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Lista de obras de Anant Madabhushi

A Deep Convolutional Neural Network for segmenting and classifying epithelial and stromal regions in histopathological images.

artículo científico publicado en 2016

A Domain Constrained Deformable (DoCD) Model for Co-registration of Pre- and Post-Radiated Prostate MRI.

artículo científico publicado en 2014

A Learning Based Fiducial-driven Registration Scheme for Evaluating Laser Ablation Changes in Neurological Disorders.

artículo científico publicado en 2014

A Radio-genomics Approach for Identifying High Risk Estrogen Receptor-positive Breast Cancers on DCE-MRI: Preliminary Results in Predicting OncotypeDX Risk Scores

artículo científico publicado en 2016

A Review of Deep Learning in Medical Imaging: Imaging Traits, Technology Trends, Case Studies With Progress Highlights, and Future Promises

artículo científico publicado en 2021

A boosted Bayesian multiresolution classifier for prostate cancer detection from digitized needle biopsies.

artículo científico publicado en 2010

A deep learning architecture for image representation, visual interpretability and automated basal-cell carcinoma cancer detection

artículo científico publicado en 2013

A deep learning based strategy for identifying and associating mitotic activity with gene expression derived risk categories in estrogen receptor positive breast cancers.

artículo científico publicado en 2017

A deep-learning classifier identifies patients with clinical heart failure using whole-slide images of H&E tissue

artículo científico publicado en 2018

A high-throughput active contour scheme for segmentation of histopathological imagery.

artículo científico publicado en 2011

A magnetic resonance spectroscopy driven initialization scheme for active shape model based prostate segmentation.

artículo científico publicado en 2010

A quantitative histomorphometric classifier (QuHbIC) identifies aggressive versus indolent p16-positive oropharyngeal squamous cell carcinoma.

artículo científico publicado en 2014

A resolution adaptive deep hierarchical (RADHicaL) learning scheme applied to nuclear segmentation of digital pathology images.

artículo científico publicado en 2016

Accurate and reproducible invasive breast cancer detection in whole-slide images: A Deep Learning approach for quantifying tumor extent

artículo científico publicado en 2017

Accurate prostate volume estimation using multifeature active shape models on T2-weighted MRI.

artículo científico publicado en 2011

Adaptive Dimensionality Reduction with Semi-Supervision (AdDReSS): Classifying Multi-Attribute Biomedical Data

artículo científico publicado en 2016

Adaptive energy selective active contour with shape priors for nuclear segmentation and gleason grading of prostate cancer

artículo científico publicado en 2011

Aggregated distance metric learning (ADM) for image classification in presence of limited training data

artículo científico publicado en 2011

An Image Analysis Resource for Cancer Research: PIIP-Pathology Image Informatics Platform for Visualization, Analysis, and Management

artículo científico publicado en 2017

An active learning based classification strategy for the minority class problem: application to histopathology annotation.

artículo científico publicado en 2011

An integrated region-, boundary-, shape-based active contour for multiple object overlap resolution in histological imagery

artículo científico publicado en 2012

An integrated segmentation and shape-based classification scheme for distinguishing adenocarcinomas from granulomas on lung CT.

artículo científico publicado en 2017

An integrated texton and bag of words classifier for identifying anaplastic medulloblastomas

artículo científico publicado en 2011

Anisotropic smoothing regularization (AnSR) in Thirion's Demons registration evaluates brain MRI tissue changes post-laser ablation

artículo científico publicado en 2013

Assessment of algorithms for mitosis detection in breast cancer histopathology images

artículo científico publicado en 2014

Association of computerized texture features on MRI with early treatment response following laser ablation for neuropathic cancer pain: preliminary findings.

artículo científico publicado en 2015

AutoStitcher: An Automated Program for Efficient and Robust Reconstruction of Digitized Whole Histological Sections from Tissue Fragments.

artículo científico publicado en 2016

Automated Tubule Nuclei Quantification and Correlation with Oncotype DX risk categories in ER+ Breast Cancer Whole Slide Images

artículo científico publicado en 2016

Automated computer-derived prostate volumes from MR imaging data: comparison with radiologist-derived MR imaging and pathologic specimen volumes

artículo científico publicado en 2012

Brief-exposure to preoperative bevacizumab reveals a TGF-β signature predictive of response in HER2-negative breast cancers

artículo científico publicado en 2015

CADOnc(©): An Integrated Toolkit For Evaluating Radiation Therapy Related Changes In The Prostate Using Multiparametric MRI.

artículo científico publicado en 2011

Cascaded Multi-view Canonical Correlation (CaMCCo) for Early Diagnosis of Alzheimer's Disease via Fusion of Clinical, Imaging and Omic Features

artículo científico publicado en 2017

Cascaded discrimination of normal, abnormal, and confounder classes in histopathology: Gleason grading of prostate cancer ⬇️

artículo científico publicado el 30 de octubre de 2012

Cell orientation entropy (COrE): predicting biochemical recurrence from prostate cancer tissue microarrays

artículo científico publicado en 2013

Central gland and peripheral zone prostate tumors have significantly different quantitative imaging signatures on 3 tesla endorectal, in vivo T2‐weighted MR imagery ⬇️

artículo científico publicado el 15 de febrero de 2012

Changes in CT Radiomic Features Associated with Lymphocyte Distribution Predict Overall Survival and Response to Immunotherapy in Non-Small Cell Lung Cancer

scientific article published on 12 November 2019

Class-specific weighting for Markov random field estimation: Application to medical image segmentation ⬇️

artículo científico publicado el 16 de julio de 2012

Co-Registration of ex vivo Surgical Histopathology and in vivo T2 weighted MRI of the Prostate via multi-scale spectral embedding representation.

artículo científico publicado en 2017

Co-occurrence of Local Anisotropic Gradient Orientations (CoLlAGe): A new radiomics descriptor.

artículo científico publicado en 2016

Co-occurrence of local anisotropic gradient orientations (CoLIAGe): distinguishing tumor confounders and molecular subtypes on MRI

scientific article published on 01 January 2014

Co-occurring gland angularity in localized subgraphs: predicting biochemical recurrence in intermediate-risk prostate cancer patients

artículo científico publicado en 2014

Co-registration of pre-operative CT with ex vivo surgically excised ground glass nodules to define spatial extent of invasive adenocarcinoma on in vivo imaging: a proof-of-concept study

artículo científico publicado en 2017

Combination of Peri-Tumoral and Intra-Tumoral Radiomic Features on Bi-Parametric MRI Accurately Stratifies Prostate Cancer Risk: A Multi-Site Study

artículo científico publicado en 2020

Combination of computer extracted shape and texture features enables discrimination of granulomas from adenocarcinoma on chest computed tomography

scientific article published on 18 April 2018

Combining low-, high-level and empirical domain knowledge for automated segmentation of ultrasonic breast lesions.

artículo científico publicado en 2003

Comparing MR image intensity standardization against tissue characterizability of magnetization transfer ratio imaging

artículo científico publicado en 2006

Computational imaging reveals shape differences between normal and malignant prostates on MRI.

artículo científico publicado en 2017

Computer Extracted Features from Initial H&E Tissue Biopsies Predict Disease Progression for Prostate Cancer Patients on Active Surveillance

scientific article published on 21 September 2020

Computer-Extracted Texture Features to Distinguish Cerebral Radionecrosis from Recurrent Brain Tumors on Multiparametric MRI: A Feasibility Study

artículo científico publicado en 2016

Computer-aided prognosis: predicting patient and disease outcome via quantitative fusion of multi-scale, multi-modal data

artículo científico publicado en 2011

Computer-extracted Features Can Distinguish Noncancerous Confounding Disease from Prostatic Adenocarcinoma at Multiparametric MR Imaging.

artículo científico publicado en 2015

Computerized image analysis for identifying triple-negative breast cancers and differentiating them from other molecular subtypes of breast cancer on dynamic contrast-enhanced MR images: a feasibility study

artículo científico publicado en 2014

Computerized image-based detection and grading of lymphocytic infiltration in HER2+ breast cancer histopathology

artículo científico publicado en 2009

Concurrent segmentation of the prostate on MRI and CT via linked statistical shape models for radiotherapy planning.

artículo científico publicado en 2012

Connecting Markov random fields and active contour models: application to gland segmentation and classification.

artículo científico publicado en 2017

Consensus embedding: theory, algorithms and application to segmentation and classification of biomedical data ⬇️

artículo científico publicado el 8 de febrero de 2012

Convolutional neural network initialized active contour model with adaptive ellipse fitting for nuclear segmentation on breast histopathological images

artículo científico publicado en 2019

Deep computational image analysis of immune cell niches reveals treatment-specific outcome associations in lung cancer

artículo científico publicado en 2023

Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases

artículo científico publicado en 2016

Deep learning reveals lung shape differences on baseline chest CT between mild and severe COVID-19: A multi-site retrospective study

artículo científico publicado en 2024

Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models

artículo científico publicado en 2011

Determining histology-MRI slice correspondences for defining MRI-based disease signatures of prostate cancer

artículo científico publicado en 2011

Digital imaging in pathology: whole-slide imaging and beyond.

artículo científico publicado en 2012

Dimensionality reduction-based fusion approaches for imaging and non-imaging biomedical data: concepts, workflow, and use-cases

artículo científico publicado en 2017

Discriminative Scale Learning (DiScrn): Applications to Prostate Cancer Detection from MRI and Needle Biopsies.

artículo científico publicado en 2017

Disorder in Pixel-Level Edge Directions on T1WI Is Associated with the Degree of Radiation Necrosis in Primary and Metastatic Brain Tumors: Preliminary Findings

scientific article published on 07 February 2019

Distinguishing lesions from posterior acoustic shadowing in breast ultrasound via non-linear dimensionality reduction.

artículo científico publicado en 2006

Editorial Comment

artículo científico publicado en 2016

Editorial: TBME Letters special section on multiscale biomedical signal and image modeling and analysis

artículo científico publicado en 2011

Emerging Themes in Image Informatics and Molecular Analysis for Digital Pathology

artículo científico publicado en 2016

Enhanced Multi-Protocol Analysis via Intelligent Supervised Embedding (EMPrAvISE): Detecting Prostate Cancer on Multi-Parametric MRI.

artículo científico publicado en 2011

Erratum to: Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI.

artículo científico publicado en 2017

Erratum to: Radiomic features from the peritumoral brain parenchyma on treatment-naïve multi-parametric MR imaging predict long versus short-term survival in glioblastoma multiforme: Preliminary findings

artículo científico publicado en 2017

Evaluating feature selection strategies for high dimensional, small sample size datasets.

artículo científico publicado en 2011

Evaluating stability of histomorphometric features across scanner and staining variations: prostate cancer diagnosis from whole slide images

artículo científico publicado en 2016

Evaluation of prostate segmentation algorithms for MRI: the PROMISE12 challenge

artículo científico publicado en 2013

Expectation-maximization-driven geodesic active contour with overlap resolution (EMaGACOR): application to lymphocyte segmentation on breast cancer histopathology

artículo científico publicado en 2010

Explicit shape descriptors: novel morphologic features for histopathology classification.

artículo científico publicado en 2013

Feature Importance in Nonlinear Embeddings (FINE): Applications in Digital Pathology

artículo científico publicado en 2015

Framework for 3D histologic reconstruction and fusion with in vivo MRI: Preliminary results of characterizing pulmonary inflammation in a mouse model.

artículo científico publicado en 2015

Fully Automated Prostate Magnetic Resonance Imaging and Transrectal Ultrasound Fusion via a Probabilistic Registration Metric.

artículo científico publicado en 2013

Graph embedding to improve supervised classification and novel class detection: application to prostate cancer

scientific article published on 01 January 2005

Harnessing non-destructive 3D pathology

scientific article published in 2021

Hierarchical normalized cuts: unsupervised segmentation of vascular biomarkers from ovarian cancer tissue microarrays

artículo científico publicado en 2009

High-Throughput Biomarker Segmentation on Ovarian Cancer Tissue Microarrays via Hierarchical Normalized Cuts ⬇️

artículo científico publicado el 13 de diciembre de 2011

HistoStitcher(©): an interactive program for accurate and rapid reconstruction of digitized whole histological sections from tissue fragments.

artículo científico publicado en 2011

Histopathological image analysis: a review

artículo científico publicado en 2009

Identifying MRI markers associated with early response following laser ablation for neurological disorders: preliminary findings

artículo científico publicado en 2014

Identifying MRI markers to evaluate early treatment related changes post laser ablation for cancer pain management.

artículo científico publicado en 2014

Identifying Quantitative In Vivo Multi-Parametric MRI Features For Treatment Related Changes after Laser Interstitial Thermal Therapy of Prostate Cancer.

artículo científico publicado en 2014

Identifying in vivo DCE MRI markers associated with microvessel architecture and gleason grades of prostate cancer

artículo científico publicado en 2015

Image analysis and machine learning in digital pathology: Challenges and opportunities

artículo científico

Image filtering via generalized scale.

artículo científico publicado en 2007

Improving supervised classification accuracy using non-rigid multimodal image registration: detecting prostate cancer

Integrated diagnostics: a conceptual framework with examples.

artículo científico publicado en 2010

Integrating Structural and Functional Imaging for Computer Assisted Detection of Prostate Cancer on Multi-Protocol In Vivo 3 Tesla MRI

artículo científico publicado en 2009

Integration of architectural and cytologic driven image algorithms for prostate adenocarcinoma identification.

artículo científico publicado en 2012

Interplay between bias field correction, intensity standardization, and noise filtering for T2-weighted MRI.

artículo científico publicado en 2011

Interplay between intensity standardization and inhomogeneity correction in MR image processing

artículo científico publicado en 2005

Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI.

artículo científico publicado en 2017

MULTI-MODAL DATA FUSION SCHEMES FOR INTEGRATED CLASSIFICATION OF IMAGING AND NON-IMAGING BIOMEDICAL DATA.

artículo científico publicado en 2011

Markov random field driven region-based active contour model (MaRACel): application to medical image segmentation

artículo científico publicado en 2010

Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features

artículo científico publicado en 2014

Multi-Pass Adaptive Voting for Nuclei Detection in Histopathological Images

artículo científico publicado en 2016

Multi-attribute non-initializing texture reconstruction based active shape model (MANTRA)

artículo científico publicado en 2008

Multi-field-of-view framework for distinguishing tumor grade in ER+ breast cancer from entire histopathology slides

artículo científico publicado en 2013

Multi-kernel graph embedding for detection, Gleason grading of prostate cancer via MRI/MRS

artículo científico publicado en 2012

Multiattribute probabilistic prostate elastic registration (MAPPER): application to fusion of ultrasound and magnetic resonance imaging

artículo científico publicado en 2015

Multifeature Landmark-Free Active Appearance Models: Application to Prostate MRI Segmentation ⬇️

artículo científico publicado el 30 de mayo de 2012

Multimodal wavelet embedding representation for data combination (MaWERiC): integrating magnetic resonance imaging and spectroscopy for prostate cancer detection

artículo científico publicado en 2011

Multisite evaluation of radiomic feature reproducibility and discriminability for identifying peripheral zone prostate tumors on MRI

scientific article published on 01 April 2019

NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures

artículo científico publicado en 2014

New methods of MR image intensity standardization via generalized scale

artículo científico publicado en 2006

Novel PCA-VIP scheme for ranking MRI protocols and identifying computer-extracted MRI measurements associated with central gland and peripheral zone prostate tumors

artículo científico publicado en 2014

Novel morphometric based classification via diffeomorphic based shape representation using manifold learning

scientific article published on 01 January 2010

Nuclear Shape and Architecture in Benign Fields Predict Biochemical Recurrence in Prostate Cancer Patients Following Radical Prostatectomy: Preliminary Findings.

artículo científico publicado en 2016

Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells

scientific article published on 04 January 2017

Optimization of complex cancer morphology detection using the SIVQ pattern recognition algorithm

artículo científico publicado en 2012

Out-of-Sample Extrapolation utilizing Semi-Supervised Manifold Learning (OSE-SSL): Content Based Image Retrieval for Histopathology Images

artículo científico publicado en 2016

Patient-specific pharmacokinetic parameter estimation on dynamic contrast-enhanced MRI of prostate: Preliminary evaluation of a novel AIF-free estimation method ⬇️

artículo científico publicado en 2016

Predicting classifier performance with limited training data: applications to computer-aided diagnosis in breast and prostate cancer

artículo científico publicado en 2015

Prediction of recurrence in early stage non-small cell lung cancer using computer extracted nuclear features from digital H&E images.

artículo científico publicado en 2017

Prostate shapes on pre-treatment MRI between prostate cancer patients who do and do not undergo biochemical recurrence are different: Preliminary Findings.

artículo científico publicado en 2017

Prostatome: a combined anatomical and disease based MRI atlas of the prostate

artículo científico publicado en 2014

Quantifying Post- Laser Ablation Prostate Therapy Changes on MRI via a Domain-Specific Biomechanical Model: Preliminary Findings

artículo científico publicado en 2016

Quantitative Evaluation of Treatment Related Changes on Multi-Parametric MRI after Laser Interstitial Thermal Therapy of Prostate Cancer

artículo científico publicado en 2013

Quantitative evaluation of multi-parametric MR imaging marker changes post-laser interstitial ablation therapy (LITT) for epilepsy.

artículo científico publicado en 2013

Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy

artículo científico publicado en 2014

Radiogenomic-Based Survival Risk Stratification of Tumor Habitat on Gd-T1w MRI Is Associated with Biological Processes in Glioblastoma

artículo científico publicado en 2020

Radiomic Texture and Shape Descriptors of the Rectal Environment on Post-Chemoradiation T2-Weighted MRI are Associated with Pathologic Tumor Stage Regression in Rectal Cancers: A Retrospective, Multi-Institution Study

artículo científico publicado en 2020

Radiomic features for prostate cancer detection on MRI differ between the transition and peripheral zones: Preliminary findings from a multi-institutional study

artículo científico publicado en 2016

Radiomic features from the peritumoral brain parenchyma on treatment-naïve multi-parametric MR imaging predict long versus short-term survival in glioblastoma multiforme: Preliminary findings.

artículo científico publicado en 2016

Radiomics Analysis on FLT-PET/MRI for Characterization of Early Treatment Response in Renal Cell Carcinoma: A Proof-of-Concept Study

artículo científico publicado en 2016

Radiomics and radiogenomics in lung cancer: A review for the clinician

artículo científico publicado en 2017

Radiomics based targeted radiotherapy planning (Rad-TRaP): a computational framework for prostate cancer treatment planning with MRI.

artículo científico publicado en 2016

Radiomics-based convolutional neural network for brain tumor segmentation on multiparametric magnetic resonance imaging

scientific article published on 01 April 2019

Reimagining T Staging Through Artificial Intelligence and Machine Learning Image Processing Approaches in Digital Pathology

artículo científico publicado en 2020

Reply

scientific article published on 31 August 2017

Reply

artículo científico publicado en 2017

Reply

artículo científico publicado en 2016

Selecting features with group-sparse nonnegative supervised canonical correlation analysis: multimodal prostate cancer prognosis

scientific article published on 01 January 2014

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays

artículo científico publicado en 2014

Semi supervised multi kernel (SeSMiK) graph embedding: identifying aggressive prostate cancer via magnetic resonance imaging and spectroscopy

artículo científico publicado en 2010

Shape Features of the Lesion Habitat to Differentiate Brain Tumor Progression from Pseudoprogression on Routine Multiparametric MRI: A Multisite Study

artículo científico publicado en 2018

Simultaneous segmentation of prostatic zones using Active Appearance Models with multiple coupled levelsets ⬇️

artículo científico publicado el 1 de septiembre de 2013

Single cell qPCR reveals that additional HAND2 and microRNA-1 facilitate the early reprogramming progress of seven-factor-induced human myocytes

artículo científico publicado en 2017

Sparse Non-negative Matrix Factorization (SNMF) based color unmixing for breast histopathological image analysis.

artículo científico publicado en 2015

Spatial Architecture and Arrangement of Tumor-Infiltrating Lymphocytes for Predicting Likelihood of Recurrence in Early-Stage Non-Small Cell Lung Cancer

artículo científico publicado en 2018

Spatial interplay patterns of cancer nuclei and tumor-infiltrating lymphocytes (TILs) predict clinical benefit for immune checkpoint inhibitors

artículo científico publicado en 2022

Spatially aware cell cluster(spACC1) graphs: predicting outcome in oropharyngeal pl6+ tumors

artículo científico publicado en 2013

Spatially weighted mutual information (SWMI) for registration of digitally reconstructed ex vivo whole mount histology and in vivo prostate MRI ⬇️

artículo científico publicado el 1 de enero de 2011

Spatio-temporal texture (SpTeT) for distinguishing vulnerable from stable atherosclerotic plaque on dynamic contrast enhancement (DCE) MRI in a rabbit model

artículo científico publicado en 2014

Special Section Guest Editorial: Digital Pathology

artículo científico publicado en 2017

Spectral embedding based active contour (SEAC) for lesion segmentation on breast dynamic contrast enhanced magnetic resonance imaging.

artículo científico publicado en 2013

Spectral embedding based probabilistic boosting tree (ScEPTre): classifying high dimensional heterogeneous biomedical data

artículo científico publicado en 2009

Stable and Discriminatory Radiomic Features from the Tumor and Its Habitat Associated with Progression-Free Survival in Glioblastoma: A Multi-Institutional Study

artículo científico publicado en 2022

Stacked Sparse Autoencoder (SSAE) for Nuclei Detection on Breast Cancer Histopathology Images

artículo científico publicado en 2015

Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology

artículo científico publicado en 2016

Statistical 3D Prostate Imaging Atlas Construction via Anatomically Constrained Registration

artículo científico publicado en 2013

Supervised multi-view canonical correlation analysis (sMVCCA): integrating histologic and proteomic features for predicting recurrent prostate cancer.

artículo científico publicado en 2014

Supervised regularized canonical correlation analysis: Integrating histologic and proteomic data for predicting biochemical failures ⬇️

artículo científico publicado el 1 de enero de 2011

Supervised regularized canonical correlation analysis: integrating histologic and proteomic measurements for predicting biochemical recurrence following prostate surgery

artículo científico publicado en 2011

Textural kinetics: a novel dynamic contrast-enhanced (DCE)-MRI feature for breast lesion classification.

artículo científico publicado en 2011

Towards improved cancer diagnosis and prognosis using analysis of gene expression data and computer aided imaging

artículo científico publicado en 2009

Training a cell-level classifier for detecting basal-cell carcinoma by combining human visual attention maps with low-level handcrafted features.

artículo científico publicado en 2017

Tumor Habitat-derived Radiomic Features at Pretreatment MRI That Are Prognostic for Progression-free Survival in Glioblastoma Are Associated with Key Morphologic Attributes at Histopathologic Examination: A Feasibility Study

artículo científico publicado en 2020

Variable importance in nonlinear kernels (VINK): classification of digitized histopathology

scientific article published on 01 January 2013

Weighted maximum posterior marginals for random fields using an ensemble of conditional densities from multiple Markov chain Monte Carlo simulations

artículo científico publicado en 2011

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