Lista de obras - Yannick Bomble - Dominio Público Uruguay

Applications of computational science for understanding enzymatic deconstruction of cellulose

scientific article published on 17 December 2010

Bayesian inference of metabolic kinetics from genome-scale multiomics data

artículo científico publicado en 2019

Cofactor Specificity of the Bifunctional Alcohol and Aldehyde Dehydrogenase (AdhE) in Wild-Type and Mutant Clostridium thermocellum and Thermoanaerobacterium saccharolyticum

artículo científico publicado en 2015

Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

artículo científico publicado en 2016

Coupled-cluster methods including noniterative corrections for quadruple excitations

artículo científico publicado en 2005

Deletion of Caldicellulosiruptor bescii CelA reveals its crucial role in the deconstruction of lignocellulosic biomass

artículo científico publicado en 2014

Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities.

artículo científico publicado en 2016

Engineering the N-terminal end of CelA results in improved performance and growth of Caldicellulosiruptor bescii on crystalline cellulose

artículo científico publicado en 2016

Equation-of-motion coupled-cluster methods for ionized states with an approximate treatment of triple excitations.

artículo científico publicado en 2005

Experimental and modeling studies of an unusual water-filled pore structure with possible mechanistic implications in family 48 cellulases

artículo científico publicado en 2014

Expression of the Acidothermus cellulolyticus E1 endoglucanase in Caldicellulosiruptor bescii enhances its ability to deconstruct crystalline cellulose.

artículo científico publicado en 2015

Factors Contributing to the Accuracy of Harmonic Force Field Calculations for Water

artículo científico publicado en 2007

Glycosylation of hyperthermostable designer cellulosome components yields enhanced stability and cellulose hydrolysis

scientific article published on 17 February 2020

Heterologous expression of family 10 xylanases from Acidothermus cellulolyticus enhances the exoproteome of Caldicellulosiruptor bescii and growth on xylan substrates

artículo científico publicado en 2016

High activity CAZyme cassette for improving biomass degradation in thermophiles

artículo científico publicado en 2018

High-accuracy extrapolated ab initio thermochemistry. II. Minor improvements to the protocol and a vital simplification

artículo científico publicado en 2006

Homologous expression of the Caldicellulosiruptor bescii CelA reveals that the extracellular protein is glycosylated

artículo científico publicado en 2015

Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase

artículo científico publicado en 2010

Improving activity of minicellulosomes by integration of intra- and intermolecular synergies.

artículo científico publicado en 2013

Modeling the self-assembly of the cellulosome enzyme complex

artículo científico publicado en 2010

Molecular dynamics simulations of the interaction of glucose with imidazole in aqueous solution

scientific article published on 16 December 2011

Molecular-level origins of biomass recalcitrance: decrystallization free energies for four common cellulose polymorphs

artículo científico publicado en 2011

Multifunctional Cellulolytic Enzymes Outperform Processive Fungal Cellulases for Coproduction of Nanocellulose and Biofuels

artículo científico publicado en 2017

Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation

artículo científico publicado en 2011

Multiscale modeling of nucleic acids: insights into DNA flexibility

artículo científico publicado en 2008

Natural diversity of glycoside hydrolase family 48 exoglucanases: insights from structure

artículo científico publicado en 2017

New perspective on glycoside hydrolase binding to lignin from pretreated corn stover

artículo científico publicado en 2015

On the vertical excitation energy of cyclopentadiene

artículo científico publicado en 2004

Predicting enzyme adsorption to lignin films by calculating enzyme surface hydrophobicity

artículo científico publicado en 2014

Prediction of reaction knockouts to maximize succinate production by Actinobacillus succinogenes

artículo científico publicado en 2018

Response to Comment on "Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA"

artículo científico publicado en 2014

Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA

artículo científico publicado en 2013

Selective One-Dimensional 13C-13C Spin-Diffusion Solid-State Nuclear Magnetic Resonance Methods to Probe Spatial Arrangements in Biopolymers Including Plant Cell Walls, Peptides, and Spider Silk

artículo científico publicado en 2020

Strategies to reduce end-product inhibition in family 48 glycoside hydrolases

artículo científico publicado en 2015

Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex

artículo científico publicado en 2012

Structure of a Thermobifida fusca lytic polysaccharide monooxygenase and mutagenesis of key residues

artículo científico publicado en 2017

The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein

artículo científico publicado en 2010

The catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase

artículo científico publicado en 2015

The energy landscape for the interaction of the family 1 carbohydrate-binding module and the cellulose surface is altered by hydrolyzed glycosidic bonds.

artículo científico publicado en 2009

The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A

artículo científico publicado en 2010

Thermochemistry of key soot formation intermediates: C3H3 isomers

scientific article published on 03 April 2007

Threshold detection using indicator-displacement assays: an application in the analysis of malate in Pinot Noir grapes.

artículo científico publicado en 2004

Lista de obras de Yannick Bomble

Applications of computational science for understanding enzymatic deconstruction of cellulose

Bayesian inference of metabolic kinetics from genome-scale multiomics data

Cofactor Specificity of the Bifunctional Alcohol and Aldehyde Dehydrogenase (AdhE) in Wild-Type and Mutant Clostridium thermocellum and Thermoanaerobacterium saccharolyticum

Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

Coupled-cluster methods including noniterative corrections for quadruple excitations

Deletion of Caldicellulosiruptor bescii CelA reveals its crucial role in the deconstruction of lignocellulosic biomass

Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities.

Engineering the N-terminal end of CelA results in improved performance and growth of Caldicellulosiruptor bescii on crystalline cellulose

Equation-of-motion coupled-cluster methods for ionized states with an approximate treatment of triple excitations.

Experimental and modeling studies of an unusual water-filled pore structure with possible mechanistic implications in family 48 cellulases

Expression of the Acidothermus cellulolyticus E1 endoglucanase in Caldicellulosiruptor bescii enhances its ability to deconstruct crystalline cellulose.

Factors Contributing to the Accuracy of Harmonic Force Field Calculations for Water

Glycosylation of hyperthermostable designer cellulosome components yields enhanced stability and cellulose hydrolysis

Heterologous expression of family 10 xylanases from Acidothermus cellulolyticus enhances the exoproteome of Caldicellulosiruptor bescii and growth on xylan substrates

High activity CAZyme cassette for improving biomass degradation in thermophiles

High-accuracy extrapolated ab initio thermochemistry. II. Minor improvements to the protocol and a vital simplification

Homologous expression of the Caldicellulosiruptor bescii CelA reveals that the extracellular protein is glycosylated

Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase

Improving activity of minicellulosomes by integration of intra- and intermolecular synergies.

Modeling the self-assembly of the cellulosome enzyme complex

Molecular dynamics simulations of the interaction of glucose with imidazole in aqueous solution

Molecular-level origins of biomass recalcitrance: decrystallization free energies for four common cellulose polymorphs

Multifunctional Cellulolytic Enzymes Outperform Processive Fungal Cellulases for Coproduction of Nanocellulose and Biofuels

Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation

Multiscale modeling of nucleic acids: insights into DNA flexibility

Natural diversity of glycoside hydrolase family 48 exoglucanases: insights from structure

New perspective on glycoside hydrolase binding to lignin from pretreated corn stover

On the vertical excitation energy of cyclopentadiene

Predicting enzyme adsorption to lignin films by calculating enzyme surface hydrophobicity

Prediction of reaction knockouts to maximize succinate production by Actinobacillus succinogenes

Response to Comment on "Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA"

Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA

Selective One-Dimensional 13C-13C Spin-Diffusion Solid-State Nuclear Magnetic Resonance Methods to Probe Spatial Arrangements in Biopolymers Including Plant Cell Walls, Peptides, and Spider Silk

Strategies to reduce end-product inhibition in family 48 glycoside hydrolases

Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex

Structure of a Thermobifida fusca lytic polysaccharide monooxygenase and mutagenesis of key residues

The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein

The catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase

The energy landscape for the interaction of the family 1 carbohydrate-binding module and the cellulose surface is altered by hydrolyzed glycosidic bonds.

The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A

Thermochemistry of key soot formation intermediates: C3H3 isomers

Threshold detection using indicator-displacement assays: an application in the analysis of malate in Pinot Noir grapes.