP and ZIKV E Proteins from Pre-Fusion to Fusion-Initiation State

T cell-based strategies for HIV-1 vaccines

Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing

Vaccine Advances against Venezuelan, Eastern, and Western Equine Encephalitis Viruses

Web-based design and evaluation of T-cell vaccine candidates