Lista de obras - Jan P. Meier-Kolthoff - Dominio Público Uruguay

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

artículo científico

100-year-old enigma solved: identification, genomic characterization and biogeography of the yet uncultured Planctomyces bekefii

artículo científico publicado en 2019

A publicly accessible database for Clostridioides difficile genome sequences supports tracing of transmission chains and epidemics

artículo científico publicado en 2020

A single-cell genomics pipeline for environmental microbial eukaryotes

Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes

artículo científico publicado en 2019

Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria

artículo científico publicado en 2020

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa

artículo científico publicado en 2007

COPYCAT : cophylogenetic analysis tool

article

Cobaviruses – a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems

artículo científico publicado en 2019

Comparative genomics of biotechnologically important yeasts

artículo científico publicado en 2016

Comparative genomics suggests mechanisms of genetic adaptation towards the catabolism of the phenylurea herbicide linuron in Variovorax

artículo científico publicado en 2020

Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 eme

artículo científico publicado en 2016

Complete genome sequence of DSM 30083(T), the type strain (U5/41(T)) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy

artículo científico publicado en 2014

Correction for Barka et al., Taxonomy, Physiology, and Natural Products of Actinobacteria

artículo científico publicado en 2016

Correction: Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex

artículo científico publicado en 2016

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes.

artículo científico publicado en 2018

Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

scholarly article published in Nature Biotechnology

Erratum: Corrigendum: The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota

artículo científico publicado en 2016

First genome sequences of Achromobacter phages reveal new members of the N4 family

artículo científico publicado en 2014

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

artículo científico publicado en 2013

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio

artículo científico publicado en 2013

Genome sequence-based species delimitation with confidence intervals and improved distance functions

artículo científico publicado en 2013

Genome-Based Taxonomic Classification of Bacteroidetes

artículo científico publicado en 2016

Genome-Based Taxonomic Classification of the Phylum

article published in 2018

Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae

artículo científico publicado en 2017

Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential

artículo científico publicado en 2018

Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species

scientific article published on 08 January 2020

Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex

artículo científico publicado en 2016

Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio

artículo científico publicado en 2017

Genomic insights into the taxonomic status of the Bacillus cereus group

artículo científico publicado en 2015

High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2(T) (DSM 21788(T)), a valuable source of polysaccharide decomposing enzymes

artículo científico publicado en 2015

High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T)

artículo científico publicado en 2016

Highly parallelized inference of large genome-based phylogenies

scholarly article by Jan P Meier-Kolthoff et al published 7 August 2013 in Concurrency and Computation: Practice and Experience

Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets

artículo científico publicado en 2016

Investigation of recombination-intense viral groups and their genes in the Earth's virome

artículo científico publicado en 2018

Large-Scale Co-Phylogenetic Analysis on the Grid

scholarly article published January 2009

Large-Scale Co-Phylogenetic Analysis on the Grid

scholarly article

List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ

scientific article published on 23 July 2020

Panoramic Insights into Microevolution and Macroevolution of A Prevotella copri-containing Lineage in Primate Guts

Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade).

artículo científico publicado en 2013

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order ) Calls for the Reclassification of Members at the Genus and Species Levels

scientific article published in 2018

Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae

artículo científico publicado en 2016

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats

artículo científico publicado en 2017

Prevotella illustrans sp. nov., derived from human oropharyngeal abscess puncture fluid

artículo científico

Proposal of a type strain for Frankia alni (Woronin 1866) Von Tubeuf 1895, emended description of Frankia alni, and recognition of Frankia casuarinae sp. nov. and Frankia elaeagni sp. nov.

artículo científico publicado en 2016

Reclassification of Haloactinobacterium glacieicola as Occultella glacieicola gen. nov., comb. nov., of Haloactinobacterium album as Ruania alba comb. nov, with an emended description of the genus Ruania, recognition that the genus names Haloactinoba

scientific article published in 2021

Sequence-based analysis of the genus Ruminococcus resolves its phylogeny and reveals strong host association.

scientific article published on 12 December 2016

Sphingomonas aliaeris sp. nov., a new species isolated from pork steak packed under modified atmosphere

artículo científico publicado en 2021

Still Something to Discover: Novel Insights intoEscherichia coli Phage Diversity and Taxonomy.

artículo científico publicado en 2019

Streptomyces jeddahensis sp. nov., an oleaginous bacterium isolated from desert soil

artículo científico publicado en 2017

TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes

artículo científico publicado en 2022

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

Taxonomic use of DNA G+C content and DNA-DNA hybridization in the genomic age.

artículo científico publicado en 2014

The Biofilm Inhibitor Carolacton Enters Gram-Negative Cells: Studies Using a TolC-Deficient Strain of Escherichia coli

artículo científico publicado en 2017

Trajectories and Drivers of Genome Evolution in Surface-Associated Marine Phaeobacter

artículo científico publicado en 2017

VICTOR: Genome-based Phylogeny and Classification of Prokaryotic Viruses

scholarly article published 11 February 2017

VICTOR: genome-based phylogeny and classification of prokaryotic viruses

artículo científico publicado en 2017

Welcher Coli ist ein Coli? Sequenzierung des Typstamms von Escherichia coli

artículo científico publicado en 2015

When should a DDH experiment be mandatory in microbial taxonomy?

artículo científico publicado en 2013

Whole genome-based taxonomy of Shewanella and Parashewanella

scientific article published in 2022

Whole-Genome Sequencing Redefines Shewanella Taxonomy

scientific article published on 28 August 2019

Lista de obras de Jan P. Meier-Kolthoff

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

100-year-old enigma solved: identification, genomic characterization and biogeography of the yet uncultured Planctomyces bekefii

A publicly accessible database for Clostridioides difficile genome sequences supports tracing of transmission chains and epidemics

A single-cell genomics pipeline for environmental microbial eukaryotes

Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes

Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa

COPYCAT : cophylogenetic analysis tool

Cobaviruses – a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems

Comparative genomics of biotechnologically important yeasts

Comparative genomics suggests mechanisms of genetic adaptation towards the catabolism of the phenylurea herbicide linuron in Variovorax

Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 eme

Complete genome sequence of DSM 30083(T), the type strain (U5/41(T)) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy

Correction for Barka et al., Taxonomy, Physiology, and Natural Products of Actinobacteria

Correction: Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes.

Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

Erratum: Corrigendum: The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota

First genome sequences of Achromobacter phages reveal new members of the N4 family

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio

Genome sequence-based species delimitation with confidence intervals and improved distance functions

Genome-Based Taxonomic Classification of Bacteroidetes

Genome-Based Taxonomic Classification of the Phylum

Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae

Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential

Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species

Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex

Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio

Genomic insights into the taxonomic status of the Bacillus cereus group

High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2(T) (DSM 21788(T)), a valuable source of polysaccharide decomposing enzymes

High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T)

Highly parallelized inference of large genome-based phylogenies

Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets

Investigation of recombination-intense viral groups and their genes in the Earth's virome

Large-Scale Co-Phylogenetic Analysis on the Grid

Large-Scale Co-Phylogenetic Analysis on the Grid

List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ

Panoramic Insights into Microevolution and Macroevolution of A Prevotella copri-containing Lineage in Primate Guts

Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade).

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order ) Calls for the Reclassification of Members at the Genus and Species Levels

Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats

Prevotella illustrans sp. nov., derived from human oropharyngeal abscess puncture fluid

Proposal of a type strain for Frankia alni (Woronin 1866) Von Tubeuf 1895, emended description of Frankia alni, and recognition of Frankia casuarinae sp. nov. and Frankia elaeagni sp. nov.

Reclassification of Haloactinobacterium glacieicola as Occultella glacieicola gen. nov., comb. nov., of Haloactinobacterium album as Ruania alba comb. nov, with an emended description of the genus Ruania, recognition that the genus names Haloactinoba

Sequence-based analysis of the genus Ruminococcus resolves its phylogeny and reveals strong host association.

Sphingomonas aliaeris sp. nov., a new species isolated from pork steak packed under modified atmosphere

Still Something to Discover: Novel Insights intoEscherichia coli Phage Diversity and Taxonomy.

Streptomyces jeddahensis sp. nov., an oleaginous bacterium isolated from desert soil

TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

Taxonomic use of DNA G+C content and DNA-DNA hybridization in the genomic age.

The Biofilm Inhibitor Carolacton Enters Gram-Negative Cells: Studies Using a TolC-Deficient Strain of Escherichia coli

Trajectories and Drivers of Genome Evolution in Surface-Associated Marine Phaeobacter

VICTOR: Genome-based Phylogeny and Classification of Prokaryotic Viruses

VICTOR: genome-based phylogeny and classification of prokaryotic viruses

Welcher Coli ist ein Coli? Sequenzierung des Typstamms von Escherichia coli

When should a DDH experiment be mandatory in microbial taxonomy?

Whole genome-based taxonomy of Shewanella and Parashewanella

Whole-Genome Sequencing Redefines Shewanella Taxonomy