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Lista de obras de David J. Sherman

A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum

artículo científico publicado en 2014

A community standard format for the representation of protein affinity reagents

artículo científico publicado en 2009

A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica

artículo científico publicado en 2012

A systematic nomenclature of chromosomal elements for hemiascomycete yeasts

artículo científico publicado en 2005

Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions

artículo científico publicado en 2007

Common interchange standards for proteomics data: Public availability of tools and schema

artículo científico publicado en 2004

Comparative genomics of protoploid Saccharomycetaceae

artículo científico publicado en 2009

Diversity and variability of NOD-like receptors in fungi

artículo científico publicado en 2014

Draft Genome Sequence of Rhodosporidium toruloides CECT1137, an Oleaginous Yeast of Biotechnological Interest

artículo científico publicado en 2014

Extrapolation of metabolic pathways as an aid to modelling completely sequenced nonSaccharomyces yeasts

artículo científico publicado en 2007

Family relationships: should consensus reign?--consensus clustering for protein families

artículo científico publicado en 2007

Fusion and fission of genes define a metric between fungal genomes

artículo científico publicado en 2008

Genome Sequence of Lactobacillus saerimneri 30a (Formerly Lactobacillus sp. Strain 30a), a Reference Lactic Acid Bacterium Strain Producing Biogenic Amines

artículo científico publicado en 2013

Genome Sequence of the Yeast Clavispora lusitaniae Type Strain CBS 6936.

artículo científico publicado en 2017

Genome evolution in yeasts

artículo científico publicado en 2004

Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes

artículo científico publicado en 2008

How to decide which are the most pertinent overly-represented features during gene set enrichment analysis

artículo científico publicado en 2007

Implementing biological hybrid systems: Allowing composition and avoiding stiffness

article

IntAct: an open source molecular interaction database

artículo científico publicado en 2004

Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains

artículo científico publicado en 2010

Knowledge-based generalization of metabolic models

artículo científico

Knowledge-based generalization of metabolic networks: a practical study

artículo científico publicado en 2014

Many interspecific chromosomal introgressions are highly prevalent in Holarctic Saccharomyces uvarum strains found in human-related fermentations.

artículo científico

Mimoza: web-based semantic zooming and navigation in metabolic networks

artículo científico publicado en 2015

Minimum information about a protein affinity reagent (MIAPAR)

artículo científico publicado en 2010

Minimum information requirements: Neither bandits in the Attic nor bats in the belfry

Mining the semantics of genome super-blocks to infer ancestral architectures

artículo científico

Modeling acclimatization by hybrid systems: Condition changes alter biological system behavior models

scholarly article by Rodrigo Assar et al published July 2014 in BioSystems

New strategy for the representation and the integration of biomolecular knowledge at a cellular scale

artículo científico

Novel Transporters from Hemiascomycete Yeasts

article published in 2003

Optimization of equational programs using partial evaluation

article

Pantograph: A template-based method for genome-scale metabolic model reconstruction

artículo científico

Phylogenomic Analysis of Oenococcus oeni Reveals Specific Domestication of Strains to Cider and Wines

artículo científico publicado en 2015

Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization

artículo científico publicado en 2012

ProViz: protein interaction visualization and exploration

artículo científico publicado en 2004

ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome

article

QTL dissection of Lag phase in wine fermentation reveals a new translocation responsible for Saccharomyces cerevisiae adaptation to sulfite

artículo científico publicado en 2014

Reconciling Competing Models: A Case Study of Wine Fermentation Kinetics

article by Rodrigo Assar et al published 2012 in Lecture Notes in Computer Science

Reusing and composing models of cell fate regulation of human bone precursor cells

Squeezing intermediate construction in equational programs

Swarming along the evolutionary branches sheds light on genome rearrangement scenarios

The Génolevures database

artículo científico publicado en 2011

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

artículo científico publicado en 2004

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest

artículo científico publicado en 2014

Unusual composition of a yeast chromosome arm is associated with its delayed replication

artículo científico publicado en 2009