Lista de obras - Takanori Kigawa - Dominio Público Uruguay

A B-box 2 surface patch important for TRIM5alpha self-association, capsid binding avidity, and retrovirus restriction

artículo científico publicado en 2009

A Multiphysics Model of In Vitro Transcription Coupling Enzymatic Reaction and Precipitation Formation ⬇️

artículo científico publicado el 18 de enero de 2012

A highly efficient cell-free protein synthesis system from Escherichia coli

artículo científico publicado en 1996

A new modeling method in feature construction for the HSQC spectra screening problem.

artículo científico publicado en 2008

A new protein engineering approach combining chemistry and biology, part I; site-specific incorporation of 4-iodo-L-phenylalanine in vitro by using misacylated suppressor tRNAPhe

artículo científico publicado en 2006

A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C

artículo científico publicado en 2016

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

artículo científico publicado en 2004

A practical method for cell-free protein synthesis to avoid stable isotope scrambling and dilution ⬇️

artículo científico publicado el 20 de enero de 2011

A pre-metazoan origin of the CRK gene family and co-opted signaling network

artículo científico publicado en 2016

Aberrant assembly of RNA recognition motif 1 links to pathogenic conversion of TAR DNA-binding protein of 43 kDa (TDP-43)

artículo científico publicado en 2013

Accurate and molecular-size-tolerant NMR quantitation of diverse components in solution

artículo científico publicado en 2016

Active intermediates of polyhydroxyalkanoate synthase from Aeromonas caviae in polymerization reaction

artículo científico publicado en 2012

Advances in stable isotope assisted labeling strategies with information science.

artículo científico publicado en 2017

Amino-acid selective isotope labeling enables simultaneous overlapping signal decomposition and information extraction from NMR spectra

scientific article published on 30 January 2020

An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure

artículo científico publicado en 2006

An automated system designed for large scale NMR data deposition and annotation: application to over 600 assigned chemical shift data entries to the BioMagResBank from the Riken Structural Genomics/Proteomics Initiative internal database

artículo científico publicado en 2012

An economical method for producing stable-isotope labeled proteins by the E. coli cell-free system ⬇️

artículo científico publicado el 4 de noviembre de 2010

An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system

artículo científico publicado en 2002

Analysis of protein functions through a bacterial cell-free protein expression system

artículo científico publicado en 2010

Angucycline antibiotic waldiomycin recognizes common structural motif conserved in bacterial histidine kinases.

artículo científico publicado en 2016

Automated system for high-throughput protein production using the dialysis cell-free method

artículo científico publicado en 2009

Cell-free protein preparation through prokaryotic transcription-translation methods

artículo científico publicado en 2010

Cell-free protein production system with the E. coli crude extract for determination of protein folds

artículo científico publicado en 2010

Cell-free synthesis and amino acid-selective stable isotope labeling of proteins for NMR analysis

artículo científico publicado en 1995

Cell-free synthesis system suitable for disulfide-containing proteins

artículo científico publicado en 2013

Co-expression of two polyhydroxyalkanoate synthase subunits from Synechocystis sp. PCC 6803 by cell-free synthesis and their specific activity for polymerization of 3-hydroxybutyryl-coenzyme A.

artículo científico publicado en 2015

Cold shock proteins improve E. coli cell-free synthesis in terms of soluble yields of aggregation-prone proteins

scientific article published on 12 March 2020

Comparison of residual alpha- and beta-structures between two intrinsically disordered proteins by using NMR.

artículo científico publicado en 2014

Contribution of E3-ubiquitin ligase activity to HIV-1 restriction by TRIM5alpha(rh): structure of the RING domain of TRIM5alpha

artículo científico publicado en 2011

Crystal structure of Sulfolobus tokodaii Sua5 complexed with L-threonine and AMPPNP

artículo científico publicado en 2011

Crystal structure of the RUN domain of the RAP2-interacting protein x

scientific journal article

DNA-binding domains of plant-specific transcription factors: structure, function, and evolution ⬇️

artículo científico publicado el 3 de octubre de 2012

Direct introduction of neomycin phosphotransferase II protein into apple leaves to confer kanamycin resistance

artículo científico publicado en 2016

Dual amino acid-selective and site-directed stable-isotope labeling of the human c-Ha-Ras protein by cell-free synthesis

artículo científico publicado el 1 de abril de 1998

Effect of Glu12-His89 Interaction on Dynamic Structures in HIV-1 p17 Matrix Protein Elucidated by NMR

artículo científico publicado en 2016

Effects of Escherichia coli ribosomal protein S12 mutations on cell-free protein synthesis.

artículo científico publicado en 2004

Flexible and rigid structures in HIV-1 p17 matrix protein monitored by relaxation and amide proton exchange with NMR.

artículo científico publicado en 2013

Impact of cellular health conditions on the protein folding state in mammalian cells.

artículo científico publicado en 2017

Improving cell-free protein synthesis for stable-isotope labeling

artículo científico publicado en 2007

Intracellular Delivery of Proteins via Fusion Peptides in Intact Plants

artículo científico publicado en 2016

KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies.

artículo científico publicado en 2007

Long-range effects of tag sequence on marginally stabilized structure in HIV-1 p24 capsid protein monitored using NMR.

artículo científico publicado en 2014

Molecular actions of two synthetic brassinosteroids, iso-carbaBL and 6-deoxoBL, which cause altered physiological activities between Arabidopsis and rice

artículo científico publicado en 2017

Molecular level evaluation on HEMA interaction with a collagen model.

artículo científico publicado en 2014

Monomer-collagen interactions studied by saturation transfer difference NMR

artículo científico publicado en 2013

Multiple inhibitory factor removal from an Escherichia coli cell extract improves cell-free protein synthesis.

artículo científico publicado en 2009

NMR and X-ray structures of the putative sterol carrier protein 2 from Thermus thermophilus HB8 show conformational changes

artículo científico publicado en 2010

NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana

artículo científico publicado en 2004

NMR assignment of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana

artículo científico publicado en 2004

NMR solution structure of human vaccinia-related kinase 1 (VRK1) reveals the C-terminal tail essential for its structural stability and autocatalytic activity

artículo científico publicado en 2011

NMR solution structures of actin depolymerizing factor homology domains

artículo científico publicado en 2009

Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3

artículo científico publicado en 2014

Novel dimerization mode of the human Bcl-2 family protein Bak, a mitochondrial apoptosis regulator

artículo científico publicado en 2009

Peptide-Based Polyion Complex Vesicles That Deliver Enzymes into Intact Plants To Provide Antibiotic Resistance without Genetic Modification

artículo científico publicado en 2020

Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity

artículo científico publicado en 2011

RING domain mutations uncouple TRIM5α restriction of HIV-1 from inhibition of reverse transcription and acceleration of uncoating

artículo científico publicado en 2011

Rapid biochemical synthesis of 11C-labeled single chain variable fragment antibody for immuno-PET by cell-free protein synthesis ⬇️

artículo científico publicado el 25 de septiembre de 2012

Regioselective carbon-carbon bond formation in proteins with palladium catalysis; new protein chemistry by organometallic chemistry

artículo científico publicado en 2006

Role of 2-hydroxyethyl methacrylate in the interaction of dental monomers with collagen studied by saturation transfer difference NMR.

artículo científico publicado en 2014

Simplification of the genetic code: restricted diversity of genetically encoded amino acids

artículo científico publicado en 2012

Simultaneous introduction of multiple biomacromolecules into plant cells using a cell-penetrating peptide nanocarrier

artículo científico publicado en 2020

Site-Specific Functionalization of Proteins by Organopalladium Reactions

scholarly article by Koichiro Kodama published in January 2007

Site-specific incorporation of 4-iodo-L-phenylalanine through opal suppression

artículo científico publicado en 2010

Solution structure and siRNA-mediated knockdown analysis of the mitochondrial disease-related protein C12orf65

artículo científico publicado en 2012

Solution structure of a BolA-like protein from Mus musculus

artículo científico publicado en 2004

Solution structure of an Arabidopsis WRKY DNA binding domain

artículo científico publicado en 2005

Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form

artículo científico publicado en 2007

Solution structure of histone chaperone ANP32B: interaction with core histones H3-H4 through its acidic concave domain

artículo científico publicado en 2010

Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1

artículo científico publicado en 2004

Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein

artículo científico publicado en 2010

Solution structure of the GUCT domain from human RNA helicase II/Gu beta reveals the RRM fold, but implausible RNA interactions

artículo científico publicado en 2009

Solution structure of the PWWP domain of the hepatoma-derived growth factor family

scientific journal article

Solution structure of the RNA binding domain in the human muscleblind-like protein 2

artículo científico publicado en 2009

Solution structure of the RWD domain of the mouse GCN2 protein

artículo científico publicado en 2004

Solution structure of the SEA domain from the murine homologue of ovarian cancer antigen CA125 (MUC16)

artículo científico publicado en 2004

Solution structure of the SWIRM domain of human histone demethylase LSD1

artículo científico publicado en 2006

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

artículo científico publicado en 2005

Solution structure of the antifreeze-like domain of human sialic acid synthase

artículo científico publicado en 2006

Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality

artículo científico publicado en 2010

Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily

artículo científico publicado en 2009

Solution structure of the epsin N-terminal homology (ENTH) domain of human epsin

artículo científico publicado en 2002

Solution structure of the extraterminal domain of the bromodomain-containing protein BRD4.

artículo científico publicado en 2008

Solution structure of the first RNA recognition motif domain of human spliceosomal protein SF3b49 and its mode of interaction with a SF3b145 fragment

artículo científico publicado en 2017

Solution structure of the major DNA-binding domain of Arabidopsis thaliana ethylene-insensitive3-like3.

artículo científico publicado en 2005

Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold

artículo científico publicado en 2005

Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana

artículo científico publicado en 2004

Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode

artículo científico publicado en 2008

Solution structure of the splicing factor motif of the human Prp18 protein

scholarly article by Fahu He published in December 2011

Solution structure of the zinc finger HIT domain in protein FON

artículo científico publicado en 2007

Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT.

artículo científico publicado en 2015

Solution structures of the double-stranded RNA-binding domains from RNA helicase A

artículo científico publicado en 2012

Stable isotope labeling strategy based on coding theory.

artículo científico publicado en 2015

Structural Basis for Sequence-specific DNA Recognition by an Arabidopsis WRKY Transcription Factor

artículo científico publicado en 2012

Structural and functional characterization of the NHR1 domain of the Drosophila neuralized E3 ligase in the notch signaling pathway

artículo científico publicado en 2009

Structural and functional differences of SWIRM domain subtypes

artículo científico publicado en 2007

Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms

artículo científico publicado en 2012

Structural basis for the dual RNA-recognition modes of human Tra2- RRM

artículo científico publicado en 2011

Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2

artículo científico publicado en 2010

Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3

artículo científico publicado en 2009

Structural insight into the interaction of ADP-ribose with the PARP WWE domains

artículo científico publicado en 2012

Structural insight into the zinc finger CW domain as a histone modification reader

artículo científico publicado en 2010

Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains

artículo científico publicado en 2008

Structures of the first and second double-stranded RNA-binding domains of human TAR RNA-binding protein

artículo científico publicado en 2011

The C-terminal BAG domain of BAG5 induces conformational changes of the Hsp70 nucleotide-binding domain for ADP-ATP exchange

artículo científico publicado en 2010

The CAP-Gly domain of CYLD associates with the proline-rich sequence in NEMO/IKKgamma

artículo científico publicado en 2004

The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein

artículo científico publicado en 2010

The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition

artículo científico publicado en 2008

The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain

scientific journal article

ZF21 Protein, a Regulator of the Disassembly of Focal Adhesions and Cancer Metastasis, Contains a Novel Noncanonical Pleckstrin Homology Domain

artículo científico publicado en 2011

Lista de obras de Takanori Kigawa

A B-box 2 surface patch important for TRIM5alpha self-association, capsid binding avidity, and retrovirus restriction

A Multiphysics Model of In Vitro Transcription Coupling Enzymatic Reaction and Precipitation Formation ⬇️

A highly efficient cell-free protein synthesis system from Escherichia coli

A new modeling method in feature construction for the HSQC spectra screening problem.

A new protein engineering approach combining chemistry and biology, part I; site-specific incorporation of 4-iodo-L-phenylalanine in vitro by using misacylated suppressor tRNAPhe

A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

A practical method for cell-free protein synthesis to avoid stable isotope scrambling and dilution ⬇️

A pre-metazoan origin of the CRK gene family and co-opted signaling network

Aberrant assembly of RNA recognition motif 1 links to pathogenic conversion of TAR DNA-binding protein of 43 kDa (TDP-43)

Accurate and molecular-size-tolerant NMR quantitation of diverse components in solution

Active intermediates of polyhydroxyalkanoate synthase from Aeromonas caviae in polymerization reaction

Advances in stable isotope assisted labeling strategies with information science.

Amino-acid selective isotope labeling enables simultaneous overlapping signal decomposition and information extraction from NMR spectra

An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure

An automated system designed for large scale NMR data deposition and annotation: application to over 600 assigned chemical shift data entries to the BioMagResBank from the Riken Structural Genomics/Proteomics Initiative internal database

An economical method for producing stable-isotope labeled proteins by the E. coli cell-free system ⬇️

An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system

Analysis of protein functions through a bacterial cell-free protein expression system

Angucycline antibiotic waldiomycin recognizes common structural motif conserved in bacterial histidine kinases.

Automated system for high-throughput protein production using the dialysis cell-free method

Cell-free protein preparation through prokaryotic transcription-translation methods

Cell-free protein production system with the E. coli crude extract for determination of protein folds

Cell-free synthesis and amino acid-selective stable isotope labeling of proteins for NMR analysis

Cell-free synthesis system suitable for disulfide-containing proteins

Co-expression of two polyhydroxyalkanoate synthase subunits from Synechocystis sp. PCC 6803 by cell-free synthesis and their specific activity for polymerization of 3-hydroxybutyryl-coenzyme A.

Cold shock proteins improve E. coli cell-free synthesis in terms of soluble yields of aggregation-prone proteins

Comparison of residual alpha- and beta-structures between two intrinsically disordered proteins by using NMR.

Contribution of E3-ubiquitin ligase activity to HIV-1 restriction by TRIM5alpha(rh): structure of the RING domain of TRIM5alpha

Crystal structure of Sulfolobus tokodaii Sua5 complexed with L-threonine and AMPPNP

Crystal structure of the RUN domain of the RAP2-interacting protein x

DNA-binding domains of plant-specific transcription factors: structure, function, and evolution ⬇️

Direct introduction of neomycin phosphotransferase II protein into apple leaves to confer kanamycin resistance

Dual amino acid-selective and site-directed stable-isotope labeling of the human c-Ha-Ras protein by cell-free synthesis

Effect of Glu12-His89 Interaction on Dynamic Structures in HIV-1 p17 Matrix Protein Elucidated by NMR

Effects of Escherichia coli ribosomal protein S12 mutations on cell-free protein synthesis.

Flexible and rigid structures in HIV-1 p17 matrix protein monitored by relaxation and amide proton exchange with NMR.

Impact of cellular health conditions on the protein folding state in mammalian cells.

Improving cell-free protein synthesis for stable-isotope labeling

Intracellular Delivery of Proteins via Fusion Peptides in Intact Plants

KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies.

Long-range effects of tag sequence on marginally stabilized structure in HIV-1 p24 capsid protein monitored using NMR.

Molecular actions of two synthetic brassinosteroids, iso-carbaBL and 6-deoxoBL, which cause altered physiological activities between Arabidopsis and rice

Molecular level evaluation on HEMA interaction with a collagen model.

Monomer-collagen interactions studied by saturation transfer difference NMR

Multiple inhibitory factor removal from an Escherichia coli cell extract improves cell-free protein synthesis.

NMR and X-ray structures of the putative sterol carrier protein 2 from Thermus thermophilus HB8 show conformational changes

NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana

NMR assignment of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana

NMR solution structure of human vaccinia-related kinase 1 (VRK1) reveals the C-terminal tail essential for its structural stability and autocatalytic activity

NMR solution structures of actin depolymerizing factor homology domains

Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3

Novel dimerization mode of the human Bcl-2 family protein Bak, a mitochondrial apoptosis regulator

Peptide-Based Polyion Complex Vesicles That Deliver Enzymes into Intact Plants To Provide Antibiotic Resistance without Genetic Modification

Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity

RING domain mutations uncouple TRIM5α restriction of HIV-1 from inhibition of reverse transcription and acceleration of uncoating

Rapid biochemical synthesis of 11C-labeled single chain variable fragment antibody for immuno-PET by cell-free protein synthesis ⬇️

Regioselective carbon-carbon bond formation in proteins with palladium catalysis; new protein chemistry by organometallic chemistry

Role of 2-hydroxyethyl methacrylate in the interaction of dental monomers with collagen studied by saturation transfer difference NMR.

Simplification of the genetic code: restricted diversity of genetically encoded amino acids

Simultaneous introduction of multiple biomacromolecules into plant cells using a cell-penetrating peptide nanocarrier

Site-Specific Functionalization of Proteins by Organopalladium Reactions

Site-specific incorporation of 4-iodo-L-phenylalanine through opal suppression

Solution structure and siRNA-mediated knockdown analysis of the mitochondrial disease-related protein C12orf65

Solution structure of a BolA-like protein from Mus musculus

Solution structure of an Arabidopsis WRKY DNA binding domain

Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form

Solution structure of histone chaperone ANP32B: interaction with core histones H3-H4 through its acidic concave domain

Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1

Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein

Solution structure of the GUCT domain from human RNA helicase II/Gu beta reveals the RRM fold, but implausible RNA interactions

Solution structure of the PWWP domain of the hepatoma-derived growth factor family

Solution structure of the RNA binding domain in the human muscleblind-like protein 2

Solution structure of the RWD domain of the mouse GCN2 protein

Solution structure of the SEA domain from the murine homologue of ovarian cancer antigen CA125 (MUC16)

Solution structure of the SWIRM domain of human histone demethylase LSD1

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

Solution structure of the antifreeze-like domain of human sialic acid synthase

Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality