Lista de obras - David A. Matthews - Dominio Público Uruguay

A comparison of host gene expression signatures associated with infection in vitro by the Makona and Ecran (Mayinga) variants of Ebola virus.

scientific article published on 27 February 2017

A role for transportin in the nuclear import of adenovirus core proteins and DNA.

artículo científico publicado en 2007

Adenoviral protein V promotes a process of viral assembly through nucleophosmin 1.

artículo científico publicado en 2012

Adenovirus core protein VII contains distinct sequences that mediate targeting to the nucleus and nucleolus, and colocalization with human chromosomes

artículo científico publicado en 2003

Adenovirus protein-protein interactions: hexon and protein VI.

artículo científico publicado en 1994

Amplicon based MinION sequencing of SARS-CoV-2 and metagenomic characterisation of nasopharyngeal swabs from patients with COVID-19

scientific article (preprint)

Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers

artículo científico publicado en 2022

Analysis of an Ebola virus disease survivor whose host and viral markers were predictive of death indicates the effectiveness of medical countermeasures and supportive care

artículo científico publicado en 2021

Analysis of purified wild type and mutant adenovirus particles by SILAC based quantitative proteomics

artículo científico publicado en 2014

Analysis of relatedness of subgroup A respiratory syncytial viruses isolated worldwide.

artículo científico publicado en 1992

Characterisation of the transcriptome and proteome of SARS-CoV-2 reveals a cell passage induced in-frame deletion of the furin-like cleavage site from the spike glycoprotein

artículo científico publicado en 2020

Characterisation of the transcriptome and proteome of SARS-CoV-2 using direct RNA sequencing and tandem mass spectrometry reveals evidence for a cell passage induced in-frame deletion in the spike glycoprotein that removes the furin-like cleavage si

artículo científico publicado en 2020

Comparison between the interactions of adenovirus-derived peptides with plasmid DNA and their role in gene delivery mediated by liposome-peptide-DNA virus-like nanoparticles

artículo científico publicado en 2003

Comparison of protein expression during wild-type, and E1B-55k-deletion, adenovirus infection using quantitative time-course proteomics

artículo científico publicado en 2017

Core labeling of adenovirus with EGFP.

artículo científico publicado en 2006

De novo derivation of proteomes from transcriptomes for transcript and protein identification

artículo científico publicado en 2012

Deep Sequencing of RNA from Blood and Oral Swab Samples Reveals the Presence of Nucleic Acid from a Number of Pathogens in Patients with Acute Ebola Virus Disease and Is Consistent with Bacterial Translocation across the Gut.

artículo científico

Deep splicing plasticity of the human adenovirus type 5 transcriptome drives virus evolution

artículo científico publicado en 2020

Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity ⬇️

artículo científico publicado en 2014

Elucidation of the Ebola virus VP24 cellular interactome and disruption of virus biology through targeted inhibition of host-cell protein function ⬇️

artículo científico publicado en 2014

Factors affecting de novo RNA synthesis and back-priming by the respiratory syncytial virus polymerase

artículo científico publicado en 2014

Frequent polymerase errors observed in a restricted area of clones derived from the attachment (G) protein gene of respiratory syncytial virus.

artículo científico publicado en 1993

Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics.

artículo científico publicado en 2015

Genotyping coronaviruses associated with feline infectious peritonitis.

artículo científico publicado en 2015

High throughput discovery of protein variants using proteomics informed by transcriptomics.

artículo científico publicado en 2018

High-throughput quantitative proteomic analysis of dengue virus type 2 infected A549 cells

artículo científico publicado en 2014

Identification of Epstein-Barr Virus Replication Proteins in Burkitt's Lymphoma Cells

artículo científico publicado en 2015

Identification of mutations contributing to the reduced virulence of a modified strain of respiratory syncytial virus

artículo científico publicado en 1996

Impact of voluntary risk-mitigation behaviour on transmission of the Omicron SARS-CoV-2 variant in England

artículo científico publicado en 2022

In vitro dynamic visualization analysis of fluorescently labeled minor capsid protein IX and core protein V by simultaneous detection

artículo científico publicado en 2009

Investigating the Influence of Ribavirin on Human Respiratory Syncytial Virus RNA Synthesis by Using a High-Resolution Transcriptome Sequencing Approach ⬇️

artículo científico publicado en 2015

Mitochondrial protein p32 can accumulate in the nucleus.

artículo científico publicado en 2001

Nanopore ReCappable sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs

artículo científico publicado en 2022

Neuropilin-1 is a host factor for SARS-CoV-2 infection

artículo científico publicado en 2020

Nucleolar protein upstream binding factor is sequestered into adenovirus DNA replication centres during infection without affecting RNA polymerase I location or ablating rRNA synthesis

artículo científico publicado en 2006

Nucleolar proteomics and viral infection

artículo científico publicado en 2010

PITDB: a database of translated genomic elements.

artículo científico publicado en 2017

Precursor of human adenovirus core polypeptide Mu targets the nucleolus and modulates the expression of E2 proteins

artículo científico publicado en 2004

Proteomics analysis of the nucleolus in adenovirus-infected cells

artículo científico publicado en 2009

Proteomics informed by transcriptomics for characterising active transposable elements and genome annotation in Aedes aegypti.

artículo científico publicado en 2017

Proteomics informed by transcriptomics for characterising differential cellular susceptibility to Nelson Bay orthoreovirus infection

artículo científico publicado en 2017

Proteomics informed by transcriptomics reveals Hendra virus sensitizes bat cells to TRAIL-mediated apoptosis

artículo científico publicado en 2014

Proteomics technique opens new frontiers in mobilome research

artículo científico publicado en 2017

Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells

artículo científico publicado en 2010

Real-time, portable genome sequencing for Ebola surveillance

artículo científico publicado en 2016

Relationship between adenovirus DNA replication proteins and nucleolar proteins B23.1 and B23.2.

artículo científico publicado en 2007

Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2

artículo científico publicado en 2022

Temporal and spatial analysis of the 2014-2015 Ebola virus outbreak in West Africa

artículo científico publicado en 2015

The Herpesvirus Saimiri open reading frame 73 gene product interacts with the cellular protein p32.

artículo científico publicado en 2002

The herpesvirus saimiri ORF73 gene product interacts with host-cell mitotic chromosomes and self-associates via its C terminus

artículo científico publicado en 2004

The interactome of the human respiratory syncytial virus NS1 protein highlights multiple effects on host cell biology

artículo científico publicado en 2012

The nucleotide sequences of intergenic regions between nine genes of pneumonia virus of mice establish the physical order of these genes in the viral genome

artículo científico publicado en 1991

The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation

artículo científico publicado en 1999

Transcriptomic signatures differentiate survival from fatal outcomes in humans infected with Ebola virus

scientific article published on 19 January 2017

Upstream-binding factor is sequestered into herpes simplex virus type 1 replication compartments

artículo científico publicado en 2009

Using SILAC and quantitative proteomics to investigate the interactions between viral and host proteomes

artículo científico

Virus genomes reveal factors that spread and sustained the Ebola epidemic

artículo científico publicado en 2017

What is new in the nucleolus?: workshop on the nucleolus: new perspectives

artículo científico publicado en 2006

Zika Virus Infection Preferentially Counterbalances Human Peripheral Monocyte and/or NK Cell Activity.

artículo científico publicado en 2018

Lista de obras de David A. Matthews

A comparison of host gene expression signatures associated with infection in vitro by the Makona and Ecran (Mayinga) variants of Ebola virus.

A role for transportin in the nuclear import of adenovirus core proteins and DNA.

Adenoviral protein V promotes a process of viral assembly through nucleophosmin 1.

Adenovirus core protein VII contains distinct sequences that mediate targeting to the nucleus and nucleolus, and colocalization with human chromosomes

Adenovirus protein-protein interactions: hexon and protein VI.

Amplicon based MinION sequencing of SARS-CoV-2 and metagenomic characterisation of nasopharyngeal swabs from patients with COVID-19

Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers

Analysis of an Ebola virus disease survivor whose host and viral markers were predictive of death indicates the effectiveness of medical countermeasures and supportive care

Analysis of purified wild type and mutant adenovirus particles by SILAC based quantitative proteomics

Analysis of relatedness of subgroup A respiratory syncytial viruses isolated worldwide.

Characterisation of the transcriptome and proteome of SARS-CoV-2 reveals a cell passage induced in-frame deletion of the furin-like cleavage site from the spike glycoprotein

Characterisation of the transcriptome and proteome of SARS-CoV-2 using direct RNA sequencing and tandem mass spectrometry reveals evidence for a cell passage induced in-frame deletion in the spike glycoprotein that removes the furin-like cleavage si

Comparison between the interactions of adenovirus-derived peptides with plasmid DNA and their role in gene delivery mediated by liposome-peptide-DNA virus-like nanoparticles

Comparison of protein expression during wild-type, and E1B-55k-deletion, adenovirus infection using quantitative time-course proteomics

Core labeling of adenovirus with EGFP.

De novo derivation of proteomes from transcriptomes for transcript and protein identification

Deep Sequencing of RNA from Blood and Oral Swab Samples Reveals the Presence of Nucleic Acid from a Number of Pathogens in Patients with Acute Ebola Virus Disease and Is Consistent with Bacterial Translocation across the Gut.

Deep splicing plasticity of the human adenovirus type 5 transcriptome drives virus evolution

Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity ⬇️

Elucidation of the Ebola virus VP24 cellular interactome and disruption of virus biology through targeted inhibition of host-cell protein function ⬇️

Factors affecting de novo RNA synthesis and back-priming by the respiratory syncytial virus polymerase

Frequent polymerase errors observed in a restricted area of clones derived from the attachment (G) protein gene of respiratory syncytial virus.

Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics.

Genotyping coronaviruses associated with feline infectious peritonitis.

High throughput discovery of protein variants using proteomics informed by transcriptomics.

High-throughput quantitative proteomic analysis of dengue virus type 2 infected A549 cells

Identification of Epstein-Barr Virus Replication Proteins in Burkitt's Lymphoma Cells

Identification of mutations contributing to the reduced virulence of a modified strain of respiratory syncytial virus

Impact of voluntary risk-mitigation behaviour on transmission of the Omicron SARS-CoV-2 variant in England

In vitro dynamic visualization analysis of fluorescently labeled minor capsid protein IX and core protein V by simultaneous detection

Investigating the Influence of Ribavirin on Human Respiratory Syncytial Virus RNA Synthesis by Using a High-Resolution Transcriptome Sequencing Approach ⬇️

Mitochondrial protein p32 can accumulate in the nucleus.

Nanopore ReCappable sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs

Neuropilin-1 is a host factor for SARS-CoV-2 infection

Nucleolar protein upstream binding factor is sequestered into adenovirus DNA replication centres during infection without affecting RNA polymerase I location or ablating rRNA synthesis

Nucleolar proteomics and viral infection

PITDB: a database of translated genomic elements.

Precursor of human adenovirus core polypeptide Mu targets the nucleolus and modulates the expression of E2 proteins

Proteomics analysis of the nucleolus in adenovirus-infected cells

Proteomics informed by transcriptomics for characterising active transposable elements and genome annotation in Aedes aegypti.

Proteomics informed by transcriptomics for characterising differential cellular susceptibility to Nelson Bay orthoreovirus infection

Proteomics informed by transcriptomics reveals Hendra virus sensitizes bat cells to TRAIL-mediated apoptosis

Proteomics technique opens new frontiers in mobilome research

Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells

Real-time, portable genome sequencing for Ebola surveillance

Relationship between adenovirus DNA replication proteins and nucleolar proteins B23.1 and B23.2.

Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2

Temporal and spatial analysis of the 2014-2015 Ebola virus outbreak in West Africa

The Herpesvirus Saimiri open reading frame 73 gene product interacts with the cellular protein p32.

The herpesvirus saimiri ORF73 gene product interacts with host-cell mitotic chromosomes and self-associates via its C terminus

The interactome of the human respiratory syncytial virus NS1 protein highlights multiple effects on host cell biology

The nucleotide sequences of intergenic regions between nine genes of pneumonia virus of mice establish the physical order of these genes in the viral genome

The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation

Transcriptomic signatures differentiate survival from fatal outcomes in humans infected with Ebola virus

Upstream-binding factor is sequestered into herpes simplex virus type 1 replication compartments

Using SILAC and quantitative proteomics to investigate the interactions between viral and host proteomes

Virus genomes reveal factors that spread and sustained the Ebola epidemic

What is new in the nucleolus?: workshop on the nucleolus: new perspectives

Zika Virus Infection Preferentially Counterbalances Human Peripheral Monocyte and/or NK Cell Activity.