Lista de obras - Robert M. Stupar - Dominio Público Uruguay

A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar

artículo científico publicado en 2013

A roadmap for functional structural variants in the soybean genome

artículo científico publicado en 2014

Allele-specific expression patterns reveal biases and embryo-specific parent-of-origin effects in hybrid maize

artículo científico publicado en 2007

An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype

artículo científico publicado en 2017

CRISPR/Cas mutagenesis of soybean and Medicago truncatula using a new web-tool and a modified Cas9 enzyme

artículo científico publicado en 2015

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula.

artículo científico publicado en 2017

Characterization of genetic heterogeneity within accessions in the USDA soybean germplasm collection

scientific article published on 01 March 2020

Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F1 hybrid

artículo científico publicado en 2006

Co-expression of soybean Dicer-like genes in response to stress and development

artículo científico publicado en 2012

Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats.

artículo científico publicado en 2001

Construction and comparison of three reference-quality genome assemblies for soybean

scientific article published on 28 October 2019

Dissecting the Genetic Basis of Local Adaptation in Soybean.

artículo científico publicado en 2017

Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans

artículo científico publicado en 2016

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

artículo científico publicado en 2017

Fluorescence in situ hybridization analysis reveals multiple loci of knob-associated DNA elements in one-knob and knobless maize lines

artículo científico publicado en 2004

Functional analysis and development of a CRISPR/Cas9 allelic series for a CPR5 ortholog necessary for proper growth of soybean trichomes

artículo científico publicado en 2019

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis

artículo científico publicado en 2008

Genetic Architecture of Soybean Yield and Agronomic Traits

article

Genome Editing in Soybean with CRISPR/Cas9

artículo científico publicado en 2019

Genome resilience and prevalence of segmental duplications following fast neutron irradiation of soybean.

artículo científico publicado en 2014

Genomic Heterogeneity and Structural Variation in Soybean Near Isogenic Lines ⬇️

artículo científico publicado el 24 de abril de 2013

Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants

scientific article published on 12 October 2019

Hybrid assembly with long and short reads improves discovery of gene family expansions

artículo científico publicado en 2017

Identical substitutions in magnesium chelatase paralogs result in chlorophyll-deficient soybean mutants

artículo científico publicado en 2014

Identification and characterization of a fast-neutron-induced mutant with elevated seed protein content in soybean

scientific article published on 19 July 2019

Integration, abundance, and transmission of mutations and transgenes in a series of CRISPR/Cas9 soybean lines

artículo científico publicado en 2020

Into the wild: The soybean genome meets its undomesticated relative.

artículo científico publicado en 2010

MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants

artículo científico publicado en 2015

Neo-Domestication of an Interspecific Tetraploid Helianthus annuus × Helianthus tuberous Population That Segregates for Perennial Habit

Nonadditive expression and parent-of-origin effects identified by microarray and allele-specific expression profiling of maize endosperm

artículo científico publicado en 2007

Perennial Grain and Oilseed Crops.

artículo científico publicado en 2016

Phenotypic and Genomic Analyses of a Fast Neutron Mutant Population Resource in Soybean ⬇️

artículo científico publicado el 14 de febrero de 2011

Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium)

scientific article published on 10 April 2009

Screening populations for copy number variation using genotyping-by-sequencing: a proof of concept using soybean fast neutron mutants

scientific article published on 06 August 2019

Soybean (Glycine max) Mutant and Germplasm Resources: Current Status and Future Prospects

scientific article published on 01 March 2016

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.

artículo científico

Structural Variants in the Soybean Genome Localize to Clusters of Biotic Stress-Response Genes ⬇️

artículo científico publicado el 13 de junio de 2012

Structural and functional divergence of a 1-Mb duplicated region in the soybean (Glycine max) genome and comparison to an orthologous region from Phaseolus vulgaris

artículo científico publicado en 2010

Structural diversity and differential transcription of the patatin multicopy gene family during potato tuber development.

artículo científico publicado en 2005

Targeted mutagenesis for functional analysis of gene duplication in legumes

artículo científico publicado en 2013

Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases

artículo científico publicado en 2011

The HECT ubiquitin-protein ligase (UPL) family in Arabidopsis: UPL3 has a specific role in trichome development.

artículo científico publicado en 2003

The Role of Deleterious Substitutions in Crop Genomes.

artículo científico publicado en 2016

The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82.

artículo científico publicado en 2010

The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plants.

artículo científico publicado en 2018

To the reference and beyond: understanding variation in plant genomes

artículo científico publicado en 2014

Transcriptome analysis of the barley-deoxynivalenol interaction: evidence for a role of glutathione in deoxynivalenol detoxification

artículo científico publicado en 2010

Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism

artículo científico publicado en 2017

Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation.

artículo científico publicado en 2017

Whole-genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad-based resistance to soybean cyst nematode

scientific article published on 20 February 2019

Lista de obras de Robert M. Stupar

A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar

A roadmap for functional structural variants in the soybean genome

Allele-specific expression patterns reveal biases and embryo-specific parent-of-origin effects in hybrid maize

An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype

CRISPR/Cas mutagenesis of soybean and Medicago truncatula using a new web-tool and a modified Cas9 enzyme

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula.

Characterization of genetic heterogeneity within accessions in the USDA soybean germplasm collection

Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F1 hybrid

Co-expression of soybean Dicer-like genes in response to stress and development

Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats.

Construction and comparison of three reference-quality genome assemblies for soybean

Dissecting the Genetic Basis of Local Adaptation in Soybean.

Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

Fluorescence in situ hybridization analysis reveals multiple loci of knob-associated DNA elements in one-knob and knobless maize lines

Functional analysis and development of a CRISPR/Cas9 allelic series for a CPR5 ortholog necessary for proper growth of soybean trichomes

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis

Genetic Architecture of Soybean Yield and Agronomic Traits

Genome Editing in Soybean with CRISPR/Cas9

Genome resilience and prevalence of segmental duplications following fast neutron irradiation of soybean.

Genomic Heterogeneity and Structural Variation in Soybean Near Isogenic Lines ⬇️

Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants

Hybrid assembly with long and short reads improves discovery of gene family expansions

Identical substitutions in magnesium chelatase paralogs result in chlorophyll-deficient soybean mutants

Identification and characterization of a fast-neutron-induced mutant with elevated seed protein content in soybean

Integration, abundance, and transmission of mutations and transgenes in a series of CRISPR/Cas9 soybean lines

Into the wild: The soybean genome meets its undomesticated relative.

MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants

Neo-Domestication of an Interspecific Tetraploid Helianthus annuus × Helianthus tuberous Population That Segregates for Perennial Habit

Nonadditive expression and parent-of-origin effects identified by microarray and allele-specific expression profiling of maize endosperm

Perennial Grain and Oilseed Crops.

Phenotypic and Genomic Analyses of a Fast Neutron Mutant Population Resource in Soybean ⬇️

Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium)

Screening populations for copy number variation using genotyping-by-sequencing: a proof of concept using soybean fast neutron mutants

Soybean (Glycine max) Mutant and Germplasm Resources: Current Status and Future Prospects

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.

Structural Variants in the Soybean Genome Localize to Clusters of Biotic Stress-Response Genes ⬇️

Structural and functional divergence of a 1-Mb duplicated region in the soybean (Glycine max) genome and comparison to an orthologous region from Phaseolus vulgaris

Structural diversity and differential transcription of the patatin multicopy gene family during potato tuber development.

Targeted mutagenesis for functional analysis of gene duplication in legumes

Targeted mutagenesis of duplicated genes in soybean with zinc-finger nucleases

The HECT ubiquitin-protein ligase (UPL) family in Arabidopsis: UPL3 has a specific role in trichome development.

The Role of Deleterious Substitutions in Crop Genomes.

The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82.

The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plants.

To the reference and beyond: understanding variation in plant genomes

Transcriptome analysis of the barley-deoxynivalenol interaction: evidence for a role of glutathione in deoxynivalenol detoxification

Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism

Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation.

Whole-genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad-based resistance to soybean cyst nematode