Lista de obras - Christian H Ahrens - Dominio Público Uruguay

A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli

artículo científico publicado en 2015

A high-quality catalog of the Drosophila melanogaster proteome

artículo científico publicado en 2007

A link between arabinose utilization and oxalotrophy in Bradyrhizobium japonicum.

scientific article published on 24 January 2014

A mighty small heart: the cardiac proteome of adult Drosophila melanogaster

artículo científico publicado en 2011

An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in

scientific article published on 07 May 2019

An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1

scientific article published on 30 October 2020

An integrated proteomics and transcriptomics reference data set provides new insights into the Bradyrhizobium japonicum bacteroid metabolism in soybean root nodules

artículo científico publicado en 2010

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.

artículo científico publicado en 2017

Biofilm Formation Potential of Heat-Resistant Escherichia coli Dairy Isolates and the Complete Genome of Multidrug-Resistant, Heat-Resistant Strain FAM21845

artículo científico publicado en 2017

Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover ⬇️

artículo científico publicado el 4 de septiembre de 2012

Comparative Genomics of Completely Sequenced Lactobacillus helveticus Genomes Provides Insights into Strain-Specific Genes and Resolves Metagenomics Data Down to the Strain Level.

artículo científico publicado en 2018

Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes

artículo científico publicado en 2009

Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi

artículo científico publicado en 2017

Complete genome sequence of Pseudomonas citronellolis P3B5, a candidate for microbial phyllo-remediation of hydrocarbon-contaminated sites.

artículo científico publicado en 2016

Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function.

artículo científico publicado en 2009

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

artículo científico publicado en 2013

Experimental Peptide Identification Repository (EPIR): an integrated peptide-centric platform for validation and mining of tandem mass spectrometry data

artículo científico publicado en 2004

Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

artículo científico publicado en 2016

Generating and navigating proteome maps using mass spectrometry.

artículo científico publicado en 2010

Genome-Wide Transcript Analysis of Bradyrhizobium japonicum Bacteroids in Soybean Root Nodules

article

Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation

artículo científico publicado en 2016

Identification and characterization of a putative origin of DNA replication in the genome of a baculovirus pathogenic for Orgyia pseudotsugata

artículo científico publicado en 1993

Identification and characterization of a second putative origin of DNA replication in a baculovirus of Orgyia pseudotsugata.

artículo científico publicado en 1995

Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster

artículo científico publicado en 2009

Identification of essential trans-acting regions required for DNA replication of the Orgyia pseudotsugata multinucleocapsid nuclear polyhedrosis virus: lef-1 is an essential replication gene.

artículo científico publicado en 1995

Identification of genes involved in DNA replication of the Autographa californica baculovirus.

artículo científico publicado en 1994

Identification, sequence, and transcriptional analysis of lef-3, a gene essential for Orgyia pseudotsugata baculovirus DNA replication.

artículo científico publicado en 1995

Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data

artículo científico publicado en 2014

Indicative bacterial communities and taxa of disease-suppressing and growth-promoting composts and their associations to the rhizoplane

artículo científico publicado en 2021

Linking Comparative Genomics of Nine Potato-Associated Pseudomonas Isolates With Their Differing Biocontrol Potential Against Late Blight

scientific article published on 30 April 2020

Long-Chain Alkyl Cyanides: Unprecedented Volatile Compounds Released by Pseudomonas and Micromonospora Bacteria.

artículo científico publicado en 2017

Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system

scientific article published on 25 June 2019

Metabolomic Profiling of Bradyrhizobium diazoefficiens-Induced Root Nodules Reveals Both Host Plant-Specific and Developmental Signatures

scientific article published on 27 May 2016

Metabolomics and Transcriptomics Identify Multiple Downstream Targets of Paraburkholderia phymatum σ54 During Symbiosis with Phaseolus vulgaris. ⬇️

artículo científico publicado en 2018

Model organism proteomics

artículo científico publicado en 2010

PeptideClassifier for protein inference and targeted quantitative proteomics

scientific article published on 01 July 2010

Protein and gene model inference based on statistical modeling in k-partite graphs.

artículo científico publicado en 2010

Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism

artículo científico publicado en 2014

Proteomics analysis of Psychotria leaf nodule symbiosis: improved genome annotation and metabolic predictions.

artículo científico publicado en 2013

Protter: interactive protein feature visualization and integration with experimental proteomic data

artículo científico publicado en 2013

Pseudomonas orientalis F9: A Potent Antagonist against Phytopathogens with Phytotoxic Effect in the Apple Flower.

artículo científico publicado en 2018

Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats

artículo científico publicado en 2018

Quantitative proteomics: a central technology for systems biology

artículo científico publicado en 2009

Response of Burkholderia cenocepacia H111 to micro-oxia.

artículo científico publicado en 2013

Seasonal Dynamics of Glyphosate and AMPA in Lake Greifensee: Rapid Microbial Degradation in the Epilimnion During Summer

article

Short communication: Heat-resistant Escherichia coli as potential persistent reservoir of extended-spectrum β-lactamases and Shiga toxin-encoding phages in dairy

artículo científico publicado en 2016

Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast Metschnikowia pulcherrima

scientific article published on 20 May 2019

The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111.

artículo científico publicado en 2012

The DNA polymerase and helicase genes of a baculovirus of Orgyia pseudosugata.

artículo científico publicado en 1996

The HUPO initiative on Model Organism Proteomes, iMOP.

artículo científico publicado en 2012

The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry

artículo científico publicado en 2007

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

artículo científico publicado en 2016

The hemolymph proteome of fed and starved Drosophila larvae

artículo científico publicado en 2013

The sequence of the Orgyia pseudotsugata multinucleocapsid nuclear polyhedrosis virus genome.

artículo científico publicado en 1997

Towards the characterization of the hidden world of small proteins in Staphylococcus aureus, a proteogenomics approach

artículo científico publicado en 2021

Unraveling the small proteome of the plant symbiont by ribosome profiling and proteogenomics

artículo científico publicado en 2023

Volatile Organic Compounds from Native Potato-associated Pseudomonas as Potential Anti-oomycete Agents

artículo científico publicado en 2015

WNT1 inducible signaling pathway protein 3, WISP-3, a novel target gene in colorectal carcinomas with microsatellite instability

artículo científico publicado en 2001

σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

artículo científico publicado en 2015

Lista de obras de Christian H Ahrens

A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli

A high-quality catalog of the Drosophila melanogaster proteome

A link between arabinose utilization and oxalotrophy in Bradyrhizobium japonicum.

A mighty small heart: the cardiac proteome of adult Drosophila melanogaster

An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in

An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1

An integrated proteomics and transcriptomics reference data set provides new insights into the Bradyrhizobium japonicum bacteroid metabolism in soybean root nodules

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.

Biofilm Formation Potential of Heat-Resistant Escherichia coli Dairy Isolates and the Complete Genome of Multidrug-Resistant, Heat-Resistant Strain FAM21845

Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover ⬇️

Comparative Genomics of Completely Sequenced Lactobacillus helveticus Genomes Provides Insights into Strain-Specific Genes and Resolves Metagenomics Data Down to the Strain Level.

Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes

Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi

Complete genome sequence of Pseudomonas citronellolis P3B5, a candidate for microbial phyllo-remediation of hydrocarbon-contaminated sites.

Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function.

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

Experimental Peptide Identification Repository (EPIR): an integrated peptide-centric platform for validation and mining of tandem mass spectrometry data

Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

Generating and navigating proteome maps using mass spectrometry.

Genome-Wide Transcript Analysis of Bradyrhizobium japonicum Bacteroids in Soybean Root Nodules

Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation

Identification and characterization of a putative origin of DNA replication in the genome of a baculovirus pathogenic for Orgyia pseudotsugata

Identification and characterization of a second putative origin of DNA replication in a baculovirus of Orgyia pseudotsugata.

Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster

Identification of essential trans-acting regions required for DNA replication of the Orgyia pseudotsugata multinucleocapsid nuclear polyhedrosis virus: lef-1 is an essential replication gene.

Identification of genes involved in DNA replication of the Autographa californica baculovirus.

Identification, sequence, and transcriptional analysis of lef-3, a gene essential for Orgyia pseudotsugata baculovirus DNA replication.

Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data

Indicative bacterial communities and taxa of disease-suppressing and growth-promoting composts and their associations to the rhizoplane

Linking Comparative Genomics of Nine Potato-Associated Pseudomonas Isolates With Their Differing Biocontrol Potential Against Late Blight

Long-Chain Alkyl Cyanides: Unprecedented Volatile Compounds Released by Pseudomonas and Micromonospora Bacteria.

Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system

Metabolomic Profiling of Bradyrhizobium diazoefficiens-Induced Root Nodules Reveals Both Host Plant-Specific and Developmental Signatures

Metabolomics and Transcriptomics Identify Multiple Downstream Targets of Paraburkholderia phymatum σ54 During Symbiosis with Phaseolus vulgaris. ⬇️

Model organism proteomics

PeptideClassifier for protein inference and targeted quantitative proteomics

Protein and gene model inference based on statistical modeling in k-partite graphs.

Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism

Proteomics analysis of Psychotria leaf nodule symbiosis: improved genome annotation and metabolic predictions.

Protter: interactive protein feature visualization and integration with experimental proteomic data

Pseudomonas orientalis F9: A Potent Antagonist against Phytopathogens with Phytotoxic Effect in the Apple Flower.

Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats

Quantitative proteomics: a central technology for systems biology

Response of Burkholderia cenocepacia H111 to micro-oxia.

Seasonal Dynamics of Glyphosate and AMPA in Lake Greifensee: Rapid Microbial Degradation in the Epilimnion During Summer

Short communication: Heat-resistant Escherichia coli as potential persistent reservoir of extended-spectrum β-lactamases and Shiga toxin-encoding phages in dairy

Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast Metschnikowia pulcherrima

The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111.

The DNA polymerase and helicase genes of a baculovirus of Orgyia pseudosugata.

The HUPO initiative on Model Organism Proteomes, iMOP.

The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

The hemolymph proteome of fed and starved Drosophila larvae

The sequence of the Orgyia pseudotsugata multinucleocapsid nuclear polyhedrosis virus genome.

Towards the characterization of the hidden world of small proteins in Staphylococcus aureus, a proteogenomics approach

Unraveling the small proteome of the plant symbiont by ribosome profiling and proteogenomics

Volatile Organic Compounds from Native Potato-associated Pseudomonas as Potential Anti-oomycete Agents

WNT1 inducible signaling pathway protein 3, WISP-3, a novel target gene in colorectal carcinomas with microsatellite instability

σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111