Lista de obras - Kazuharu Arakawa - Dominio Público Uruguay

A web server for interactive and zoomable Chaos Game Representation images

artículo científico publicado en 2009

AMPK activity is required for the induction of anhydrobiosis in a tardigrade Hypsibius exemplaris, and its potential up-regulator is PP2A

artículo científico publicado en 2019

An integrative description of Macrobiotus shonaicus sp. nov. (Tardigrada: Macrobiotidae) from Japan with notes on its phylogenetic position within the hufelandi group

artículo científico publicado en 2018

Analysis of DNA repair and protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after exposure to UVC radiation

artículo científico publicado en 2013

Analysis of repetitive amino acid motifs reveals the essential features of spider dragline silk proteins.

artículo científico publicado en 2017

Base editors for simultaneous introduction of C-to-T and A-to-G mutations

artículo científico publicado en 2020

BioHackathon 2015: Semantics of data for life sciences and reproducible research

artículo científico publicado en 2020

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

artículo científico publicado en 2014

Collaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelago

artículo científico publicado en 2018

Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus.

artículo científico publicado en 2017

Comparative study of circadian oscillatory network models of Drosophila

artículo científico publicado en 2008

Comparison of the transcriptomes of two tardigrades with different hatching coordination

scientific article published on 09 December 2019

Complete Genome Sequence of Bacillus sp. Strain KH172YL63, Isolated from Deep-Sea Sediment

artículo científico publicado en 2020

Complete Genome Sequence of Bifidobacterium longum Strain Jih1, Isolated from Human Feces

artículo científico publicado en 2020

Complete Genome Sequence of Halomonas hydrothermalis Strain Slthf2, a Halophilic Bacterium Isolated from a Deep-Sea Hydrothermal-Vent Environment

scientific article published on 09 April 2020

Complete Genome Sequence of Halomonas meridiana Strain Eplume2, Isolated from a Hydrothermal Plume in the Northeast Pacific Ocean

artículo científico publicado en 2020

Complete Genome Sequence of Halomonas meridiana Strain Slthf1, Isolated from a Deep-Sea Thermal Vent

artículo científico publicado en 2020

Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing

artículo científico publicado en 2019

Complete Genome Sequence of Halomonas sulfidaeris Strain Esulfide1 Isolated from a Metal Sulfide Rock at a Depth of 2,200 Meters, Obtained Using Nanopore Sequencing

artículo científico publicado en 2019

Complete Genome Sequence of Halophilic Deep-Sea Bacterium Halomonas axialensis Strain Althf1

scientific article published on 01 August 2019

Complete Genome Sequence of sp. Strain KH172YL61, Isolated from Deep-Sea Sediments in the Nankai Trough, Japan

artículo científico publicado en 2019

Complete Genome Sequences of Two Cutibacterium acnes Strains Isolated from an Orthopedic Surgical Site

artículo científico publicado en 2020

Comprehensive Transcriptome Sequencing of Tanaidacea with Proteomic Evidences for Their Silk

artículo científico publicado en 2021

Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes

artículo científico publicado en 2011

De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions

artículo científico publicado en 2016

Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly.

artículo científico publicado en 2015

Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein

artículo científico publicado en 2016

G-language genome analysis environment with REST and SOAP web service interfaces

artículo científico

GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes

artículo científico publicado en 2006

GEMBASSY: an EMBOSS associated software package for comprehensive genome analyses

artículo científico publicado en 2013

GPAC: benchmarking the sensitivity of genome informatics analysis to genome annotation completeness

scientific article published on 01 January 2006

Genome Projector: zoomable genome map with multiple views

artículo científico publicado en 2009

Genome sequencing of a single tardigrade Hypsibius dujardini individual

artículo científico publicado en 2016

Glucan synthase-like 2 is indispensable for paramylon synthesis in Euglena gracilis

artículo científico publicado en 2017

In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs

artículo científico publicado en 2007

KBWS: an EMBOSS associated package for accessing bioinformatics web services

artículo científico

MEGU: pathway mapping web-service based on KEGG and SVG

artículo científico publicado en 2006

Measures of compositional strand bias related to replication machinery and its applications

artículo científico

Merging multiple omics datasets in silico: statistical analyses and data interpretation

artículo científico publicado en 2013

Metabolic flux analysis and visualization.

artículo científico publicado en 2011

Molecular palaeontology illuminates the evolution of ecdysozoan vision.

artículo científico publicado en 2018

Multiple high-throughput analyses monitor the response of E. coli to perturbations

artículo científico publicado en 2007

Nanopore sequencing: Review of potential applications in functional genomics

scientific article published on 29 April 2019

New Tardigrade Opsins and Differential Expression Analyses Show Ontogenic Variation in Light Perception

artículo científico publicado en 2021

No evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

artículo científico publicado en 2016

Noise-reduction filtering for accurate detection of replication termini in bacterial genomes

scholarly article by Kazuharu Arakawa published in December 2006

Novel mitochondria-targeted heat-soluble proteins identified in the anhydrobiotic Tardigrade improve osmotic tolerance of human cells

artículo científico publicado en 2015

On the interplay of gene positioning and the role of rho-independent terminators in Escherichia coli.

artículo científico publicado en 2006

Orb-weaving spider Araneus ventricosus genome elucidates the spidroin gene catalogue

artículo científico publicado en 2019

Pathway projector: web-based zoomable pathway browser using KEGG atlas and Google Maps API

artículo científico publicado en 2009

Patterns of population structure and complex haplotype sharing among field isolates of the green alga Chlamydomonas reinhardtii

scientific article published on 11 September 2019

Performance comparison of second- and third-generation sequencers using a bacterial genome with two chromosomes

artículo científico publicado en 2014

Pre-treatment with D942, a furancarboxylic acid derivative, increases desiccation tolerance in an anhydrobiotic tardigrade Hypsibius exemplaris

artículo científico publicado en 2020

Publisher Correction: Base editors for simultaneous introduction of C-to-T and A-to-G mutations

artículo científico publicado en 2020

Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index

artículo científico publicado en 2009

Quantitative assay for TALEN activity at endogenous genomic loci

artículo científico publicado en 2013

Rearing and observation of immature stages of the hoverfly Microdon katsurai (Diptera, Syrphidae)

artículo científico publicado en 2016

Restauro-G: a rapid genome re-annotation system for comparative genomics.

artículo científico publicado en 2007

Selection effects on the positioning of genes and gene structures from the interplay of replication and transcription in bacterial genomes.

artículo científico publicado en 2007

Simultaneous Metabarcoding of Eukaryotes and Prokaryotes to Elucidate the Community Structures within Tardigrade Microhabitats

artículo científico publicado en 2020

Spider silk self-assembly via modular liquid-liquid phase separation and nanofibrillation

artículo científico publicado en 2020

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

artículo científico publicado en 2011

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

artículo científico publicado en 2013

The GC skew index: a measure of genomic compositional asymmetry and the degree of replicational selection.

artículo científico publicado en 2007

The Unique Antimicrobial Recognition and Signaling Pathways in Tardigrades with a Comparison Across Ecdysozoa

artículo científico publicado en 2020

The bagworm genome reveals a unique fibroin gene that provides high tensile strength

article

The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae)

The complete mitochondrial genome of Eumeta variegata (Lepidoptera: Psychidae)

article by Kazuharu Arakawa et al published 3 July 2018 in Mitochondrial DNA. Part B, Resources

Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades

scientific article published on 28 May 2022

Transcriptomic data during development of a two-spotted cricket <i>Gryllus bimaculatus</i>

publication published on 20 September 2021

Two novel heat-soluble protein families abundantly expressed in an anhydrobiotic tardigrade

artículo científico publicado en 2012

Undesigned Selection for Replication Termination of Bacterial Chromosomes

artículo científico publicado en 2014

Validating the significance of genomic properties of Chi sites from the distribution of all octamers in Escherichia coli

artículo científico publicado en 2007

Validation of bacterial replication termination models using simulation of genomic mutations

artículo científico publicado en 2012

eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria.

artículo científico publicado en 2017

Lista de obras de Kazuharu Arakawa

A web server for interactive and zoomable Chaos Game Representation images

AMPK activity is required for the induction of anhydrobiosis in a tardigrade Hypsibius exemplaris, and its potential up-regulator is PP2A

An integrative description of Macrobiotus shonaicus sp. nov. (Tardigrada: Macrobiotidae) from Japan with notes on its phylogenetic position within the hufelandi group

Analysis of DNA repair and protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after exposure to UVC radiation

Analysis of repetitive amino acid motifs reveals the essential features of spider dragline silk proteins.

Base editors for simultaneous introduction of C-to-T and A-to-G mutations

BioHackathon 2015: Semantics of data for life sciences and reproducible research

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

Collaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelago

Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus.

Comparative study of circadian oscillatory network models of Drosophila

Comparison of the transcriptomes of two tardigrades with different hatching coordination

Complete Genome Sequence of Bacillus sp. Strain KH172YL63, Isolated from Deep-Sea Sediment

Complete Genome Sequence of Bifidobacterium longum Strain Jih1, Isolated from Human Feces

Complete Genome Sequence of Halomonas hydrothermalis Strain Slthf2, a Halophilic Bacterium Isolated from a Deep-Sea Hydrothermal-Vent Environment

Complete Genome Sequence of Halomonas meridiana Strain Eplume2, Isolated from a Hydrothermal Plume in the Northeast Pacific Ocean

Complete Genome Sequence of Halomonas meridiana Strain Slthf1, Isolated from a Deep-Sea Thermal Vent

Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing

Complete Genome Sequence of Halomonas sulfidaeris Strain Esulfide1 Isolated from a Metal Sulfide Rock at a Depth of 2,200 Meters, Obtained Using Nanopore Sequencing

Complete Genome Sequence of Halophilic Deep-Sea Bacterium Halomonas axialensis Strain Althf1

Complete Genome Sequence of sp. Strain KH172YL61, Isolated from Deep-Sea Sediments in the Nankai Trough, Japan

Complete Genome Sequences of Two Cutibacterium acnes Strains Isolated from an Orthopedic Surgical Site

Comprehensive Transcriptome Sequencing of Tanaidacea with Proteomic Evidences for Their Silk

Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes

De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions

Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly.

Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein

G-language genome analysis environment with REST and SOAP web service interfaces

GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes

GEMBASSY: an EMBOSS associated software package for comprehensive genome analyses

GPAC: benchmarking the sensitivity of genome informatics analysis to genome annotation completeness

Genome Projector: zoomable genome map with multiple views

Genome sequencing of a single tardigrade Hypsibius dujardini individual

Glucan synthase-like 2 is indispensable for paramylon synthesis in Euglena gracilis

In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs

KBWS: an EMBOSS associated package for accessing bioinformatics web services

MEGU: pathway mapping web-service based on KEGG and SVG

Measures of compositional strand bias related to replication machinery and its applications

Merging multiple omics datasets in silico: statistical analyses and data interpretation

Metabolic flux analysis and visualization.

Molecular palaeontology illuminates the evolution of ecdysozoan vision.

Multiple high-throughput analyses monitor the response of E. coli to perturbations

Nanopore sequencing: Review of potential applications in functional genomics

New Tardigrade Opsins and Differential Expression Analyses Show Ontogenic Variation in Light Perception

No evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

Noise-reduction filtering for accurate detection of replication termini in bacterial genomes

Novel mitochondria-targeted heat-soluble proteins identified in the anhydrobiotic Tardigrade improve osmotic tolerance of human cells

On the interplay of gene positioning and the role of rho-independent terminators in Escherichia coli.

Orb-weaving spider Araneus ventricosus genome elucidates the spidroin gene catalogue

Pathway projector: web-based zoomable pathway browser using KEGG atlas and Google Maps API

Patterns of population structure and complex haplotype sharing among field isolates of the green alga Chlamydomonas reinhardtii

Performance comparison of second- and third-generation sequencers using a bacterial genome with two chromosomes

Pre-treatment with D942, a furancarboxylic acid derivative, increases desiccation tolerance in an anhydrobiotic tardigrade Hypsibius exemplaris

Publisher Correction: Base editors for simultaneous introduction of C-to-T and A-to-G mutations

Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index

Quantitative assay for TALEN activity at endogenous genomic loci

Rearing and observation of immature stages of the hoverfly Microdon katsurai (Diptera, Syrphidae)

Restauro-G: a rapid genome re-annotation system for comparative genomics.

Selection effects on the positioning of genes and gene structures from the interplay of replication and transcription in bacterial genomes.

Simultaneous Metabarcoding of Eukaryotes and Prokaryotes to Elucidate the Community Structures within Tardigrade Microhabitats

Spider silk self-assembly via modular liquid-liquid phase separation and nanofibrillation

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

The GC skew index: a measure of genomic compositional asymmetry and the degree of replicational selection.

The Unique Antimicrobial Recognition and Signaling Pathways in Tardigrades with a Comparison Across Ecdysozoa

The bagworm genome reveals a unique fibroin gene that provides high tensile strength

The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae)

The complete mitochondrial genome of Eumeta variegata (Lepidoptera: Psychidae)

Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades

Transcriptomic data during development of a two-spotted cricket <i>Gryllus bimaculatus</i>

Two novel heat-soluble protein families abundantly expressed in an anhydrobiotic tardigrade

Undesigned Selection for Replication Termination of Bacterial Chromosomes

Validating the significance of genomic properties of Chi sites from the distribution of all octamers in Escherichia coli

Validation of bacterial replication termination models using simulation of genomic mutations

eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria.