Lista de obras - Ludovic Cottret - Dominio Público Uruguay

A Laser Dissection-RNAseq Analysis Highlights the Activation of Cytokinin Pathways by Nod Factors in the Medicago truncatula Root Epidermis

artículo científico publicado en 2016

A Resource Allocation Trade-Off between Virulence and Proliferation Drives Metabolic Versatility in the Plant Pathogen Ralstonia solanacearum

artículo científico publicado en 2016

A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations

artículo científico publicado en 2011

Algorithms and complexity of enumerating minimal precursor sets in genome-wide metabolic networks

artículo científico publicado en 2012

An ancestral signalling pathway is conserved in intracellular symbioses-forming plant lineages

artículo científico publicado en 2020

An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing

artículo científico publicado en 2014

An introduction to metabolic networks and their structural analysis

artículo científico publicado en 2008

Control of primary metabolism by a virulence regulatory network promotes robustness in a plant pathogen

artículo científico publicado en 2018

CycADS: an annotation database system to ease the development and update of BioCyc databases

artículo científico publicado en 2011

Deciphering the connectivity structure of biological networks using MixNet

artículo científico publicado en 2009

EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome

artículo científico publicado en 2020

Evolutionary History of Plant LysM Receptor Proteins Related to Root Endosymbiosis

article

Exploration of the core metabolism of symbiotic bacteria

artículo científico publicado en 2012

Family-Companion: analyse, visualise, browse, query and share your homology clusters

FlexFlux: combining metabolic flux and regulatory network analyses

artículo científico publicado en 2015

Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

scientific article published on 31 March 2020

Genomic Prediction of Sunflower Hybrids Oil Content.

artículo científico publicado en 2017

Graph methods for the investigation of metabolic networks in parasitology

artículo científico publicado en 2010

Graph-based analysis of the metabolic exchanges between two co-resident intracellular symbionts, Baumannia cicadellinicola and Sulcia muelleri, with their insect host, Homalodisca coagulata

artículo científico publicado en 2010

Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes

artículo científico publicado en 2014

LysM Receptor-Like Kinase and LysM Receptor-Like Protein Families: An Update on Phylogeny and Functional Characterization

artículo científico publicado en 2018

MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

artículo científico publicado en 2010

MetExplore: collaborative edition and exploration of metabolic networks

artículo científico publicado en 2018

MetExploreViz: web component for interactive metabolic network visualization

artículo científico publicado en 2017

Metabolic network visualization eliminating node redundance and preserving metabolic pathways

artículo científico publicado en 2007

Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula

article

Sunflower resistance to multiple downy mildew pathotypes revealed by recognition of conserved effectors of the oomycete Plasmopara halstedii

scientific article published on 07 January 2019

Systemic analysis of the symbiotic function of Buchnera aphidicola, the primary endosymbiont of the pea aphid Acyrthosiphon pisum

artículo científico publicado en 2009

Systrip: A Visual Environment for the Investigation of Time-series Data in the Context of Metabolic Networks

Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure

artículo científico publicado en 2013

Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets

article

The Rosa genome provides new insights into the domestication of modern roses. ⬇️

artículo científico publicado en 2018

The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

artículo científico publicado en 2017

Transcriptome database resource and gene expression atlas for the rose

artículo científico publicado en 2012

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

artículo científico publicado en 2014

Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining

artículo científico publicado en 2010

Lista de obras de Ludovic Cottret

A Laser Dissection-RNAseq Analysis Highlights the Activation of Cytokinin Pathways by Nod Factors in the Medicago truncatula Root Epidermis

A Resource Allocation Trade-Off between Virulence and Proliferation Drives Metabolic Versatility in the Plant Pathogen Ralstonia solanacearum

A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations

Algorithms and complexity of enumerating minimal precursor sets in genome-wide metabolic networks

An ancestral signalling pathway is conserved in intracellular symbioses-forming plant lineages

An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing

An introduction to metabolic networks and their structural analysis

Control of primary metabolism by a virulence regulatory network promotes robustness in a plant pathogen

CycADS: an annotation database system to ease the development and update of BioCyc databases

Deciphering the connectivity structure of biological networks using MixNet

EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome

Evolutionary History of Plant LysM Receptor Proteins Related to Root Endosymbiosis

Exploration of the core metabolism of symbiotic bacteria

Family-Companion: analyse, visualise, browse, query and share your homology clusters

FlexFlux: combining metabolic flux and regulatory network analyses

Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

Genomic Prediction of Sunflower Hybrids Oil Content.

Graph methods for the investigation of metabolic networks in parasitology

Graph-based analysis of the metabolic exchanges between two co-resident intracellular symbionts, Baumannia cicadellinicola and Sulcia muelleri, with their insect host, Homalodisca coagulata

Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes

LysM Receptor-Like Kinase and LysM Receptor-Like Protein Families: An Update on Phylogeny and Functional Characterization

MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

MetExplore: collaborative edition and exploration of metabolic networks

MetExploreViz: web component for interactive metabolic network visualization

Metabolic network visualization eliminating node redundance and preserving metabolic pathways

Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula

Sunflower resistance to multiple downy mildew pathotypes revealed by recognition of conserved effectors of the oomycete Plasmopara halstedii

Systemic analysis of the symbiotic function of Buchnera aphidicola, the primary endosymbiont of the pea aphid Acyrthosiphon pisum

Systrip: A Visual Environment for the Investigation of Time-series Data in the Context of Metabolic Networks

Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure

Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets

The Rosa genome provides new insights into the domestication of modern roses. ⬇️

The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

Transcriptome database resource and gene expression atlas for the rose

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining