Lista de obras - Chojiro Kojima - Dominio Público Uruguay

(1)H, (15)N and (13)C resonance assignments of the conserved region in the middle domain of S. pombe Sin1 protein.

artículo científico publicado en 2014

14-3-3 proteins act as intracellular receptors for rice Hd3a florigen

artículo científico publicado en 2011

15N-15N J-coupling across Hg(II): direct observation of Hg(II)-mediated T-T base pairs in a DNA duplex

artículo científico publicado en 2007

1H, 13C and 15N NMR assignments of the Escherichia coli Orf135 protein

scientific article published on 07 May 2011

1H, 13C and 15N resonance assignments of the VAP-A: OSBP complex

artículo científico publicado en 2006

1H, 15N and 13C backbone and side-chain assignments of the rice phytochrome B PAS1 domain and backbone assignments of the PAS1-PAS2 domain.

artículo científico publicado en 2005

A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO

scientific journal article

Active repression of IFN regulatory factor-1-mediated transactivation by IFN regulatory factor-4.

artículo científico publicado en 2005

Amino Acid Selective 13C Labeling and 13C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance

artículo científico publicado en 2018

Amino acid residues involved in substrate recognition of the Escherichia coli Orf135 protein.

artículo científico publicado en 2005

Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice

scientific article published on 12 November 2014

Crystallographic characterization of the N-terminal domain of a plant NADPH oxidase.

artículo científico publicado en 2008

Current NMR Techniques for Structure-Based Drug Discovery.

artículo científico publicado en 2018

DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly 13C-labeled purine nucleotides

artículo científico publicado en 1998

Direct detection of the mercury-nitrogen bond in the thymine-Hg(II)-thymine base-pair with (199)Hg NMR spectroscopy

artículo científico publicado en 2015

Disassembling and bleaching of chloride-free pharaonis halorhodopsin by octyl-beta-glucoside

artículo científico publicado en 2005

Efficient protein production method for NMR using soluble protein tags with cold shock expression vector

artículo científico publicado en 2010

Electrostatic interaction between oxysterol-binding protein and VAMP-associated protein A revealed by NMR and mutagenesis studies

artículo científico publicado en 2010

Enzymatic Characterization of 5-Methylthioribose 1-Phosphate Isomerase fromBacillus subtilis

artículo científico publicado en 2007

Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis

artículo científico publicado en 2008

Exploring a DNA Sequence for the Three-Dimensional Structure Determination of a Silver(I)-Mediated C-C Base Pair in a DNA Duplex By (1)H NMR Spectroscopy.

artículo científico publicado en 2015

Filtering methods for selection of singlet and doublet signals in NMR spectra of DNA oligomers.

artículo científico publicado en 1994

Formation of a thymine-Hg(II)-thymine metal-mediated DNA base pair: proposal and theoretical calculation of the reaction pathway

artículo científico publicado en 2013

Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using (15)N NMR spectroscopy

artículo científico publicado en 2002

In-cell NMR as a sensitive tool to monitor physiological condition of Escherichia coli

artículo científico publicado en 2020

Induced structural changes in protein-DNA complexes.

artículo científico publicado en 1995

Insights into substrate recognition by the Escherichia coli Orf135 protein through its solution structure

scientific article published on 05 March 2012

Intermolecular contacts between the lambda-Cro repressor and the operator DNA characterized by nuclear magnetic resonance spectroscopy

artículo científico publicado en 1999

Latest approaches for efficient protein production in drug discovery

artículo científico publicado en 2014

Linker region of a halobacterial transducer protein interacts directly with its sensor retinal protein

artículo científico publicado en 2005

NMR spectroscopic analyses of functional nucleic acids-metal interaction and their solution structure analyses.

artículo científico

NMR spectroscopic investigations of the roles of the metal ion at A9/G10.1 site in hammerhead ribozymes

artículo científico publicado en 2003

NMR structural analysis of the G.G mismatch DNA complexed with naphthyridine-dimer

artículo científico publicado en 2005

NMR structural study of DNA oligomers containing alkylene crosslinked cyclic 2'-deoxyuridylate dimers

artículo científico publicado en 2008

NMR studies of DNA recognition mechanism of HMGB1 protein

artículo científico publicado en 2009

NMR studies of HAC1 mRNA

artículo científico publicado en 2009

Nature of the chemical bond formed with the structural metal ion at the A9/G10.1 motif derived from hammerhead ribozymes

artículo científico publicado en 2004

New sequential-assignment routes of nucleic acid NMR signals using a [5'-(13)C]-labeled DNA dodecamer

artículo científico publicado en 2004

Non-covalent forces tune the electron transfer complex between ferredoxin and sulfite reductase to optimize enzymatic activity ⬇️

artículo científico publicado en 2016

Nuclear magnetic resonance study of complexes between CRP and its 22- and 28-base-pair operators.

artículo científico

Paramagnetic NMR study of Cu(2+)-IDA complex localization on a protein surface and its application to elucidate long distance information

artículo científico publicado en 2004

Physicochemical nature of interfaces controlling ferredoxin NADP(+) reductase activity through its interprotein interactions with ferredoxin

artículo científico publicado en 2015

Precise analyses of DNA structure by NMR

scientific article published on 01 January 1993

Preparations of hammerhead ribozymes for investigations of their cleavable sequences

artículo científico publicado en 2009

Protein 19F-labeling using transglutaminase for the NMR study of intermolecular interactions.

artículo científico publicado en 2017

Purification, crystallization and preliminary X-ray crystallographic analysis of a rice Rac/Rop GTPase, OsRac1.

artículo científico publicado en 2013

Quantitative measurement of transverse and longitudinal cross-correlation between 13C-1H dipolar interaction and 13C chemical shift anisotropy: application to a 13C-labeled DNA duplex

artículo científico publicado en 1999

Regulation of rice NADPH oxidase by binding of Rac GTPase to its N-terminal extension

artículo científico publicado en 2007

Simple suppression of spurious peaks in TROSY experiments

artículo científico publicado en 2000

Site-specific isotope labeling of long RNA for structural and mechanistic studies.

artículo científico publicado en 2011

Slow motion in the CAA*TTG sequence of a DNA decamer duplex studied by NMR.

artículo científico publicado en 2001

Small-molecule ligand induces nucleotide flipping in (CAG)n trinucleotide repeats

artículo científico publicado en 2005

Solid-phase synthesis of selectively labeled DNA: applications for multidimensional nuclear magnetic resonance spectroscopy.

artículo científico publicado en 2001

Solution NMR structure and inhibitory effect against amyloid-β fibrillation of Humanin containing a d-isomerized serine residue

artículo científico publicado en 2016

Solution NMR study of DNA recognition mechanism of IRF4 protein

scientific article published on 01 January 2004

Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC)

artículo científico publicado en 1996

Solution structure of a small-molecular ligand complexed with CAG trinucleotide repeat DNA.

artículo científico publicado en 2005

Solution structure of the cytoplasmic region of Na+/H+ exchanger 1 complexed with essential cofactor calcineurin B homologous protein 1.

artículo científico publicado en 2006

Solution structure of the peptidoglycan binding domain of Bacillus subtilis cell wall lytic enzyme CwlC: characterization of the sporulation-related repeats by NMR.

artículo científico publicado en 2005

Spectroscopic analyses of DNA duplexes in the presence of mercury ions

scientific article published on 01 January 2005

Stereospecific assignment of H5' and H5″ in a (5'R)-/(5'S)-deuterium- labeled DNA decamer for(3) J (HH) determination and unambiguous NOE assignments

artículo científico publicado en 1998

Structural analyses on the mercuryII-mediated T-T base pair

scientific article published on 01 January 2006

Structural analysis of the phototactic transducer protein HtrII linker region from Natronomonas pharaonis

artículo científico publicado en 2007

Structural and physicochemical features on the metal-mediated base pairs

artículo científico publicado en 2007

Structural effect of complete [Rp]-phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex

artículo científico publicado en 1999

Structural feature of bent DNA recognized by HMGB1

artículo científico publicado en 2011

Structure Determination of an Ag(I) -Mediated Cytosine-Cytosine Base Pair within DNA Duplex in Solution with (1) H/(15) N/(109) Ag NMR Spectroscopy

artículo científico publicado en 2016

Structure analyses of DNA oligomers by use of heteronuclear 2D NMR ⬇️

artículo científico publicado el 1 de enero de 1991

Structure and function of florigen and the receptor complex.

artículo científico publicado en 2013

Structure model and physicochemical properties of the C-U mismatch pair in the double stranded RNA in solution.

artículo científico publicado en 1997

Structure of the N-terminal Regulatory Domain of a Plant NADPH Oxidase and Its Functional Implications

artículo científico publicado en 2010

Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B ⬇️

artículo científico publicado el 29 de octubre de 2003

Studies of DNA recognition mechanism of transcription factor IRF-4.

artículo científico publicado en 2006

Studies of physicochemical properties of N-H...N hydrogen bonds in DNA, using selective 15N-labeling and direct 15N 1D NMR

scientific article published on 01 November 2000

Sugar conformation of a stereospecific 2'-R or 2'-S deuterium-labeled DNA decamer studied with proton-proton J coupling constants

artículo científico publicado en 2001

Synthesis of 5-substituted [N3-15N]-pyrimidine nucleosides: Developing model systems for NMR studies of substituent effects on the N-H...N hydrogen bond in duplex DNA

artículo científico publicado en 2001

The crystal structure of the plant small GTPase OsRac1 reveals its mode of binding to NADPH oxidase.

artículo científico publicado en 2014

The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation

artículo científico publicado en 2014

Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies

artículo científico publicado en 2012

Utilization of paramagnetic relaxation enhancements for high-resolution NMR structure determination of a soluble loop-rich protein with sparse NOE distance restraints

artículo científico publicado en 2015

[Regulation mechanism of Na+/H+ exchanger]

artículo científico publicado en 2008

[Structure and function of membrane, rafts, and their associated proteins]

scientific article published on 01 October 2001

pCold-GST vector: a novel cold-shock vector containing GST tag for soluble protein production

artículo científico publicado en 2008

Lista de obras de Chojiro Kojima

(1)H, (15)N and (13)C resonance assignments of the conserved region in the middle domain of S. pombe Sin1 protein.

14-3-3 proteins act as intracellular receptors for rice Hd3a florigen

15N-15N J-coupling across Hg(II): direct observation of Hg(II)-mediated T-T base pairs in a DNA duplex

1H, 13C and 15N NMR assignments of the Escherichia coli Orf135 protein

1H, 13C and 15N resonance assignments of the VAP-A: OSBP complex

1H, 15N and 13C backbone and side-chain assignments of the rice phytochrome B PAS1 domain and backbone assignments of the PAS1-PAS2 domain.

A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO

Active repression of IFN regulatory factor-1-mediated transactivation by IFN regulatory factor-4.

Amino Acid Selective 13C Labeling and 13C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance

Amino acid residues involved in substrate recognition of the Escherichia coli Orf135 protein.

Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice

Crystallographic characterization of the N-terminal domain of a plant NADPH oxidase.

Current NMR Techniques for Structure-Based Drug Discovery.

DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly 13C-labeled purine nucleotides

Direct detection of the mercury-nitrogen bond in the thymine-Hg(II)-thymine base-pair with (199)Hg NMR spectroscopy

Disassembling and bleaching of chloride-free pharaonis halorhodopsin by octyl-beta-glucoside

Efficient protein production method for NMR using soluble protein tags with cold shock expression vector

Electrostatic interaction between oxysterol-binding protein and VAMP-associated protein A revealed by NMR and mutagenesis studies

Enzymatic Characterization of 5-Methylthioribose 1-Phosphate Isomerase fromBacillus subtilis

Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis

Exploring a DNA Sequence for the Three-Dimensional Structure Determination of a Silver(I)-Mediated C-C Base Pair in a DNA Duplex By (1)H NMR Spectroscopy.

Filtering methods for selection of singlet and doublet signals in NMR spectra of DNA oligomers.

Formation of a thymine-Hg(II)-thymine metal-mediated DNA base pair: proposal and theoretical calculation of the reaction pathway

Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using (15)N NMR spectroscopy

In-cell NMR as a sensitive tool to monitor physiological condition of Escherichia coli

Induced structural changes in protein-DNA complexes.

Insights into substrate recognition by the Escherichia coli Orf135 protein through its solution structure

Intermolecular contacts between the lambda-Cro repressor and the operator DNA characterized by nuclear magnetic resonance spectroscopy

Latest approaches for efficient protein production in drug discovery

Linker region of a halobacterial transducer protein interacts directly with its sensor retinal protein

NMR spectroscopic analyses of functional nucleic acids-metal interaction and their solution structure analyses.

NMR spectroscopic investigations of the roles of the metal ion at A9/G10.1 site in hammerhead ribozymes

NMR structural analysis of the G.G mismatch DNA complexed with naphthyridine-dimer

NMR structural study of DNA oligomers containing alkylene crosslinked cyclic 2'-deoxyuridylate dimers

NMR studies of DNA recognition mechanism of HMGB1 protein

NMR studies of HAC1 mRNA

Nature of the chemical bond formed with the structural metal ion at the A9/G10.1 motif derived from hammerhead ribozymes

New sequential-assignment routes of nucleic acid NMR signals using a [5'-(13)C]-labeled DNA dodecamer

Non-covalent forces tune the electron transfer complex between ferredoxin and sulfite reductase to optimize enzymatic activity ⬇️

Nuclear magnetic resonance study of complexes between CRP and its 22- and 28-base-pair operators.

Paramagnetic NMR study of Cu(2+)-IDA complex localization on a protein surface and its application to elucidate long distance information

Physicochemical nature of interfaces controlling ferredoxin NADP(+) reductase activity through its interprotein interactions with ferredoxin

Precise analyses of DNA structure by NMR

Preparations of hammerhead ribozymes for investigations of their cleavable sequences

Protein 19F-labeling using transglutaminase for the NMR study of intermolecular interactions.

Purification, crystallization and preliminary X-ray crystallographic analysis of a rice Rac/Rop GTPase, OsRac1.

Quantitative measurement of transverse and longitudinal cross-correlation between 13C-1H dipolar interaction and 13C chemical shift anisotropy: application to a 13C-labeled DNA duplex

Regulation of rice NADPH oxidase by binding of Rac GTPase to its N-terminal extension

Simple suppression of spurious peaks in TROSY experiments

Site-specific isotope labeling of long RNA for structural and mechanistic studies.

Slow motion in the CAA*TTG sequence of a DNA decamer duplex studied by NMR.

Small-molecule ligand induces nucleotide flipping in (CAG)n trinucleotide repeats

Solid-phase synthesis of selectively labeled DNA: applications for multidimensional nuclear magnetic resonance spectroscopy.

Solution NMR structure and inhibitory effect against amyloid-β fibrillation of Humanin containing a d-isomerized serine residue

Solution NMR study of DNA recognition mechanism of IRF4 protein

Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC)

Solution structure of a small-molecular ligand complexed with CAG trinucleotide repeat DNA.

Solution structure of the cytoplasmic region of Na+/H+ exchanger 1 complexed with essential cofactor calcineurin B homologous protein 1.

Solution structure of the peptidoglycan binding domain of Bacillus subtilis cell wall lytic enzyme CwlC: characterization of the sporulation-related repeats by NMR.

Spectroscopic analyses of DNA duplexes in the presence of mercury ions

Stereospecific assignment of H5' and H5″ in a (5'R)-/(5'S)-deuterium- labeled DNA decamer for(3) J (HH) determination and unambiguous NOE assignments

Structural analyses on the mercuryII-mediated T-T base pair

Structural analysis of the phototactic transducer protein HtrII linker region from Natronomonas pharaonis

Structural and physicochemical features on the metal-mediated base pairs

Structural effect of complete [Rp]-phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex

Structural feature of bent DNA recognized by HMGB1

Structure Determination of an Ag(I) -Mediated Cytosine-Cytosine Base Pair within DNA Duplex in Solution with (1) H/(15) N/(109) Ag NMR Spectroscopy

Structure analyses of DNA oligomers by use of heteronuclear 2D NMR ⬇️

Structure and function of florigen and the receptor complex.

Structure model and physicochemical properties of the C-U mismatch pair in the double stranded RNA in solution.

Structure of the N-terminal Regulatory Domain of a Plant NADPH Oxidase and Its Functional Implications

Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B ⬇️

Studies of DNA recognition mechanism of transcription factor IRF-4.

Studies of physicochemical properties of N-H...N hydrogen bonds in DNA, using selective 15N-labeling and direct 15N 1D NMR

Sugar conformation of a stereospecific 2'-R or 2'-S deuterium-labeled DNA decamer studied with proton-proton J coupling constants

Synthesis of 5-substituted [N3-15N]-pyrimidine nucleosides: Developing model systems for NMR studies of substituent effects on the N-H...N hydrogen bond in duplex DNA

The crystal structure of the plant small GTPase OsRac1 reveals its mode of binding to NADPH oxidase.

The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation

Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies