Lista de obras - Nadine Ziemert - Dominio Público Uruguay

A community resource for paired genomic and metabolomic data mining

artículo científico publicado en 2021

A rapid and efficient strategy to identify and recover biosynthetic gene clusters from soil metagenomes

artículo científico publicado en 2022

ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining

artículo científico publicado en 2020

ARTS-DB: a database for antibiotic resistant targets

artículo científico publicado en 2022

An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria

artículo científico publicado en 2016

Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites

scientific article published in Scientific Reports

Antibiotic drug discovery.

artículo científico publicado en 2016

Applied evolution: phylogeny-based approaches in natural products research

scientific article published on 02 September 2019

Artificial intelligence for natural product drug discovery ⬇️

scientific article from 2023

Assessing the Efficiency of Cultivation Techniques To Recover Natural Product Biosynthetic Gene Populations from Sediment

article

Author Correction: Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes

artículo científico publicado en 2022

AutoMLST: an automated web server for generating multi-locus species trees highlighting natural product potential

artículo científico publicado en 2019

Challenges and triumphs to genomics-based natural product discovery

artículo científico publicado en 2013

Comparative Genomics and Metabolomics in the Genus Nocardia

scientific article published on 02 June 2020

Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.

artículo científico publicado en 2018

Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes

artículo científico publicado en 2022

Direct capture and heterologous expression of Salinispora natural product genes for the biosynthesis of enterocin.

artículo científico publicado en 2014

Discovering cryptic natural products by substrate manipulation

artículo científico publicado en 2024

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

artículo científico publicado en 2014

Exploiting the natural diversity of microviridin gene clusters for discovery of novel tricyclic depsipeptides ⬇️

artículo científico publicado en 2010

Function-related replacement of bacterial siderophore pathways. ⬇️

artículo científico publicado en 2017

Genomic insights into specialized metabolism in the marine actinomycete Salinispora.

artículo científico publicado en 2017

Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules ⬇️

artículo científico publicado en 2013

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium

artículo científico publicado en 2008

Identification of a novel aminopolycarboxylic acid siderophore gene cluster encoding the biosynthesis of ethylenediaminesuccinic acid hydroxyarginine (EDHA).

artículo científico publicado en 2018

Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics

scientific article published on 13 June 2019

Leader peptide and a membrane protein scaffold guide the biosynthesis of the tricyclic peptide microviridin

artículo científico publicado en 2011

MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

artículo científico publicado en 2024

Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity

artículo científico publicado en 2021

Microcyclamide biosynthesis in two strains of Microcystis aeruginosa: from structure to genes and vice versa ⬇️

artículo científico publicado en 2008

Minimum Information about a Biosynthetic Gene cluster.

artículo científico publicado en 2015

Mining Bacterial Genomes for Secondary Metabolite Gene Clusters.

artículo científico publicado en 2017

Mining Indonesian Microbial Biodiversity for Novel Natural Compounds by a Combined Genome Mining and Molecular Networking Approach

artículo científico publicado en 2021

Modular Fragment Synthesis and Bioinformatic Analysis Propose a Revised Vancoresmycin Stereoconfiguration

artículo científico publicado en 2020

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species ⬇️

artículo científico publicado en 2015

New Nocobactin Derivatives with Antimuscarinic Activity, Terpenibactins A-C, Revealed by Genome Mining of Nocardia terpenica IFM 0406

artículo científico publicado en 2020

Phylogenetic approaches to natural product structure prediction

artículo científico publicado en 2012

Recovery of the Peptidoglycan Turnover Product Released by the Autolysin Atl in Involves the Phosphotransferase System Transporter MurP and the Novel 6-phospho--acetylmuramidase MupG

artículo científico publicado en 2018

Ribosomal synthesis of tricyclic depsipeptides in bloom-forming cyanobacteria

artículo científico publicado en 2008

SYN-View: A Phylogeny-Based Synteny Exploration Tool for the Identification of Gene Clusters Linked to Antibiotic Resistance

artículo científico publicado en 2020

Salinipyrone and Pacificanone Are Biosynthetic By-products of the Rosamicin Polyketide Synthase.

artículo científico publicado en 2015

Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters.

artículo científico publicado en 2016

Structures of a non-ribosomal peptide synthetase condensation domain suggest the basis of substrate selectivity

artículo científico publicado en 2021

The ADEP Biosynthetic Gene Cluster in Streptomyces hawaiiensis NRRL 15010 Reveals an Accessory clpP Gene as a Novel Antibiotic Resistance Factor ⬇️

scientific article published on 01 October 2019

The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery

artículo científico publicado en 2017

The confluence of big data and evolutionary genome mining for the discovery of natural products

artículo científico

The evolution of genome mining in microbes - a review.

artículo científico publicado en 2016

The genus as a model microorganism for bioactive natural product discovery

artículo científico publicado en 2020

The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity

artículo científico publicado en 2012

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

scientific article published on 01 July 2019

Lista de obras de Nadine Ziemert

A community resource for paired genomic and metabolomic data mining

A rapid and efficient strategy to identify and recover biosynthetic gene clusters from soil metagenomes

ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining

ARTS-DB: a database for antibiotic resistant targets

An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria

Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites

Antibiotic drug discovery.

Applied evolution: phylogeny-based approaches in natural products research

Artificial intelligence for natural product drug discovery ⬇️

Assessing the Efficiency of Cultivation Techniques To Recover Natural Product Biosynthetic Gene Populations from Sediment

Author Correction: Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes

AutoMLST: an automated web server for generating multi-locus species trees highlighting natural product potential

Challenges and triumphs to genomics-based natural product discovery

Comparative Genomics and Metabolomics in the Genus Nocardia

Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.

Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes

Direct capture and heterologous expression of Salinispora natural product genes for the biosynthesis of enterocin.

Discovering cryptic natural products by substrate manipulation

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

Exploiting the natural diversity of microviridin gene clusters for discovery of novel tricyclic depsipeptides ⬇️

Function-related replacement of bacterial siderophore pathways. ⬇️

Genomic insights into specialized metabolism in the marine actinomycete Salinispora.

Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules ⬇️

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium

Identification of a novel aminopolycarboxylic acid siderophore gene cluster encoding the biosynthesis of ethylenediaminesuccinic acid hydroxyarginine (EDHA).

Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics

Leader peptide and a membrane protein scaffold guide the biosynthesis of the tricyclic peptide microviridin

MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity

Microcyclamide biosynthesis in two strains of Microcystis aeruginosa: from structure to genes and vice versa ⬇️

Minimum Information about a Biosynthetic Gene cluster.

Mining Bacterial Genomes for Secondary Metabolite Gene Clusters.

Mining Indonesian Microbial Biodiversity for Novel Natural Compounds by a Combined Genome Mining and Molecular Networking Approach

Modular Fragment Synthesis and Bioinformatic Analysis Propose a Revised Vancoresmycin Stereoconfiguration

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species ⬇️

New Nocobactin Derivatives with Antimuscarinic Activity, Terpenibactins A-C, Revealed by Genome Mining of Nocardia terpenica IFM 0406

Phylogenetic approaches to natural product structure prediction

Recovery of the Peptidoglycan Turnover Product Released by the Autolysin Atl in Involves the Phosphotransferase System Transporter MurP and the Novel 6-phospho--acetylmuramidase MupG

Ribosomal synthesis of tricyclic depsipeptides in bloom-forming cyanobacteria

SYN-View: A Phylogeny-Based Synteny Exploration Tool for the Identification of Gene Clusters Linked to Antibiotic Resistance

Salinipyrone and Pacificanone Are Biosynthetic By-products of the Rosamicin Polyketide Synthase.

Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters.

Structures of a non-ribosomal peptide synthetase condensation domain suggest the basis of substrate selectivity

The ADEP Biosynthetic Gene Cluster in Streptomyces hawaiiensis NRRL 15010 Reveals an Accessory clpP Gene as a Novel Antibiotic Resistance Factor ⬇️

The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery

The confluence of big data and evolutionary genome mining for the discovery of natural products

The evolution of genome mining in microbes - a review.

The genus as a model microorganism for bioactive natural product discovery

The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline