Lista de obras - Ashley Shade - Dominio Público Uruguay

16S rRNA/rRNA Gene Ratios and Cell Activity Staining Reveal Consistent Patterns of Microbial Activity in Plant-Associated Soil

artículo científico publicado en 2019

16S rRNA:rDNA ratios and cell activity staining reveal consistent patterns of soil microbial activity

A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites

artículo científico publicado en 2017

A communal catalogue reveals Earth's multiscale microbial diversity

artículo científico publicado en 2017

A global survey of arsenic-related genes in soil microbiomes.

artículo científico publicado en 2019

A meta-analysis of changes in bacterial and archaeal communities with time

artículo científico publicado en 2013

A town on fire! Integrating 16S rRNA gene amplicon analyses into an undergraduate microbiology lecture class

artículo científico publicado en 2018

Abundance-occupancy distributions to prioritize plant core microbiome membership

scientific article published on 01 June 2019

Arrive and wait: Inactive bacterial taxa contribute to perceived soil microbiome resilience after a multidecadal press disturbance

artículo científico publicado en 2024

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

artículo científico publicado en 2019

Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes.

artículo científico publicado en 2017

Bacterial community composition and dynamics spanning five years in freshwater bog lakes

article

Beyond the Venn diagram: the hunt for a core microbiome

artículo científico publicado en 2011

Broadening Participation in Scientific Conferences during the Era of Social Distancing

scientific article published on 22 September 2020

Can the black box be cracked? The augmentation of microbial ecology by high-resolution, automated sensing technologies

artículo científico publicado en 2009

Characterizing microbial communities through space and time

artículo científico publicado en 2011

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

artículo científico publicado en 2018

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

scholarly article published 22 December 2017

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

article

Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family members

artículo científico publicado en 2021

Comparison of primer sets for use in automated ribosomal intergenic spacer analysis of aquatic bacterial communities: an ecological perspective

artículo científico publicado en 2006

Computing Workflows for Biologists: A Roadmap

artículo científico publicado en 2015

Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity

artículo científico publicado en 2014

Controls on soil microbial community stability under climate change ⬇️

artículo científico publicado el 5 de septiembre de 2013

Corrigendum: Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau

artículo científico publicado en 2017

Culturing captures members of the soil rare biosphere

artículo científico publicado en 2012

Differential bacterial dynamics promote emergent community robustness to lake mixing: an epilimnion to hypolimnion transplant experiment

article

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

artículo científico publicado en 2017

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Diversity and mechanisms of arsenic resistance among soil bacteria impacted by the ongoing Centralia coal mine fire

Diversity is the question, not the answer

artículo científico publicado en 2016

Diversity is the question, not the answer

Dormancy dynamics and dispersal contribute to soil microbiome resilience

artículo científico publicado en 2020

Ecological patterns of seed microbiome diversity, transmission, and assembly

artículo científico publicado en 2017

Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient

scholarly article by Jackson W. Sorensen et al published 5 November 2018 in Nature Microbiology

Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient

Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau

artículo científico publicado en 2016

Erratum for Linz et al., "Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes".

artículo científico publicado en 2017

Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific Responses

artículo científico publicado en 2020

Frontiers and Opportunities in Bioenergy Crop Microbiome Research Networks

artículo científico publicado en 2022

Fundamentals of microbial community resistance and resilience

artículo científico publicado en 2012

Genetic Analysis of Flooding Tolerance in an Andean Diversity Panel of Dry Bean (Phaseolus vulgaris L.).

artículo científico publicado en 2018

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations

artículo científico publicado en 2016

Interannual dynamics and phenology of bacterial communities in a eutrophic lake

article

Lake microbial communities are resilient after a whole-ecosystem disturbance

artículo científico publicado en 2012

Lifestyles of rarity: understanding heterotrophic strategies to inform the ecology of the microbial rare biosphere

scientific article published in 2016

Lineage-specific responses of microbial communities to environmental change

artículo científico publicado en 2012

Locally Adapted <i>Mimulus</i> Ecotypes Differentially Impact Rhizosphere Bacterial and Archaeal Communities in an Environment-Dependent Manner

artículo científico publicado en 2020

Macroecology to Unite All Life, Large and Small

artículo científico publicado en 2018

Managing Plant Microbiomes for Sustainable Biofuel Production

Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities

Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project

artículo científico publicado en 2010

Microbial metabolites in the marine carbon cycle

artículo científico publicado en 2022

NITROGEN CHANGES AND DOMAIN BACTERIA RIBOTYPE DIVERSITY IN SOILS OVERLYING THE CENTRALIA, PENNSYLVANIA UNDERGROUND COAL MINE FIRE

No Evidence of Increased Chronic Traumatic Encephalopathy Pathology or Neurodegenerative Proteinopathy in Former Military Service Members: A Preliminary Study

scientific article published on 01 January 2019

Our microbial selves: what ecology can teach us

artículo científico publicado en 2011

Persistent microbiome members in the common bean rhizosphere: an integrated analysis of space, time, and plant genotype

artículo científico publicado en 2021

RefSoil+: A reference for antimicrobial resistance genes on soil plasmids

article

RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids

article

Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance

artículo científico publicado en 2011

Seasonal and episodic lake mixing stimulate differential planktonic bacterial dynamics

artículo científico publicado en 2009

Stochastic extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Strategies for Building Computing Skills To Support Microbiome Analysis: a Five-Year Perspective from the EDAMAME Workshop

scientific article published on 20 August 2019

Streptomycin application has no detectable effect on bacterial community structure in apple orchard soil

artículo científico publicado en 2013

Targeting microbial arsenic resistance genes: a new bioinformatic toolkit informs arsenic ecology and evolution in soil genomes and metagenomes

article

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

artículo científico publicado en 2018

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Temporal dynamics of South End tidal creek (Sapelo Island, Georgia) bacterial communities

artículo científico publicado en 2008

Temporal dynamics of bacterial communities during seed development and maturation

artículo científico publicado en 2020

Temporal patterns of rarity provide a more complete view of microbial diversity

artículo científico publicado en 2015

Terpenes modulate bacterial and fungal growth and sorghum rhizobiome communities

artículo científico publicado en 2023

The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics

artículo científico publicado en 2008

The microbial ecology of flowers: an emerging frontier in phyllosphere research

scientific article published in 2014

The under-ice microbiome of seasonally frozen lakes

article

Toward a Generalizable Framework of Disturbance Ecology Through Crowdsourced Science

artículo científico publicado en 2021

Trait-based community assembly and succession of the infant gut microbiome

artículo científico publicado en 2019

Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession

article published in 2018

Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession

article published in 2017

Typhoons initiate predictable change in aquatic bacterial communities

article by Stuart E. Jones et al published July 2008 in Limnology and Oceanography

Understanding Microbiome Stability in a Changing World

artículo científico publicado en 2018

Unexpected diversity during community succession in the apple flower microbiome

artículo científico publicado en 2013

When, where and how does microbial community composition matter?

artículo científico publicado en 2014

“Gradual Entrainment Lake Inverter” (GELI): A novel device for experimental lake mixing

article

Lista de obras de Ashley Shade

16S rRNA/rRNA Gene Ratios and Cell Activity Staining Reveal Consistent Patterns of Microbial Activity in Plant-Associated Soil

16S rRNA:rDNA ratios and cell activity staining reveal consistent patterns of soil microbial activity

A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites

A communal catalogue reveals Earth's multiscale microbial diversity

A global survey of arsenic-related genes in soil microbiomes.

A meta-analysis of changes in bacterial and archaeal communities with time

A town on fire! Integrating 16S rRNA gene amplicon analyses into an undergraduate microbiology lecture class

Abundance-occupancy distributions to prioritize plant core microbiome membership

Arrive and wait: Inactive bacterial taxa contribute to perceived soil microbiome resilience after a multidecadal press disturbance

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes.

Bacterial community composition and dynamics spanning five years in freshwater bog lakes

Beyond the Venn diagram: the hunt for a core microbiome

Broadening Participation in Scientific Conferences during the Era of Social Distancing

Can the black box be cracked? The augmentation of microbial ecology by high-resolution, automated sensing technologies

Characterizing microbial communities through space and time

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil

Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family members

Comparison of primer sets for use in automated ribosomal intergenic spacer analysis of aquatic bacterial communities: an ecological perspective

Computing Workflows for Biologists: A Roadmap

Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity

Controls on soil microbial community stability under climate change ⬇️

Corrigendum: Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau

Culturing captures members of the soil rare biosphere

Differential bacterial dynamics promote emergent community robustness to lake mixing: an epilimnion to hypolimnion transplant experiment

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Diversity and mechanisms of arsenic resistance among soil bacteria impacted by the ongoing Centralia coal mine fire

Diversity is the question, not the answer

Diversity is the question, not the answer

Diversity is the question, not the answer

Dormancy dynamics and dispersal contribute to soil microbiome resilience

Ecological patterns of seed microbiome diversity, transmission, and assembly

Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient

Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient

Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau

Erratum for Linz et al., "Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes".

Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific Responses

Frontiers and Opportunities in Bioenergy Crop Microbiome Research Networks

Fundamentals of microbial community resistance and resilience

Genetic Analysis of Flooding Tolerance in an Andean Diversity Panel of Dry Bean (Phaseolus vulgaris L.).

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations

Interannual dynamics and phenology of bacterial communities in a eutrophic lake

Lake microbial communities are resilient after a whole-ecosystem disturbance

Lifestyles of rarity: understanding heterotrophic strategies to inform the ecology of the microbial rare biosphere

Lineage-specific responses of microbial communities to environmental change

Locally Adapted <i>Mimulus</i> Ecotypes Differentially Impact Rhizosphere Bacterial and Archaeal Communities in an Environment-Dependent Manner

Macroecology to Unite All Life, Large and Small

Managing Plant Microbiomes for Sustainable Biofuel Production

Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities

Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project

Microbial metabolites in the marine carbon cycle

NITROGEN CHANGES AND DOMAIN BACTERIA RIBOTYPE DIVERSITY IN SOILS OVERLYING THE CENTRALIA, PENNSYLVANIA UNDERGROUND COAL MINE FIRE

No Evidence of Increased Chronic Traumatic Encephalopathy Pathology or Neurodegenerative Proteinopathy in Former Military Service Members: A Preliminary Study

Our microbial selves: what ecology can teach us

Persistent microbiome members in the common bean rhizosphere: an integrated analysis of space, time, and plant genotype

RefSoil+: A reference for antimicrobial resistance genes on soil plasmids

RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids

Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance

Seasonal and episodic lake mixing stimulate differential planktonic bacterial dynamics

Stochastic extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire

Strategies for Building Computing Skills To Support Microbiome Analysis: a Five-Year Perspective from the EDAMAME Workshop

Streptomycin application has no detectable effect on bacterial community structure in apple orchard soil

Targeting microbial arsenic resistance genes: a new bioinformatic toolkit informs arsenic ecology and evolution in soil genomes and metagenomes

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Temporal dynamics of South End tidal creek (Sapelo Island, Georgia) bacterial communities

Temporal dynamics of bacterial communities during seed development and maturation

Temporal patterns of rarity provide a more complete view of microbial diversity

Terpenes modulate bacterial and fungal growth and sorghum rhizobiome communities

The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics

The microbial ecology of flowers: an emerging frontier in phyllosphere research

The under-ice microbiome of seasonally frozen lakes

Toward a Generalizable Framework of Disturbance Ecology Through Crowdsourced Science