Lista de obras - Ruibang Luo - Dominio Público Uruguay

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

artículo científico publicado en 2017

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

A multi-task convolutional deep neural network for variant calling in single molecule sequencing

scientific article published on 01 March 2019

AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing

Assemblathon 1: a competitive assessment of de novo short read assembly methods

artículo científico publicado en 2011

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

artículo científico publicado en 2013

BALSA: integrated secondary analysis for whole-genome and whole-exome sequencing, accelerated by GPU.

artículo científico publicado en 2014

BASE: a practical de novo assembler for large genomes using long NGS reads

artículo científico publicado en 2016

Building the sequence map of the human pan-genome

artículo científico publicado en 2009

COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly

artículo científico publicado en 2012

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

scholarly article published 28 April 2018

Clinical analysis and pluripotent stem cells-based model reveal possible impacts of ACE2 and lung progenitor cells on infants vulnerable to COVID-19

artículo científico publicado en 2021

De novo assembly of a haplotype-resolved human genome.

artículo científico publicado en 2015

ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell

artículo científico publicado en 2022

Efficient SNP-sensitive alignment and database-assisted SNP calling for low coverage samples

article published in 2012

FaSD-somatic: a fast and accurate somatic SNV detection algorithm for cancer genome sequencing data

artículo científico publicado en 2014

First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans).

artículo científico publicado en 2017

From Peer-Reviewed to Peer-Reproduced in Scholarly Publishing: The Complementary Roles of Data Models and Workflows in Bioinformatics

artículo científico publicado en 2015

Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber.

artículo científico publicado en 2015

HKG: an open genetic variant database of 205 Hong Kong cantonese exomes

artículo científico publicado en 2022

International network of cancer genome projects

artículo científico publicado en 2010

LRSim: A Linked-Reads Simulator Generating Insights for Better Genome Partitioning

artículo científico publicado en 2017

MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices

artículo científico publicado en 2016

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

artículo científico publicado en 2015

MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC).

artículo científico publicado en 2015

Mapping copy number variation by population-scale genome sequencing

artículo científico publicado en 2011

RENET2: high-performance full-text gene-disease relation extraction with iterative training data expansion

artículo científico publicado en 2021

SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner

artículo científico publicado en 2013

SOAP3: ultra-fast GPU-based parallel alignment tool for short reads

artículo científico publicado en 2012

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.

artículo científico publicado en 2014

Sequencing of 50 human exomes reveals adaptation to high altitude

artículo científico publicado en 2010

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

artículo científico publicado en 2012

Skyhawk: An Artificial Neural Network-based discriminator for reviewing clinically significant genomic variants

scholarly article published 1 May 2018

Structural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly

artículo científico publicado en 2011

The DNA methylome of human peripheral blood mononuclear cells

artículo científico publicado en 2010

The oyster genome reveals stress adaptation and complexity of shell formation

artículo científico publicado en 2012

database.bio: a web application for interpreting human variations

artículo científico publicado en 2015

Lista de obras de Ruibang Luo

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

A multi-task convolutional deep neural network for variant calling in single molecule sequencing

AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing

Assemblathon 1: a competitive assessment of de novo short read assembly methods

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

BALSA: integrated secondary analysis for whole-genome and whole-exome sequencing, accelerated by GPU.

BASE: a practical de novo assembler for large genomes using long NGS reads

Building the sequence map of the human pan-genome

COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

Clinical analysis and pluripotent stem cells-based model reveal possible impacts of ACE2 and lung progenitor cells on infants vulnerable to COVID-19

De novo assembly of a haplotype-resolved human genome.

ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell

Efficient SNP-sensitive alignment and database-assisted SNP calling for low coverage samples

FaSD-somatic: a fast and accurate somatic SNV detection algorithm for cancer genome sequencing data

First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans).

From Peer-Reviewed to Peer-Reproduced in Scholarly Publishing: The Complementary Roles of Data Models and Workflows in Bioinformatics

Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber.

HKG: an open genetic variant database of 205 Hong Kong cantonese exomes

International network of cancer genome projects

LRSim: A Linked-Reads Simulator Generating Insights for Better Genome Partitioning

MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC).

Mapping copy number variation by population-scale genome sequencing

RENET2: high-performance full-text gene-disease relation extraction with iterative training data expansion

SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner

SOAP3: ultra-fast GPU-based parallel alignment tool for short reads

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.

Sequencing of 50 human exomes reveals adaptation to high altitude

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

Skyhawk: An Artificial Neural Network-based discriminator for reviewing clinically significant genomic variants

Structural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly

The DNA methylome of human peripheral blood mononuclear cells

The oyster genome reveals stress adaptation and complexity of shell formation

database.bio: a web application for interpreting human variations