Lista de obras - Mario Looso - Dominio Público Uruguay

A Comprehensive Transcriptomic and Proteomic Analysis of Hydra Head Regeneration

artículo científico publicado en 2015

A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration

artículo científico publicado en 2013

A microarray analysis of gene expression patterns during early phases of newt lens regeneration ⬇️

artículo científico publicado el 28 de enero de 2013

A reverse signaling pathway downstream of Sema4A controls cell migration via Scrib.

artículo científico publicado en 2016

A whole organism small molecule screen identifies novel regulators of pancreatic endocrine development

scientific article published on 24 July 2019

ADMIRE: analysis and visualization of differential methylation in genomic regions using the Infinium HumanMethylation450 Assay

artículo científico publicado en 2015

ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation

artículo científico publicado en 2020

Advanced identification of proteins in uncharacterized proteomes by pulsed in vivo stable isotope labeling-based mass spectrometry

artículo científico publicado en 2010

Analysis of newly established EST databases reveals similarities between heart regeneration in newt and fish

artículo científico publicado en 2010

Antigen presentation plays positive roles in the regenerative response to cardiac injury in zebrafish

artículo científico publicado en 2024

Author Correction: Single-cell profiling reveals heterogeneity and functional patterning of GPCR expression in the vascular system

scientific article published on 28 March 2019

Connect-four: genomic analyses of regenerating stem cells identifies zygotic Dux factors as tumor initiators

scientific article published on 08 February 2019

Data mining in newt-omics, the repository for omics data from the newt

artículo científico publicado en 2015

ErbB-2 signals through Plexin-B1 to promote breast cancer metastasis

artículo científico publicado en 2012

High mobility group protein-mediated transcription requires DNA damage marker γ-H2AX.

artículo científico publicado en 2015

Identification of the orphan gene Prod 1 in basal and other salamander families

artículo científico publicado en 2015

Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses

artículo científico publicado en 2013

Interleukin-11 signaling promotes cellular reprogramming and limits fibrotic scarring during tissue regeneration

artículo científico publicado en 2021

LimiTT: link miRNAs to targets

artículo científico publicado en 2016

Long Noncoding RNA MANTIS Facilitates Endothelial Angiogenic Function

artículo científico publicado en 2017

Long noncoding RNA LISPR1 is required for S1P signaling and endothelial cell function

artículo científico publicado en 2018

MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files

artículo científico publicado en 2019

MIRPIPE: quantification of microRNAs in niche model organisms

artículo científico publicado en 2014

Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease

artículo científico publicado en 2018

Newt-omics: a comprehensive repository for omics data from the newt Notophthalmus viridescens

artículo científico publicado en 2011

Next-generation sequencing for hypothesis-free genomic detection of invasive tropical infections in poly-microbially contaminated, formalin-fixed, paraffin-embedded tissue samples - a proof-of-principle assessment

artículo científico publicado en 2019

On marathons and Sprints: an integrated quantitative proteomics and transcriptomics analysis of differences between slow and fast muscle fibers

artículo científico publicado en 2011

Oncogenic Amplification of Zygotic Dux Factors in Regenerating p53-Deficient Muscle Stem Cells Defines a Molecular Cancer Subtype

artículo científico publicado en 2018

Opening the genetic toolbox of niche model organisms with high throughput techniques: novel proteins in regeneration as a case study

artículo científico publicado en 2014

PAFAH1B1 and the lncRNA NONHSAT073641 maintain an angiogenic phenotype in human endothelial cells.

artículo científico publicado en 2016

PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms.

artículo científico publicado en 2010

Pleiotropic effects of laminar flow and statins depend on the Krüppel-like factor-induced lncRNA MANTIS

scientific article published on 01 August 2019

Prmt5 is a regulator of muscle stem cell expansion in adult mice.

artículo científico publicado en 2015

Promoter hypermethylation as a mechanism for Lamin A/C silencing in a subset of neuroblastoma cells.

artículo científico publicado en 2017

Proteotranscriptomics Reveal Signaling Networks in the Ovarian Cancer Microenvironment

artículo científico publicado en 2017

Pulmonary endothelial cell DNA methylation signature in pulmonary arterial hypertension

artículo científico publicado en 2017

Quantitative analysis of the TNF-α-induced phosphoproteome reveals AEG-1/MTDH/LYRIC as an IKKβ substrate

artículo científico publicado en 2015

RBM24 is a major regulator of muscle-specific alternative splicing

artículo científico publicado en 2014

RNA-Seq analysis of isolated satellite cells in Prmt5 deficient mice.

artículo científico publicado en 2015

Reciprocal analyses in zebrafish and medaka reveal that harnessing the immune response promotes cardiac regeneration

artículo científico publicado en 2017

Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement

artículo científico publicado en 2018

Single-cell profiling reveals GPCR heterogeneity and functional patterning during neuroinflammation

artículo científico publicado en 2017

Single-cell profiling reveals heterogeneity and functional patterning of GPCR expression in the vascular system

artículo científico publicado en 2017

Spiked-in pulsed in vivo labeling identifies a new member of the CCN family in regenerating newt hearts.

artículo científico publicado en 2012

Targeted Ablation of Periostin-Expressing Activated Fibroblasts Prevents Adverse Cardiac Remodeling in Mice

artículo científico publicado en 2016

The Histone Demethylase PHF8 Is Essential for Endothelial Cell Migration

artículo científico publicado en 2016

The Isl1/Ldb1 Complex Orchestrates Genome-wide Chromatin Organization to Instruct Differentiation of Multipotent Cardiac Progenitors.

artículo científico publicado en 2015

The NADPH organizers NoxO1 and p47phox are both mediators of diabetes-induced vascular dysfunction in mice

artículo científico publicado en 2017

The histone demethylase PHF8 facilitates alternative splicing of the histocompatibility antigen HLA-G

scientific article published on 27 February 2019

The potassium channel KCNJ13 is essential for smooth muscle cytoskeletal organization during mouse tracheal tubulogenesis

artículo científico publicado en 2018

Transcriptome analysis of newt lens regeneration reveals distinct gradients in gene expression patterns.

artículo científico publicado en 2013

UROPA GUI: A web platform for genomic region annotation

UROPA: a tool for Universal RObust Peak Annotation

artículo científico publicado en 2017

WIlsON: Web-based Interactive Omics VisualizatioN.

artículo científico publicado en 2019

aPKC controls endothelial growth by modulating c-Myc via FoxO1 DNA-binding ability

scientific article published in Nature Communications

multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets

scientific article published on 09 September 2020

Lista de obras de Mario Looso

A Comprehensive Transcriptomic and Proteomic Analysis of Hydra Head Regeneration

A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration

A microarray analysis of gene expression patterns during early phases of newt lens regeneration ⬇️

A reverse signaling pathway downstream of Sema4A controls cell migration via Scrib.

A whole organism small molecule screen identifies novel regulators of pancreatic endocrine development

ADMIRE: analysis and visualization of differential methylation in genomic regions using the Infinium HumanMethylation450 Assay

ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation

Advanced identification of proteins in uncharacterized proteomes by pulsed in vivo stable isotope labeling-based mass spectrometry

Analysis of newly established EST databases reveals similarities between heart regeneration in newt and fish

Antigen presentation plays positive roles in the regenerative response to cardiac injury in zebrafish

Author Correction: Single-cell profiling reveals heterogeneity and functional patterning of GPCR expression in the vascular system

Connect-four: genomic analyses of regenerating stem cells identifies zygotic Dux factors as tumor initiators

Data mining in newt-omics, the repository for omics data from the newt

ErbB-2 signals through Plexin-B1 to promote breast cancer metastasis

High mobility group protein-mediated transcription requires DNA damage marker γ-H2AX.

Identification of the orphan gene Prod 1 in basal and other salamander families

Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses

Interleukin-11 signaling promotes cellular reprogramming and limits fibrotic scarring during tissue regeneration

LimiTT: link miRNAs to targets

Long Noncoding RNA MANTIS Facilitates Endothelial Angiogenic Function

Long noncoding RNA LISPR1 is required for S1P signaling and endothelial cell function

MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files

MIRPIPE: quantification of microRNAs in niche model organisms

Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease

Newt-omics: a comprehensive repository for omics data from the newt Notophthalmus viridescens

Next-generation sequencing for hypothesis-free genomic detection of invasive tropical infections in poly-microbially contaminated, formalin-fixed, paraffin-embedded tissue samples - a proof-of-principle assessment

On marathons and Sprints: an integrated quantitative proteomics and transcriptomics analysis of differences between slow and fast muscle fibers

Oncogenic Amplification of Zygotic Dux Factors in Regenerating p53-Deficient Muscle Stem Cells Defines a Molecular Cancer Subtype

Opening the genetic toolbox of niche model organisms with high throughput techniques: novel proteins in regeneration as a case study

PAFAH1B1 and the lncRNA NONHSAT073641 maintain an angiogenic phenotype in human endothelial cells.

PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms.

Pleiotropic effects of laminar flow and statins depend on the Krüppel-like factor-induced lncRNA MANTIS

Prmt5 is a regulator of muscle stem cell expansion in adult mice.

Promoter hypermethylation as a mechanism for Lamin A/C silencing in a subset of neuroblastoma cells.

Proteotranscriptomics Reveal Signaling Networks in the Ovarian Cancer Microenvironment

Pulmonary endothelial cell DNA methylation signature in pulmonary arterial hypertension

Quantitative analysis of the TNF-α-induced phosphoproteome reveals AEG-1/MTDH/LYRIC as an IKKβ substrate

RBM24 is a major regulator of muscle-specific alternative splicing

RNA-Seq analysis of isolated satellite cells in Prmt5 deficient mice.

Reciprocal analyses in zebrafish and medaka reveal that harnessing the immune response promotes cardiac regeneration

Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement

Single-cell profiling reveals GPCR heterogeneity and functional patterning during neuroinflammation

Single-cell profiling reveals heterogeneity and functional patterning of GPCR expression in the vascular system

Spiked-in pulsed in vivo labeling identifies a new member of the CCN family in regenerating newt hearts.

Targeted Ablation of Periostin-Expressing Activated Fibroblasts Prevents Adverse Cardiac Remodeling in Mice

The Histone Demethylase PHF8 Is Essential for Endothelial Cell Migration

The Isl1/Ldb1 Complex Orchestrates Genome-wide Chromatin Organization to Instruct Differentiation of Multipotent Cardiac Progenitors.

The NADPH organizers NoxO1 and p47phox are both mediators of diabetes-induced vascular dysfunction in mice

The histone demethylase PHF8 facilitates alternative splicing of the histocompatibility antigen HLA-G

The potassium channel KCNJ13 is essential for smooth muscle cytoskeletal organization during mouse tracheal tubulogenesis

Transcriptome analysis of newt lens regeneration reveals distinct gradients in gene expression patterns.

UROPA GUI: A web platform for genomic region annotation

UROPA: a tool for Universal RObust Peak Annotation

WIlsON: Web-based Interactive Omics VisualizatioN.

aPKC controls endothelial growth by modulating c-Myc via FoxO1 DNA-binding ability

multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets