Lista de obras - Jill Wegrzyn - Dominio Público Uruguay

A genome sequence for the threatened whitebark pine

artículo científico publicado en 2024

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

article

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

artículo científico publicado en 2017

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).

artículo científico publicado en 2016

Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L.

artículo científico publicado en 2011

Association genetics of chemical wood properties in black poplar (Populus nigra).

artículo científico publicado en 2012

Association genetics of coastal Douglas fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-hardiness related traits

artículo científico publicado en 2009

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

artículo científico publicado en 2013

Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome

artículo científico publicado en 2011

Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem

artículo científico publicado en 2010

Association mapping of quantitative disease resistance in a natural population of loblolly pine (Pinus taeda L.).

artículo científico publicado en 2010

Association of loblolly pine xylem development gene expression with single-nucleotide polymorphisms.

artículo científico publicado en 2013

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae).

artículo científico publicado en 2010

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites

artículo científico publicado en 2008

CartograTree: connecting tree genomes, phenotypes and environment

artículo científico

ChloroMitoCU: Codon patterns across organelle genomes for functional genomics and evolutionary applications

artículo científico publicado en 2017

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

artículo científico publicado en 2015

Comparative Transcriptomics Among Four White Pine Species

artículo científico publicado en 2018

Comparative analysis of differential gene expression indicates divergence in ontogenetic strategies of leaves in two conifer genera

artículo científico publicado en 2022

Comparative genomics of six Juglans species reveals disease-associated gene family contractions

artículo científico publicado en 2019

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

artículo científico publicado en 2012

Cyberinfrastructure and resources to enable an integrative approach to studying forest trees

artículo científico publicado en 2019

Cysteine Cathepsins in the secretory vesicle produce active peptides: Cathepsin L generates peptide neurotransmitters and cathepsin B produces beta-amyloid of Alzheimer's disease

artículo científico publicado en 2011

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

artículo científico publicado en 2014

Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

article

Demonstration of GTG as an alternative initiation codon for the serpin endopin 2B-2.

artículo científico publicado en 2005

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

artículo científico publicado en 2011

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

artículo científico publicado en 2014

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies)

artículo científico publicado en 2012

EnTAP: Bringing faster and smarter functional annotation to non-model eukaryotic transcriptomes

artículo científico publicado en 2019

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

artículo científico publicado en 2017

Extensive Variation in Drought-Induced Gene Expression Changes Between Loblolly Pine Genotypes

artículo científico publicado en 2021

Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource.

artículo científico publicado en 2013

Green plant genomes: What we know in an era of rapidly expanding opportunities

artículo científico publicado en 2022

Insights into the loblolly pine genome: characterization of BAC and fosmid sequences

artículo científico publicado en 2013

JAK/STAT3 regulated global gene expression dynamics during late-stage reprogramming process

artículo científico publicado en 2018

Lineage, fate, and fate potential of NG2-glia.

artículo científico publicado en 2015

Multilocus analyses reveal little evidence for lineage-wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus).

artículo científico publicado en 2013

Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).

artículo científico publicado en 2009

NLR diversity and candidate fusiform rust resistance genes in loblolly pine

artículo científico publicado en 2021

Neuropeptidomic components generated by proteomic functions in secretory vesicles for cell-cell communication

artículo científico publicado en 2010

New extension software modules to enhance searching and display of transcriptome data in Tripal databases

artículo científico publicado en 2017

Open access to tree genomes: the path to a better forest

artículo científico publicado en 2013

Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae).

artículo científico publicado en 2010

PineSAP--sequence alignment and SNP identification pipeline

artículo científico publicado en 2009

Poor maternal nutrition during gestation alters the expression of genes involved in muscle development and metabolism in lambs.

artículo científico publicado en 2016

Proteases for processing proneuropeptides into peptide neurotransmitters and hormones

artículo científico publicado en 2008

Proteomics of dense core secretory vesicles reveal distinct protein categories for secretion of neuroeffectors for cell-cell communication

artículo científico publicado en 2010

Proteomics of neuroendocrine secretory vesicles reveal distinct functional systems for biosynthesis and exocytosis of peptide hormones and neurotransmitters

artículo científico publicado en 2007

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine

artículo científico publicado en 2016

SNP markers trace familial linkages in a cloned population of Pinus taeda—prospects for genomic selection

article published in 2012

Sequence of the Sugar Pine Megagenome

artículo científico publicado en 2016

Sequencing and assembly of the 22-gb loblolly pine genome

artículo científico publicado en 2014

Standards recommendations for the Earth BioGenome Project

artículo científico publicado en 2022

Strategies of tolerance reflected in two North American maple genomes

artículo científico publicado en 2021

Targeted Capture Sequencing in Whitebark Pine Reveals Range-Wide Demographic and Adaptive Patterns Despite Challenges of a Large, Repetitive Genome

artículo científico publicado en 2016

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

artículo científico publicado en 2017

The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

artículo científico publicado en 2010

The evolutionary genetics of the genes underlying phenotypic associations for loblolly pine (Pinus taeda, Pinaceae)

artículo científico publicado en 2013

The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases

artículo científico publicado en 2012

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols

artículo científico publicado en 2016

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.

artículo científico publicado en 2017

Transcriptome Analysis Reveals Differential Gene Expression and a Possible Role of Gibberellins in a Shade-Tolerant Mutant of Perennial Ryegrass

artículo científico publicado en 2017

Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife.

artículo científico publicado en 2016

TreeGenes: A forest tree genome database

artículo científico publicado en 2008

Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

artículo científico publicado en 2014

Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA.

artículo científico publicado en 2017

YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut

artículo científico publicado en 2015

Lista de obras de Jill Wegrzyn

A genome sequence for the threatened whitebark pine

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).

Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L.

Association genetics of chemical wood properties in black poplar (Populus nigra).

Association genetics of coastal Douglas fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-hardiness related traits

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome

Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem

Association mapping of quantitative disease resistance in a natural population of loblolly pine (Pinus taeda L.).

Association of loblolly pine xylem development gene expression with single-nucleotide polymorphisms.

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae).

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites

CartograTree: connecting tree genomes, phenotypes and environment

ChloroMitoCU: Codon patterns across organelle genomes for functional genomics and evolutionary applications

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

Comparative Transcriptomics Among Four White Pine Species

Comparative analysis of differential gene expression indicates divergence in ontogenetic strategies of leaves in two conifer genera

Comparative genomics of six Juglans species reveals disease-associated gene family contractions

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

Cyberinfrastructure and resources to enable an integrative approach to studying forest trees

Cysteine Cathepsins in the secretory vesicle produce active peptides: Cathepsin L generates peptide neurotransmitters and cathepsin B produces beta-amyloid of Alzheimer's disease

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

Demonstration of GTG as an alternative initiation codon for the serpin endopin 2B-2.

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies)

EnTAP: Bringing faster and smarter functional annotation to non-model eukaryotic transcriptomes

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Extensive Variation in Drought-Induced Gene Expression Changes Between Loblolly Pine Genotypes

Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource.

Green plant genomes: What we know in an era of rapidly expanding opportunities

Insights into the loblolly pine genome: characterization of BAC and fosmid sequences

JAK/STAT3 regulated global gene expression dynamics during late-stage reprogramming process

Lineage, fate, and fate potential of NG2-glia.

Multilocus analyses reveal little evidence for lineage-wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus).

Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).

NLR diversity and candidate fusiform rust resistance genes in loblolly pine

Neuropeptidomic components generated by proteomic functions in secretory vesicles for cell-cell communication

New extension software modules to enhance searching and display of transcriptome data in Tripal databases

Open access to tree genomes: the path to a better forest

Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae).

PineSAP--sequence alignment and SNP identification pipeline

Poor maternal nutrition during gestation alters the expression of genes involved in muscle development and metabolism in lambs.

Proteases for processing proneuropeptides into peptide neurotransmitters and hormones

Proteomics of dense core secretory vesicles reveal distinct protein categories for secretion of neuroeffectors for cell-cell communication

Proteomics of neuroendocrine secretory vesicles reveal distinct functional systems for biosynthesis and exocytosis of peptide hormones and neurotransmitters

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine

SNP markers trace familial linkages in a cloned population of Pinus taeda—prospects for genomic selection

Sequence of the Sugar Pine Megagenome

Sequencing and assembly of the 22-gb loblolly pine genome

Standards recommendations for the Earth BioGenome Project

Strategies of tolerance reflected in two North American maple genomes

Targeted Capture Sequencing in Whitebark Pine Reveals Range-Wide Demographic and Adaptive Patterns Despite Challenges of a Large, Repetitive Genome

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

The evolutionary genetics of the genes underlying phenotypic associations for loblolly pine (Pinus taeda, Pinaceae)

The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.

Transcriptome Analysis Reveals Differential Gene Expression and a Possible Role of Gibberellins in a Shade-Tolerant Mutant of Perennial Ryegrass

Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife.

TreeGenes: A forest tree genome database

Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA.

YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut