Lista de obras - Yvan Saeys - Dominio Público Uruguay

A Murine Intestinal Intraepithelial NKp46-Negative Innate Lymphoid Cell Population Characterized by Group 1 Properties.

artículo científico publicado en 2017

A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes.

artículo científico publicado en 2015

A cell atlas of human thymic development defines T cell repertoire formation

artículo científico publicado en 2020

A comparison of single-cell trajectory inference methods

scientific article published on 01 April 2019

A greedy, graph-based algorithm for the alignment of multiple homologous gene lists

artículo científico publicado en 2011

A review of estimation of distribution algorithms in bioinformatics

artículo científico publicado en 2008

An integrated network of Arabidopsis growth regulators and its use for gene prioritization

artículo científico publicado en 2015

An interactive ImageJ plugin for semi-automated image denoising in electron microscopy

artículo científico publicado en 2020

An overview of state-of-the-art image restoration in electron microscopy

artículo científico publicado en 2018

Bone marrow-derived monocytes give rise to self-renewing and fully differentiated Kupffer cells

artículo científico publicado en 2016

Building genomic profiles for uncovering segmental homology in the twilight zone

artículo científico publicado en 2004

CATCh, an ensemble classifier for chimera detection in 16S rRNA sequencing studies

artículo científico publicado en 2014

Challenges in translational machine learning

artículo científico publicado en 2022

Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing

artículo científico publicado en 2015

Classification of Human White Blood Cells Using Machine Learning for Stain-Free Imaging Flow Cytometry

artículo científico publicado en 2019

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

scientific article published on 16 February 2022

Computational analysis of multimorbidity between asthma, eczema and rhinitis

artículo científico publicado en 2017

Discriminative and informative features for biomolecular text mining with ensemble feature selection

artículo científico publicado en 2010

Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction

artículo científico publicado en 2003

Fibrotic enzymes modulate wound-induced skin tumorigenesis

artículo científico publicado en 2021

FloReMi: Flow density survival regression using minimal feature redundancy

artículo científico publicado en 2015

FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

artículo científico publicado en 2015

FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA.

artículo científico publicado en 2008

GATA1-Deficient Dendritic Cells Display Impaired CCL21-Dependent Migration toward Lymph Nodes Due to Reduced Levels of Polysialic Acid.

artículo científico publicado en 2016

Generic eukaryotic core promoter prediction using structural features of DNA.

artículo científico publicado en 2007

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

artículo científico publicado en 2006

GenomeView: a next-generation genome browser

artículo científico publicado en 2012

HIGH-PRECISION BIO-MOLECULAR EVENT EXTRACTION FROM TEXT USING PARALLEL BINARY CLASSIFIERS

In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists

artículo científico publicado en 2007

Large-scale structural analysis of the core promoter in mammalian and plant genomes

artículo científico publicado en 2005

Macrophages are metabolically heterogeneous within the tumor microenvironment

artículo científico publicado en 2021

Mechanical strain determines the site-specific localization of inflammation and tissue damage in arthritis

artículo científico publicado en 2018

Mechanisms of the Development of Allergy (MeDALL): Introducing novel concepts in allergy phenotypes

artículo científico publicado en 2017

NIMEFI: gene regulatory network inference using multiple ensemble feature importance algorithms

artículo científico publicado en 2014

Netter: re-ranking gene network inference predictions using structural network properties

artículo científico publicado en 2016

NicheNet: modeling intercellular communication by linking ligands to target genes

scientific article published on 09 December 2019

Operational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures

artículo científico publicado en 2022

PeacoQC: Peak-based selection of high quality cytometry data

Phenotyping asthma, rhinitis and eczema in MeDALL population-based birth cohorts: an allergic comorbidity cluster

artículo científico publicado en 2015

ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles

artículo científico publicado en 2008

Radiation-induced alternative transcription and splicing events and their applicability to practical biodosimetry

artículo científico publicado en 2016

Robust biomarker identification for cancer diagnosis with ensemble feature selection methods

artículo científico publicado en 2009

Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors ⬇️

artículo científico publicado en 2020

SpliceMachine: predicting splice sites from high-dimensional local context representations

artículo científico publicado en 2004

Stabilization of human whole blood samples for multi-center and retrospective immunophenotyping studies

artículo científico publicado en 2020

Statistical interpretation of machine learning-based feature importance scores for biomarker discovery ⬇️

artículo científico publicado el 25 de abril de 2012

Stellate Cells, Hepatocytes, and Endothelial Cells Imprint the Kupffer Cell Identity on Monocytes Colonizing the Liver Macrophage Niche

scientific article published on 24 September 2019

Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks

artículo científico publicado en 2014

The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice

artículo científico publicado en 2002

The checkpoint for agonist selection precedes conventional selection in human thymus.

artículo científico

The function of Fcγ receptors in dendritic cells and macrophages

artículo científico

The unfolded-protein-response sensor IRE-1α regulates the function of CD8α+ dendritic cells.

artículo científico

Toward a gold standard for promoter prediction evaluation

artículo científico publicado en 2009

Trajectory-based differential expression analysis for single-cell sequencing data

artículo científico publicado en 2020

Translation initiation site prediction on a genomic scale: beauty in simplicity

artículo científico publicado en 2007

Validating module network learning algorithms using simulated data

artículo científico publicado en 2007

Vascular transcription factors guide plant epidermal responses to limiting phosphate conditions

artículo científico publicado en 2020

Lista de obras de Yvan Saeys

A Murine Intestinal Intraepithelial NKp46-Negative Innate Lymphoid Cell Population Characterized by Group 1 Properties.

A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes.

A cell atlas of human thymic development defines T cell repertoire formation

A comparison of single-cell trajectory inference methods

A greedy, graph-based algorithm for the alignment of multiple homologous gene lists

A review of estimation of distribution algorithms in bioinformatics

An integrated network of Arabidopsis growth regulators and its use for gene prioritization

An interactive ImageJ plugin for semi-automated image denoising in electron microscopy

An overview of state-of-the-art image restoration in electron microscopy

Bone marrow-derived monocytes give rise to self-renewing and fully differentiated Kupffer cells

Building genomic profiles for uncovering segmental homology in the twilight zone

CATCh, an ensemble classifier for chimera detection in 16S rRNA sequencing studies

Challenges in translational machine learning

Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing

Classification of Human White Blood Cells Using Machine Learning for Stain-Free Imaging Flow Cytometry

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Computational analysis of multimorbidity between asthma, eczema and rhinitis

Discriminative and informative features for biomolecular text mining with ensemble feature selection

Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction

Fibrotic enzymes modulate wound-induced skin tumorigenesis

FloReMi: Flow density survival regression using minimal feature redundancy

FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA.

GATA1-Deficient Dendritic Cells Display Impaired CCL21-Dependent Migration toward Lymph Nodes Due to Reduced Levels of Polysialic Acid.

Generic eukaryotic core promoter prediction using structural features of DNA.

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

GenomeView: a next-generation genome browser

HIGH-PRECISION BIO-MOLECULAR EVENT EXTRACTION FROM TEXT USING PARALLEL BINARY CLASSIFIERS

In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists

Large-scale structural analysis of the core promoter in mammalian and plant genomes

Macrophages are metabolically heterogeneous within the tumor microenvironment

Mechanical strain determines the site-specific localization of inflammation and tissue damage in arthritis

Mechanisms of the Development of Allergy (MeDALL): Introducing novel concepts in allergy phenotypes

NIMEFI: gene regulatory network inference using multiple ensemble feature importance algorithms

Netter: re-ranking gene network inference predictions using structural network properties

NicheNet: modeling intercellular communication by linking ligands to target genes

Operational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures

PeacoQC: Peak-based selection of high quality cytometry data

Phenotyping asthma, rhinitis and eczema in MeDALL population-based birth cohorts: an allergic comorbidity cluster

ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles

Radiation-induced alternative transcription and splicing events and their applicability to practical biodosimetry

Robust biomarker identification for cancer diagnosis with ensemble feature selection methods

Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors ⬇️

SpliceMachine: predicting splice sites from high-dimensional local context representations

Stabilization of human whole blood samples for multi-center and retrospective immunophenotyping studies

Statistical interpretation of machine learning-based feature importance scores for biomarker discovery ⬇️

Stellate Cells, Hepatocytes, and Endothelial Cells Imprint the Kupffer Cell Identity on Monocytes Colonizing the Liver Macrophage Niche

Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks

The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice

The checkpoint for agonist selection precedes conventional selection in human thymus.

The function of Fcγ receptors in dendritic cells and macrophages

The unfolded-protein-response sensor IRE-1α regulates the function of CD8α+ dendritic cells.

Toward a gold standard for promoter prediction evaluation

Trajectory-based differential expression analysis for single-cell sequencing data

Translation initiation site prediction on a genomic scale: beauty in simplicity

Validating module network learning algorithms using simulated data

Vascular transcription factors guide plant epidermal responses to limiting phosphate conditions