Lista de obras - Anita Burgun - Dominio Público Uruguay

A Web Terminology Server Using UMLS for the Description of Medical Procedures ⬇️

artículo científico publicado el 1 de septiembre de 1997

A contextual coding system for transplantation and end stage diseases

artículo científico publicado en 2003

A first evaluation of a pedagogical network for medical students at the University Hospital of Rennes.

artículo científico publicado en 1998

A framework for comparing phenotype annotations of orthologous genes

artículo científico publicado en 2010

A knowledge management platform for documentation of case reports in pharmacovigilance.

artículo científico publicado en 2009

A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: the case of OBO disease ontologies

artículo científico

A network of web multimedia medical information servers for a medical school and university hospital.

artículo científico publicado en 1997

A novel data-driven workflow combining literature and electronic health records to estimate comorbidities burden for a specific disease: a case study on autoimmune comorbidities in patients with celiac disease

artículo científico publicado en 2017

A system that facilitates the orientation within procedure nomenclatures through a semantic approach ⬇️

artículo científico publicado el 1 de octubre de 1994

A transversal approach to predict gene product networks from ontology-based similarity

artículo científico publicado en 2007

A unified representation of findings in clinical radiology using the UMLS and DICOM.

artículo científico

A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm

artículo científico publicado en 2013

Accessing and integrating data and knowledge for biomedical research.

artículo científico publicado en 2008

Adverse Drug Reaction Identification and Extraction in Social Media: A Scoping Review

artículo científico publicado en 2015

Aggregating UMLS semantic types for reducing conceptual complexity.

artículo científico publicado en 2001

Aligning biomedical ontologies using lexical methods and the UMLS: the case of disease ontologies.

artículo científico

Aligning knowledge sources in the UMLS: methods, quantitative results, and applications.

artículo científico publicado en 2004

Amplification of Terminologia anatomica by French language terms using Latin terms matching algorithm: a prototype for other language

artículo científico publicado en 2006

An ontological analysis of medical Bayesian indicators of performance

scientific article published on 03 January 2017

An ontology-based annotation of cardiac implantable electronic devices to detect therapy changes in a national registry

artículo científico

Analyzing polysemous concepts from a clinical perspective: application to auditing concept categorization in the UMLS

artículo científico publicado en 2009

Aspects of the Taxonomic Relation in the Biomedical Domain

artículo científico publicado en 2001

Assessing the consistency of a biomedical terminology through lexical knowledge

artículo científico publicado en 2002

Automated classification of free-text pathology reports for registration of incident cases of cancer.

artículo científico

Automatic computation of CHA2DS2-VASc score: information extraction from clinical texts for thromboembolism risk assessment.

artículo científico publicado en 2011

Automatic concept extraction from spoken medical reports

artículo científico publicado en 2003

Automatic enrichment of the unified medical language system starting from the ADM knowledge base.

artículo científico publicado en 1999

Big Data and machine learning in radiation oncology: State of the art and future prospects

artículo científico publicado en 2016

BioMeKe: an ontology-based biomedical knowledge extraction system devoted to transcriptome analysis.

artículo científico

Classifying diseases with respect to anatomy: a study in SNOMED CT

artículo científico publicado en 2005

Clinical data integration model. Core interoperability ontology for research using primary care data.

artículo científico publicado en 2014

Collaborative environment for clinical reasoning and distance learning sessions.

artículo científico publicado en 2003

Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets

artículo científico publicado en 2006

Combining voice recognition and automatic indexing of medical reports.

artículo científico publicado en 2002

Comparing Drools and ontology reasoning approaches for telecardiology decision support.

artículo científico

Computer assisted medical diagnosis using the Web.

artículo científico publicado en 1997

Creating a magnetic resonance imaging ontology.

artículo científico

Desiderata for domain reference ontologies in biomedicine

artículo científico

Design considerations for an ontology in the domain of organ failure and transplantation.

artículo científico

Designing a sub-set of the UMLS knowledge base applied to a clinical domain: methods and evaluation.

artículo científico

Detailed clinical modelling approach to data extraction from heterogeneous data sources for clinical research

artículo científico publicado en 2014

Detection of Cases of Noncompliance to Drug Treatment in Patient Forum Posts: Topic Model Approach (Preprint)

Detection of Cases of Noncompliance to Drug Treatment in Patient Forum Posts: Topic Model Approach.

artículo científico publicado en 2018

Developing the ontological foundations of a terminological system for end-stage diseases, organ failure, dialysis and transplantation

artículo científico

Discussion of "biomedical ontologies: toward scientific debate".

artículo científico

Documentation in pharmacovigilance: using an ontology to extend and normalize Pubmed queries.

scientific article published on January 2010

Erratum to: Partnering with patients in translational oncology research: ethical approach.

artículo científico publicado en 2017

Evaluation of Internet Social Networks using Net scoring Tool: A Case Study in Adverse Drug Reaction Mining

artículo científico publicado en 2015

Evaluation of WordNet as a source of lay knowledge for molecular biology and genetic diseases: a feasibility study

artículo científico publicado en 2003

Evaluation of the Unified Medical Language System as a Medical Knowledge Source ⬇️

artículo científico publicado el 1 de enero de 1998

Evidence in pharmacovigilance: extracting adverse drug reactions articles from MEDLINE to link them to case databases.

artículo científico publicado en 2006

Evolving from standard vocabularies to formal ontology for an information system dedicated to organ transplantation

artículo científico

Experiments in cross-language medical information retrieval using a mixing translation module

article

Exploring and visualizing multidimensional data in translational research platforms.

artículo científico publicado en 2016

Filtering Entities to Optimize Identification of Adverse Drug Reaction From Social Media: How Can the Number of Words Between Entities in the Messages Help?

artículo científico publicado en 2017

Finding patients using similarity measures in a rare diseases-oriented clinical data warehouse: Dr. Warehouse and the needle in the needle stack

artículo científico publicado en 2017

GO2PUB: Querying PubMed with semantic expansion of gene ontology terms

artículo científico

Grading glioma tumors using OWL-DL and NCI Thesaurus

artículo científico publicado en 2007

Improving a full-text search engine: the importance of negation detection and family history context to identify cases in a biomedical data warehouse

artículo científico publicado en 2016

Integrating Heterogeneous Biomedical Data for Cancer Research: the CARPEM infrastructure

artículo científico publicado en 2016

Integrating biological pathways in disease ontologies

artículo científico

Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research

artículo científico publicado en 2008

Integration of electronic resources and communication technologies during Clinical Reasoning Learning sessions.

artículo científico publicado en 2002

International Electronic Health Record-Derived COVID-19 Clinical Course Profiles: The 4CE Consortium

artículo científico publicado en 2020

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium

artículo científico publicado en 2020

Investigating subsumption in SNOMED CT: an exploration into large description logic-based biomedical terminologies

artículo científico publicado en 2007

Iron-related transcriptomic variations in Caco-2 cells: in silico perspectives

artículo científico

Issues in integrating epidemiology and research information in oncology: experience with ICD-O3 and the NCI Thesaurus.

artículo científico publicado en 2007

Issues in the classification of disease instances with ontologies.

artículo científico publicado en 2005

Knowledge acquisition from the UMLS sources: application to the description of surgical procedures.

artículo científico

Knowledge acquisition to qualify Unified Medical Language System interconceptual relationships.

artículo científico publicado en 2000

Knowledge representation in orthopedics: from conceptual modeling to nomenclatures using 'Orthonav'.

artículo científico publicado en 1995

Labeling for Big Data in radiation oncology: The Radiation Oncology Structures ontology

artículo científico publicado en 2018

Leveraging the EHR4CR platform to support patient inclusion in academic studies: challenges and lessons learned

artículo científico publicado en 2017

Looking for Anemia (and Other Disorders) in SNOMED CT: Comparison of Three Approaches and Practical Implications.

artículo científico publicado en 2010

MRI image artifact ontology: a proposed method for improved recognition

artículo científico publicado en 2012

Mapping BFO and DOLCE.

artículo científico

Mapping data elements to terminological resources for integrating biomedical data sources

artículo científico publicado en 2006

Mapping the UMLS Semantic Network into general ontologies.

artículo científico publicado en 2001

Medical Informatics Training and Research at Rennes University School of Medicine

artículo científico

Mining Adverse Drug Reactions in Social Media with Named Entity Recognition and Semantic Methods

artículo científico publicado en 2017

Modelling a decision-support system for oncology using rule-based and case-based reasoning methodologies.

artículo científico publicado en 2005

Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base

artículo científico publicado en 2003

Modelling of a case-based retrieval system for oncology.

artículo científico publicado en 2003

Natural language processing of radiology reports for the detection of thromboembolic diseases and clinically relevant incidental findings

artículo científico publicado en 2014

Non-lexical approaches to identifying associative relations in the gene ontology.

artículo científico publicado en 2005

OWL model of clinical trial eligibility criteria compatible with partially-known information

artículo científico publicado en 2013

Ontology and medical diagnosis

artículo científico

Partnering with patients in translational oncology research: ethical approach

artículo científico publicado en 2017

Personalized and automated remote monitoring of atrial fibrillation.

artículo científico

Phenome-wide association studies on a quantitative trait: application to TPMT enzyme activity and thiopurine therapy in pharmacogenomics

artículo científico publicado en 2013

Problem-based learning in medical informatics for undergraduate medical students: an experiment in two medical schools

artículo científico publicado en 2005

Proposal for a European Public Health Research Infrastructure for Sharing of health and Medical administrative data (PHRIMA).

artículo científico publicado en 2015

Remote Monitoring of Cardiac Implantable Devices: Ontology Driven Classification of the Alerts

artículo científico

Representation of roles in biomedical ontologies: a case study in functional genomics.

artículo científico publicado en 2002

Reviewing 741 patients records in two hours with FASTVISU.

artículo científico publicado en 2015

Sex differences in antihypertensive treatment in France among 17 856 patients in a tertiary hypertension unit

artículo científico publicado en 2018

Sharing medical data for patient path analysis with data mining method.

artículo científico publicado en 2001

The Adverse Drug Reactions From Patient Reports in Social Media Project: Protocol for an Evaluation Against a Gold Standard

scientific article published on 07 May 2019

The Diagnosis-Wide Landscape of Hospital-Acquired AKI.

artículo científico publicado en 2017

The French Virtual Medical University.

artículo científico

The Georges Pompidou University Hospital Clinical Data Warehouse: A 8-years follow-up experience

artículo científico publicado en 2017

The Ontology-Epistemology Divide: A Case Study in Medical Terminology

The directory of French biological resources centres/biobanks

artículo científico publicado en 2011

Toward a unified representation of findings in clinical radiology.

artículo científico

Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy: lessons learned from a prototype.

artículo científico publicado en 2002

Towards the automatic generation of biomedical sources schema.

artículo científico publicado en 2004

Translational research platforms integrating clinical and omics data: a review of publicly available solutions

artículo científico publicado en 2015

Two approaches to integrating phenotype and clinical information

artículo científico publicado en 2009

UMLF: a Unified Medical Lexicon for French.

artículo científico publicado en 2003

UMLF: a unified medical lexicon for French

article

Using Literature-Based Discovery to Explain Adverse Drug Effects

artículo científico publicado en 2016

Using Semantic Web Technologies for Clinical Trial Recruitment

artículo científico publicado en 2010

Using WordNet to improve the mapping of data elements to UMLS for data sources integration.

artículo científico publicado en 2006

Using regular expressions to extract information on pacemaker implantation procedures from clinical reports.

artículo científico publicado en 2008

Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine

artículo científico publicado en 2003

[Artificial intelligence applied to radiation oncology].

artículo científico publicado en 2017

[Vertebral trabecular network analysis on CT images]

artículo científico publicado en 2005

eSource for clinical trials: Implementation and evaluation of a standards-based approach in a real world trial

artículo científico publicado en 2017

Lista de obras de Anita Burgun

A Web Terminology Server Using UMLS for the Description of Medical Procedures ⬇️

A contextual coding system for transplantation and end stage diseases

A first evaluation of a pedagogical network for medical students at the University Hospital of Rennes.

A framework for comparing phenotype annotations of orthologous genes

A knowledge management platform for documentation of case reports in pharmacovigilance.

A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: the case of OBO disease ontologies

A network of web multimedia medical information servers for a medical school and university hospital.

A novel data-driven workflow combining literature and electronic health records to estimate comorbidities burden for a specific disease: a case study on autoimmune comorbidities in patients with celiac disease

A system that facilitates the orientation within procedure nomenclatures through a semantic approach ⬇️

A transversal approach to predict gene product networks from ontology-based similarity

A unified representation of findings in clinical radiology using the UMLS and DICOM.

A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm

Accessing and integrating data and knowledge for biomedical research.

Adverse Drug Reaction Identification and Extraction in Social Media: A Scoping Review

Aggregating UMLS semantic types for reducing conceptual complexity.

Aligning biomedical ontologies using lexical methods and the UMLS: the case of disease ontologies.

Aligning knowledge sources in the UMLS: methods, quantitative results, and applications.

Amplification of Terminologia anatomica by French language terms using Latin terms matching algorithm: a prototype for other language

An ontological analysis of medical Bayesian indicators of performance

An ontology-based annotation of cardiac implantable electronic devices to detect therapy changes in a national registry

Analyzing polysemous concepts from a clinical perspective: application to auditing concept categorization in the UMLS

Aspects of the Taxonomic Relation in the Biomedical Domain

Assessing the consistency of a biomedical terminology through lexical knowledge

Automated classification of free-text pathology reports for registration of incident cases of cancer.

Automatic computation of CHA2DS2-VASc score: information extraction from clinical texts for thromboembolism risk assessment.

Automatic concept extraction from spoken medical reports

Automatic enrichment of the unified medical language system starting from the ADM knowledge base.

Big Data and machine learning in radiation oncology: State of the art and future prospects

BioMeKe: an ontology-based biomedical knowledge extraction system devoted to transcriptome analysis.

Classifying diseases with respect to anatomy: a study in SNOMED CT

Clinical data integration model. Core interoperability ontology for research using primary care data.

Collaborative environment for clinical reasoning and distance learning sessions.

Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets

Combining voice recognition and automatic indexing of medical reports.

Comparing Drools and ontology reasoning approaches for telecardiology decision support.

Computer assisted medical diagnosis using the Web.

Creating a magnetic resonance imaging ontology.

Desiderata for domain reference ontologies in biomedicine

Design considerations for an ontology in the domain of organ failure and transplantation.

Designing a sub-set of the UMLS knowledge base applied to a clinical domain: methods and evaluation.

Detailed clinical modelling approach to data extraction from heterogeneous data sources for clinical research

Detection of Cases of Noncompliance to Drug Treatment in Patient Forum Posts: Topic Model Approach (Preprint)

Detection of Cases of Noncompliance to Drug Treatment in Patient Forum Posts: Topic Model Approach.

Developing the ontological foundations of a terminological system for end-stage diseases, organ failure, dialysis and transplantation

Discussion of "biomedical ontologies: toward scientific debate".

Documentation in pharmacovigilance: using an ontology to extend and normalize Pubmed queries.

Erratum to: Partnering with patients in translational oncology research: ethical approach.

Evaluation of Internet Social Networks using Net scoring Tool: A Case Study in Adverse Drug Reaction Mining

Evaluation of WordNet as a source of lay knowledge for molecular biology and genetic diseases: a feasibility study

Evaluation of the Unified Medical Language System as a Medical Knowledge Source ⬇️

Evidence in pharmacovigilance: extracting adverse drug reactions articles from MEDLINE to link them to case databases.

Evolving from standard vocabularies to formal ontology for an information system dedicated to organ transplantation

Experiments in cross-language medical information retrieval using a mixing translation module

Exploring and visualizing multidimensional data in translational research platforms.

Filtering Entities to Optimize Identification of Adverse Drug Reaction From Social Media: How Can the Number of Words Between Entities in the Messages Help?

Finding patients using similarity measures in a rare diseases-oriented clinical data warehouse: Dr. Warehouse and the needle in the needle stack

GO2PUB: Querying PubMed with semantic expansion of gene ontology terms

Grading glioma tumors using OWL-DL and NCI Thesaurus

Improving a full-text search engine: the importance of negation detection and family history context to identify cases in a biomedical data warehouse

Integrating Heterogeneous Biomedical Data for Cancer Research: the CARPEM infrastructure

Integrating biological pathways in disease ontologies

Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research

Integration of electronic resources and communication technologies during Clinical Reasoning Learning sessions.

International Electronic Health Record-Derived COVID-19 Clinical Course Profiles: The 4CE Consortium

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium

Investigating subsumption in SNOMED CT: an exploration into large description logic-based biomedical terminologies

Iron-related transcriptomic variations in Caco-2 cells: in silico perspectives

Issues in integrating epidemiology and research information in oncology: experience with ICD-O3 and the NCI Thesaurus.

Issues in the classification of disease instances with ontologies.

Knowledge acquisition from the UMLS sources: application to the description of surgical procedures.

Knowledge acquisition to qualify Unified Medical Language System interconceptual relationships.

Knowledge representation in orthopedics: from conceptual modeling to nomenclatures using 'Orthonav'.

Labeling for Big Data in radiation oncology: The Radiation Oncology Structures ontology

Leveraging the EHR4CR platform to support patient inclusion in academic studies: challenges and lessons learned

Looking for Anemia (and Other Disorders) in SNOMED CT: Comparison of Three Approaches and Practical Implications.

MRI image artifact ontology: a proposed method for improved recognition

Mapping BFO and DOLCE.

Mapping data elements to terminological resources for integrating biomedical data sources

Mapping the UMLS Semantic Network into general ontologies.