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Lista de obras de José M. Fernández

A FAIRification roadmap for ELIXIR Software Management Plans

artículo científico publicado en 2022

An expanded evaluation of protein function prediction methods shows an improvement in accuracy ⬇️

artículo científico publicado en 2016

BioHackEU23: FAIR Workflow Execution with WfExS and Workflow Run Crate

Bioinformatic Software Developments in Spain

Bioinformatics methods for the analysis of expression arrays: data clustering and information extraction

artículo científico publicado en 2002

CARGO: a web portal to integrate customized biological information

artículo científico publicado en 2007

COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain

publication published on 30 November 2021

ELIXIR Software Management Plan for Life Sciences

FUN-L: gene prioritization for RNAi screens

artículo científico

Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

artículo científico publicado en 2017

Integration of biological data by kernels on graph nodes allows prediction of new genes involved in mitotic chromosome condensation

artículo científico publicado en 2014

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

artículo científico publicado en 2008

Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships

artículo científico publicado en 2020

Packaging research artefacts with RO-Crate

artículo científico publicado en 2022

RD-Connect: Data sharing and analysis for rare disease research within the integrated platform and through GA4GH beacon and matchmaker exchange

article

RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data

artículo científico publicado en 2016

RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data

RUbioSeq: a suite of parallelized pipelines to automate exome variation and bisulfite-seq analyses

artículo científico publicado en 2013

Recommendations for the FAIRification of genomic track metadata

artículo científico publicado en 2021

Recording provenance of workflow runs with RO-Crate

artículo científico publicado en 2024

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

artículo científico publicado en 2011

The BLUEPRINT Data Analysis Portal.

artículo científico publicado en 2016

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

scientific article published on 19 November 2019

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

artículo científico publicado en 2010

The EMBRACE web service collection

artículo científico publicado en 2010

The Quest for Orthologs benchmark service and consensus calls in 2020

scientific article published on 06 May 2020

The REGIA database (RegiaDB): status, limitations and future developments

artículo científico publicado en 2002

Unveiling the molecular basis of disease co-occurrence: towards personalized comorbidity profiles

WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows

artículo científico publicado en 2023

YAdumper: extracting and translating large information volumes from relational databases to structured flat files

artículo científico publicado en 2004

iHOP Web Services Family

iHOP web services

artículo científico publicado en 2007

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