Lista de obras - Samuele Bovo - Dominio Público Uruguay

A comparative analysis of label-free liquid chromatography-mass spectrometry liver proteomic profiles highlights metabolic differences between pig breeds

scientific article published in PLoS ONE

A comparative genome landscape of mitochondrial DNA insertions into two cattle nuclear genome versions

scientific article published on 04 December 2019

A genome-wide association study for a proxy of intermuscular fat level in the Italian Large White breed identifies genomic regions affecting an important quality parameter for dry-cured hams

artículo científico publicado en 2017

A genomic landscape of mitochondrial DNA insertions in the pig nuclear genome provides evolutionary signatures of interspecies admixture

artículo científico publicado en 2017

A machine learning approach for the identification of population-informative markers from high-throughput genotyping data: application to several pig breeds

artículo científico publicado en 2019

A next generation sequencing approach for targeted Varroa destructor (Acari: Varroidae) mitochondrial DNA analysis based on honey derived environmental DNA

artículo científico publicado en 2019

A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections

artículo científico publicado en 2017

Application of Next Generation Semiconductor-Based Sequencing for the Identification of Apis mellifera Complementary Sex Determiner (csd) Alleles from Honey DNA

artículo científico publicado en 2021

Application of next generation semiconductor based sequencing for species identification in dairy products

article

Application of next generation semiconductor based sequencing to detect the botanical composition of monofloral, polyfloral and honeydew honey

scientific article published on 01 December 2017

Are machine learning based methods suited to address complex biological problems? Lessons from CAGI-5 challenges

artículo científico publicado en 2019

Association between a polymorphism in the IGF2 gene and finishing weight in a commercial rabbit population

artículo científico publicado en 2012

Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4.

artículo científico

Comparative evaluation of genomic inbreeding parameters in seven commercial and autochthonous pig breeds

artículo científico publicado en 2020

Comparative selection signature analyses identify genomic footprints in Reggiana cattle, the traditional breed of the Parmigiano-Reggiano cheese production system

artículo científico publicado en 2020

Deconstructing the pig sex metabolome: Targeted metabolomics in heavy pigs revealed sexual dimorphisms in plasma biomarkers and metabolic pathways

artículo científico publicado en 2015

Dose-response of different dietary leucine levels on growth performance and amino acid metabolism in piglets differing for aminoadipate-semialdehyde synthase genotypes

scientific article published on 06 December 2019

Entomological signatures in honey: an environmental DNA metabarcoding approach can disclose information on plant-sucking insects in agricultural and forest landscapes

artículo científico publicado en 2018

Evaluating the predictions of the protein stability change upon single amino acid substitutions for the FXN CAGI5 challenge

scientific article published on 12 July 2019

Exploiting within‐breed variability in the autochthonous Reggiana breed identified several candidate genes affecting pigmentation‐related traits, stature and udder defects in cattle

artículo científico publicado en 2021

Few mitochondrial DNA sequences are inserted into the turkey (Meleagris gallopavo) nuclear genome: evolutionary analyses and informativity in the domestic lineage

artículo científico publicado en 2018

Genome-wide association studies for 30 haematological and blood clinical-biochemical traits in Large White pigs reveal genomic regions affecting intermediate phenotypes

artículo científico publicado en 2019

Genome-wide association studies for iris pigmentation and heterochromia patterns in Large White pigs

scientific article published on 31 March 2020

Genome-wide association studies for seven production traits highlight genomic regions useful to dissect dry-cured ham quality and production traits in Duroc heavy pigs

article

Genome-wide association studies for the number of teats and teat asymmetry patterns in Large White pigs

artículo científico publicado en 2020

Genome-wide association study for ham weight loss at first salting in Italian Large White pigs: towards the genetic dissection of a key trait for dry-cured ham production

artículo científico publicado en 2016

Genome-wide detection of copy number variants in European autochthonous and commercial pig breeds by whole-genome sequencing of DNA pools identified breed-characterising copy number states

artículo científico publicado en 2020

Genomic diversity, linkage disequilibrium and selection signatures in European local pig breeds assessed with a high density SNP chip

artículo científico publicado en 2019

Haplotype-based genome-wide association studies reveal new loci for haematological and clinical-biochemical parameters in Large White pigs

artículo científico publicado en 2020

Identification of a major locus determining a pigmentation defect in cultivated gilthead seabream (Sparus aurata)

artículo científico publicado en 2020

Metabolomics evidences plasma and serum biomarkers differentiating two heavy pig breeds.

artículo científico publicado en 2016

Microscopic ossicle analyses and the complete mitochondrial genome sequence of Holothuria (Roweothuria) polii (Echinodermata; Holothuroidea) provide new information to support the phylogenetic positioning of this sea cucumber species

scientific article published on 19 December 2019

NET-GE: a web-server for NETwork-based human gene enrichment

artículo científico

NETGE-PLUS: Standard and Network-Based Gene Enrichment Analysis in Human and Model Organisms

scientific article published on 04 February 2020

One Health and Cattle Genetic Resources: Mining More than 500 Cattle Genomes to Identify Variants in Candidate Genes Potentially Affecting Coronavirus Infections

artículo científico publicado en 2022

Predicting venous thromboembolism risk from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges

artículo científico publicado en 2019

Reduced Representation Libraries from DNA Pools Analysed with Next Generation Semiconductor Based-Sequencing to Identify SNPs in Extreme and Divergent Pigs for Back Fat Thickness

artículo científico publicado en 2015

Shotgun metagenomics of honey DNA: Evaluation of a methodological approach to describe a multi-kingdom honey bee derived environmental DNA signature

artículo científico publicado en 2018

Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution

artículo científico publicado en 2019

Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges.

artículo científico publicado en 2017

eDGAR: a database of Disease-Gene Associations with annotated Relationships among genes

artículo científico

Lista de obras de Samuele Bovo

A comparative analysis of label-free liquid chromatography-mass spectrometry liver proteomic profiles highlights metabolic differences between pig breeds

A comparative genome landscape of mitochondrial DNA insertions into two cattle nuclear genome versions

A genome-wide association study for a proxy of intermuscular fat level in the Italian Large White breed identifies genomic regions affecting an important quality parameter for dry-cured hams

A genomic landscape of mitochondrial DNA insertions in the pig nuclear genome provides evolutionary signatures of interspecies admixture

A machine learning approach for the identification of population-informative markers from high-throughput genotyping data: application to several pig breeds

A next generation sequencing approach for targeted Varroa destructor (Acari: Varroidae) mitochondrial DNA analysis based on honey derived environmental DNA

A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections

Application of Next Generation Semiconductor-Based Sequencing for the Identification of Apis mellifera Complementary Sex Determiner (csd) Alleles from Honey DNA

Application of next generation semiconductor based sequencing for species identification in dairy products

Application of next generation semiconductor based sequencing to detect the botanical composition of monofloral, polyfloral and honeydew honey

Are machine learning based methods suited to address complex biological problems? Lessons from CAGI-5 challenges

Association between a polymorphism in the IGF2 gene and finishing weight in a commercial rabbit population

Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4.

Comparative evaluation of genomic inbreeding parameters in seven commercial and autochthonous pig breeds

Comparative selection signature analyses identify genomic footprints in Reggiana cattle, the traditional breed of the Parmigiano-Reggiano cheese production system

Deconstructing the pig sex metabolome: Targeted metabolomics in heavy pigs revealed sexual dimorphisms in plasma biomarkers and metabolic pathways

Dose-response of different dietary leucine levels on growth performance and amino acid metabolism in piglets differing for aminoadipate-semialdehyde synthase genotypes

Entomological signatures in honey: an environmental DNA metabarcoding approach can disclose information on plant-sucking insects in agricultural and forest landscapes

Evaluating the predictions of the protein stability change upon single amino acid substitutions for the FXN CAGI5 challenge

Exploiting within‐breed variability in the autochthonous Reggiana breed identified several candidate genes affecting pigmentation‐related traits, stature and udder defects in cattle

Few mitochondrial DNA sequences are inserted into the turkey (Meleagris gallopavo) nuclear genome: evolutionary analyses and informativity in the domestic lineage

Genome-wide association studies for 30 haematological and blood clinical-biochemical traits in Large White pigs reveal genomic regions affecting intermediate phenotypes

Genome-wide association studies for iris pigmentation and heterochromia patterns in Large White pigs

Genome-wide association studies for seven production traits highlight genomic regions useful to dissect dry-cured ham quality and production traits in Duroc heavy pigs

Genome-wide association studies for the number of teats and teat asymmetry patterns in Large White pigs

Genome-wide association study for ham weight loss at first salting in Italian Large White pigs: towards the genetic dissection of a key trait for dry-cured ham production

Genome-wide detection of copy number variants in European autochthonous and commercial pig breeds by whole-genome sequencing of DNA pools identified breed-characterising copy number states

Genomic diversity, linkage disequilibrium and selection signatures in European local pig breeds assessed with a high density SNP chip

Haplotype-based genome-wide association studies reveal new loci for haematological and clinical-biochemical parameters in Large White pigs

Identification of a major locus determining a pigmentation defect in cultivated gilthead seabream (Sparus aurata)

Metabolomics evidences plasma and serum biomarkers differentiating two heavy pig breeds.

Microscopic ossicle analyses and the complete mitochondrial genome sequence of Holothuria (Roweothuria) polii (Echinodermata; Holothuroidea) provide new information to support the phylogenetic positioning of this sea cucumber species

NET-GE: a web-server for NETwork-based human gene enrichment

NETGE-PLUS: Standard and Network-Based Gene Enrichment Analysis in Human and Model Organisms

One Health and Cattle Genetic Resources: Mining More than 500 Cattle Genomes to Identify Variants in Candidate Genes Potentially Affecting Coronavirus Infections

Predicting venous thromboembolism risk from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges

Reduced Representation Libraries from DNA Pools Analysed with Next Generation Semiconductor Based-Sequencing to Identify SNPs in Extreme and Divergent Pigs for Back Fat Thickness

Shotgun metagenomics of honey DNA: Evaluation of a methodological approach to describe a multi-kingdom honey bee derived environmental DNA signature

Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution

Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges.

eDGAR: a database of Disease-Gene Associations with annotated Relationships among genes