Lista de obras - Mark Holder - Dominio Público Uruguay

A dirichlet process prior for estimating lineage-specific substitution rates

artículo científico publicado en 2012

A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics

artículo científico publicado en 2008

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

artículo científico publicado en 2017

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

scholarly article published 18 October 2016

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

An Algorithm for Calculating the Probability of Classes of Data Patterns on a Genealogy

artículo científico publicado en 2012

BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics

artículo científico publicado en 2011

DendroPy: a Python library for phylogenetic computing

artículo científico publicado en 2010

Difficulties in Detecting Hybridization

artículo científico publicado en 2001

Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts.

artículo científico publicado en 2011

Estimating trees from filtered data: identifiability of models for morphological phylogenetics

artículo científico publicado en 2009

Evaluating the robustness of phylogenetic methods to among-site variability in substitution processes

artículo científico publicado en 2008

Evidence for climate-driven diversification? A caution for interpreting ABC inferences of simultaneous historical events

artículo científico publicado en 2012

Explaining species distribution patterns through hierarchical modeling

article

Ginkgo: spatially-explicit simulator of complex phylogeographic histories

artículo científico publicado en 2010

Model parameterization, prior distributions, and the general time-reversible model in Bayesian phylogenetics

artículo científico publicado en 2004

NeXML: rich, extensible, and verifiable representation of comparative data and metadata

artículo científico publicado en 2012

Phycas: software for Bayesian phylogenetic analysis

artículo científico publicado en 2015

Phylesystem: a git-based data store for community curated phylogenetic estimates

article

Phylesystem: a git-based data store for community-curated phylogenetic estimates

artículo científico publicado en 2015

Phylogenetic assessment of filoviruses: how many lineages ofMarburg virus? ⬇️

artículo científico publicado el 1 de julio de 2012

Phylogeny estimation: traditional and Bayesian approaches

artículo científico publicado en 2003

Polytomies and Bayesian phylogenetic inference

artículo científico publicado en 2005

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

artículo científico publicado en 2011

SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees

artículo científico publicado en 2011

Speeding up iterative applications of the Build supertree algorithm

The Posterior and the Prior in Bayesian Phylogenetics

scholarly article by Michael E. Alfaro & Mark Holder published December 2006 in Annual Review of Ecology, Evolution, and Systematics

The akaike information criterion will not choose the no common mechanism model

artículo científico publicado en 2010

The big questions for biodiversity informatics

article

The interface of protein structure, protein biophysics, and molecular evolution

artículo científico publicado en 2012

The phylogenetic position of Myxozoa: exploring conflicting signals in phylogenomic and ribosomal data sets

artículo científico publicado en 2010

Two living species of coelacanths?

artículo científico publicado en 1999

What's in a likelihood? Simple models of protein evolution and the contribution of structurally viable reconstructions to the likelihood

artículo científico publicado en 2011

Lista de obras de Mark Holder

A dirichlet process prior for estimating lineage-specific substitution rates

A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species

An Algorithm for Calculating the Probability of Classes of Data Patterns on a Genealogy

BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics

DendroPy: a Python library for phylogenetic computing

Difficulties in Detecting Hybridization

Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts.

Estimating trees from filtered data: identifiability of models for morphological phylogenetics

Evaluating the robustness of phylogenetic methods to among-site variability in substitution processes

Evidence for climate-driven diversification? A caution for interpreting ABC inferences of simultaneous historical events

Explaining species distribution patterns through hierarchical modeling

Ginkgo: spatially-explicit simulator of complex phylogeographic histories

Model parameterization, prior distributions, and the general time-reversible model in Bayesian phylogenetics

NeXML: rich, extensible, and verifiable representation of comparative data and metadata

Phycas: software for Bayesian phylogenetic analysis

Phylesystem: a git-based data store for community curated phylogenetic estimates

Phylesystem: a git-based data store for community-curated phylogenetic estimates

Phylogenetic assessment of filoviruses: how many lineages ofMarburg virus? ⬇️

Phylogeny estimation: traditional and Bayesian approaches

Polytomies and Bayesian phylogenetic inference

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees

Speeding up iterative applications of the Build supertree algorithm

The Posterior and the Prior in Bayesian Phylogenetics

The akaike information criterion will not choose the no common mechanism model

The big questions for biodiversity informatics

The interface of protein structure, protein biophysics, and molecular evolution

The phylogenetic position of Myxozoa: exploring conflicting signals in phylogenomic and ribosomal data sets

Two living species of coelacanths?

What's in a likelihood? Simple models of protein evolution and the contribution of structurally viable reconstructions to the likelihood