Lista de obras - Matthew Wakefield - Dominio Público Uruguay

A second-generation anchored genetic linkage map of the tammar wallaby (Macropus eugenii).

artículo científico publicado en 2011

Age-dependent transcriptome and proteome following transection of neonatal spinal cord of Monodelphis domestica (South American grey short-tailed opossum)

artículo científico publicado en 2014

AmpliVar: mutation detection in high-throughput sequence from amplicon-based libraries.

artículo científico publicado en 2015

Assignment of BReast Cancer Associated 1 (BRCA1) to tammar wallaby (Macropus eugenii) chromosome 2q3 by in situ hybridization

scientific article published on 01 January 2006

CX-5461 activates the DNA damage response and demonstrates therapeutic efficacy in high-grade serous ovarian cancer

scientific article published on 26 May 2020

ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity

artículo científico publicado en 2011

Characterization of a <i>RAD51C</i>-silenced high-grade serous ovarian cancer model during development of PARP inhibitor resistance

artículo científico publicado en 2021

Comparative maps of vertebrates

artículo científico publicado en 1996

Cone visual pigments of monotremes: filling the phylogenetic gap.

artículo científico publicado en 2008

Cone visual pigments of the Australian marsupials, the stripe-faced and fat-tailed dunnarts: sequence and inferred spectral properties.

artículo científico publicado en 2004

Control of bacterial virulence by the RalR regulator of the rabbit-specific enteropathogenic Escherichia coli strain E22.

artículo científico publicado en 2013

Correction: Mechanisms That Determine the Internal Environment of the Developing Brain: A Transcriptomic, Functional and Ultrastructural Approach

artículo científico publicado en 2016

DMRT gene cluster analysis in the platypus: New insights into genomic organization and regulatory regions

artículo científico publicado en 2006

DNA repair processes are critical mediators of p53-dependent tumor suppression

artículo científico publicado en 2018

Diverse mechanisms of PARP inhibitor resistance in ovarian cancer

artículo científico publicado en 2019

Evolutionary adaptation of an AraC-like regulatory protein in Citrobacter rodentium and Escherichia species

artículo científico publicado en 2015

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

artículo científico publicado en 2007

FokI-dCas9 mediates high-fidelity genome editing in pigs

scientific article published on 12 August 2019

Gene ontology analysis for RNA-seq: accounting for selection bias

artículo científico publicado en 2010

Genome analysis of the platypus reveals unique signatures of evolution

artículo científico publicado en 2008

Genome analysis of the platypus reveals unique signatures of evolution

artículo científico publicado en 2008

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

artículo científico publicado en 2007

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

article

Genome-wide analysis of the Pho regulon in a pstCA mutant of Citrobacter rodentium

artículo científico publicado en 2012

Genomics--from Neanderthals to high-throughput sequencing

artículo científico publicado en 2006

Histone underacetylation is an ancient component of mammalian X chromosome inactivation ⬇️

artículo científico publicado el 2 de septiembre de 1997

Influx mechanisms in the embryonic and adult rat choroid plexus: a transcriptome study

artículo científico publicado en 2015

Involvement of PatE, a prophage-encoded AraC-like regulator, in the transcriptional activation of acid resistance pathways of enterohemorrhagic Escherichia coli strain EDL933.

artículo científico publicado en 2012

Isolation and characterization of 10 MHC Class I-associated microsatellite loci in tammar wallaby (Macropus eugenii)

artículo científico publicado en 2009

Isolation, X location and activity of the marsupial homologue of SLC16A2, an XIST-flanking gene in eutherian mammals

artículo científico publicado en 2005

Marsupials and monotremes sort genome treasures from junk

artículo científico publicado en 2005

MaveDB v2: a curated community database with over three million variant effects from multiplexed functional assays

Mechanisms that determine the internal environment of the developing brain: a transcriptomic, functional and ultrastructural approach.

artículo científico publicado en 2013

Methylation of all BRCA1 copies predicts response to the PARP inhibitor rucaparib in ovarian carcinoma

artículo científico publicado en 2018

Molecular correlates of platinum response in human high-grade serous ovarian cancer patient-derived xenografts

artículo científico publicado en 2014

Oocytes can efficiently repair DNA double-strand breaks to restore genetic integrity and protect offspring health

artículo científico publicado en 2020

Physical map of two tammar wallaby chromosomes: a strategy for mapping in non-model mammals.

artículo científico publicado en 2008

Preclinical small molecule WEHI-7326 overcomes drug resistance and elicits response in patient-derived xenograft models of human treatment-refractory tumors

artículo científico publicado en 2021

Primary mucinous ovarian neoplasms rarely exhibit a germ cell histogenesis

artículo científico publicado en 2020

PyCogent: a toolkit for making sense from sequence

artículo científico publicado en 2007

PyEvolve: a toolkit for statistical modelling of molecular evolution

artículo científico publicado en 2004

RNA-seq of Isolated Chromaffin Cells Highlights the Role of Sex-Linked and Imprinted Genes in Adrenal Medulla Development

scientific article published on 08 March 2019

Rates of genome evolution and branching order from whole genome analysis

scientific article published on 09 May 2007

Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex

artículo científico publicado en 2006

RegA, an AraC-like protein, is a global transcriptional regulator that controls virulence gene expression in Citrobacter rodentium

artículo científico publicado en 2008

RegR virulence regulon of rabbit-specific enteropathogenic Escherichia coli strain E22

artículo científico publicado en 2013

Secondary Somatic Mutations Restoring RAD51C and RAD51D Associated with Acquired Resistance to the PARP Inhibitor Rucaparib in High-Grade Ovarian Carcinoma

artículo científico publicado en 2017

Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation

artículo científico publicado en 2013

SurvivalVolume: interactive volume threshold survival graphs

artículo científico publicado en 2016

Targeting DNA repair: the genome as a potential biomarker.

artículo científico publicado en 2017

The cone visual pigments of an Australian marsupial, the tammar wallaby (Macropus eugenii): sequence, spectral tuning, and evolution

artículo científico publicado en 2003

The molecular origin and taxonomy of mucinous ovarian carcinoma

scientific article published on 02 September 2019

The region homologous to the X-chromosome inactivation centre has been disrupted in marsupial and monotreme mammals

artículo científico publicado en 2007

Therapeutic options for mucinous ovarian carcinoma

scientific article published on 02 January 2020

Towards an understanding of the genetic basis behind 1080 (sodium fluoroacetate) tolerance and an investigation of the candidate gene ACO2

article

Transcript length bias in RNA-seq data confounds systems biology

artículo científico publicado en 2009

Two of a kind: transmissible Schwann cell cancers in the endangered Tasmanian devil (Sarcophilus harrisii)

scientific article published on 02 August 2019

Vestige: maximum likelihood phylogenetic footprinting

artículo científico publicado en 2005

Xenomapper: Mapping reads in a mixed species context

artículo científico publicado en 2016

Y chromosome microsatellite markers identified from the tammar wallaby (Macropus eugenii) and their amplification in three other macropod species

article

Lista de obras de Matthew Wakefield

A second-generation anchored genetic linkage map of the tammar wallaby (Macropus eugenii).

Age-dependent transcriptome and proteome following transection of neonatal spinal cord of Monodelphis domestica (South American grey short-tailed opossum)

AmpliVar: mutation detection in high-throughput sequence from amplicon-based libraries.

Assignment of BReast Cancer Associated 1 (BRCA1) to tammar wallaby (Macropus eugenii) chromosome 2q3 by in situ hybridization

CX-5461 activates the DNA damage response and demonstrates therapeutic efficacy in high-grade serous ovarian cancer

ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity

Characterization of a <i>RAD51C</i>-silenced high-grade serous ovarian cancer model during development of PARP inhibitor resistance

Comparative maps of vertebrates

Cone visual pigments of monotremes: filling the phylogenetic gap.

Cone visual pigments of the Australian marsupials, the stripe-faced and fat-tailed dunnarts: sequence and inferred spectral properties.

Control of bacterial virulence by the RalR regulator of the rabbit-specific enteropathogenic Escherichia coli strain E22.

Correction: Mechanisms That Determine the Internal Environment of the Developing Brain: A Transcriptomic, Functional and Ultrastructural Approach

DMRT gene cluster analysis in the platypus: New insights into genomic organization and regulatory regions

DNA repair processes are critical mediators of p53-dependent tumor suppression

Diverse mechanisms of PARP inhibitor resistance in ovarian cancer

Evolutionary adaptation of an AraC-like regulatory protein in Citrobacter rodentium and Escherichia species

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

FokI-dCas9 mediates high-fidelity genome editing in pigs

Gene ontology analysis for RNA-seq: accounting for selection bias

Genome analysis of the platypus reveals unique signatures of evolution

Genome analysis of the platypus reveals unique signatures of evolution

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

Genome-wide analysis of the Pho regulon in a pstCA mutant of Citrobacter rodentium

Genomics--from Neanderthals to high-throughput sequencing

Histone underacetylation is an ancient component of mammalian X chromosome inactivation ⬇️

Influx mechanisms in the embryonic and adult rat choroid plexus: a transcriptome study

Involvement of PatE, a prophage-encoded AraC-like regulator, in the transcriptional activation of acid resistance pathways of enterohemorrhagic Escherichia coli strain EDL933.

Isolation and characterization of 10 MHC Class I-associated microsatellite loci in tammar wallaby (Macropus eugenii)

Isolation, X location and activity of the marsupial homologue of SLC16A2, an XIST-flanking gene in eutherian mammals

Marsupials and monotremes sort genome treasures from junk

MaveDB v2: a curated community database with over three million variant effects from multiplexed functional assays

Mechanisms that determine the internal environment of the developing brain: a transcriptomic, functional and ultrastructural approach.

Methylation of all BRCA1 copies predicts response to the PARP inhibitor rucaparib in ovarian carcinoma

Molecular correlates of platinum response in human high-grade serous ovarian cancer patient-derived xenografts

Oocytes can efficiently repair DNA double-strand breaks to restore genetic integrity and protect offspring health

Physical map of two tammar wallaby chromosomes: a strategy for mapping in non-model mammals.

Preclinical small molecule WEHI-7326 overcomes drug resistance and elicits response in patient-derived xenograft models of human treatment-refractory tumors

Primary mucinous ovarian neoplasms rarely exhibit a germ cell histogenesis

PyCogent: a toolkit for making sense from sequence

PyEvolve: a toolkit for statistical modelling of molecular evolution

RNA-seq of Isolated Chromaffin Cells Highlights the Role of Sex-Linked and Imprinted Genes in Adrenal Medulla Development

Rates of genome evolution and branching order from whole genome analysis

Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex

RegA, an AraC-like protein, is a global transcriptional regulator that controls virulence gene expression in Citrobacter rodentium

RegR virulence regulon of rabbit-specific enteropathogenic Escherichia coli strain E22

Secondary Somatic Mutations Restoring RAD51C and RAD51D Associated with Acquired Resistance to the PARP Inhibitor Rucaparib in High-Grade Ovarian Carcinoma

Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation

SurvivalVolume: interactive volume threshold survival graphs

Targeting DNA repair: the genome as a potential biomarker.

The cone visual pigments of an Australian marsupial, the tammar wallaby (Macropus eugenii): sequence, spectral tuning, and evolution

The molecular origin and taxonomy of mucinous ovarian carcinoma

The region homologous to the X-chromosome inactivation centre has been disrupted in marsupial and monotreme mammals

Therapeutic options for mucinous ovarian carcinoma

Towards an understanding of the genetic basis behind 1080 (sodium fluoroacetate) tolerance and an investigation of the candidate gene ACO2

Transcript length bias in RNA-seq data confounds systems biology

Two of a kind: transmissible Schwann cell cancers in the endangered Tasmanian devil (Sarcophilus harrisii)

Vestige: maximum likelihood phylogenetic footprinting

Xenomapper: Mapping reads in a mixed species context

Y chromosome microsatellite markers identified from the tammar wallaby (Macropus eugenii) and their amplification in three other macropod species