Lista de obras - Frank Bergmann - Dominio Público Uruguay

15-lipoxygenase-1 production is lost in pancreatic cancer and overexpression of the gene inhibits tumor cell growth

artículo científico publicado en 2007

A Portable Structural Analysis Library for Reaction Networks

A Profile of Today's SBML-Compatible Software

scholarly article published December 2011

A novel animal model of severe pancreatitis in mice and its differences to the rat.

artículo científico publicado en 2008

Acinar cell carcinoma of the pancreas: is resection justified even in limited metastatic disease?

artículo científico publicado en 2011

Anaplastic pancreatic cancer: Presentation, surgical management, and outcome

artículo científico publicado en 2010

Antimony: a modular model definition language

artículo científico publicado en 2009

Autoimmune pancreatocholangitis, non-autoimmune pancreatitis and primary sclerosing cholangitis: a comparative morphological and immunological analysis

artículo científico publicado en 2008

Bifurcation discovery tool

artículo científico publicado en 2005

COMBINE Archive Specification Version 1.

artículo científico publicado en 2015

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project

artículo científico publicado en 2014

CXCL14 expression and potential function in pancreatic cancer

artículo científico publicado en 2007

Cannabinoids in pancreatic cancer: correlation with survival and pain

artículo científico publicado en 2008

Cannabinoids reduce markers of inflammation and fibrosis in pancreatic stellate cells

artículo científico publicado en 2008

Clinical significance and regulation of the costimulatory molecule B7-H1 in pancreatic cancer

artículo científico publicado en 2008

Clinicopathologic characteristics of patients with resected multifocal intraductal papillary mucinous neoplasm of the pancreas

artículo científico publicado en 2012

Comparing simulation results of SBML capable simulators

artículo científico publicado en 2008

Computational Tools for Modeling Protein Networks

Enucleation: A treatment alternative for branch duct intraductal papillary mucinous neoplasms

artículo científico publicado en 2016

EnzymeML: seamless data flow and modeling of enzymatic data

artículo científico publicado en 2023

Identification of a tumor-reactive T-cell repertoire in the immune infiltrate of patients with resectable pancreatic ductal adenocarcinoma

artículo científico publicado en 2016

Large-cell neuroendocrine carcinoma of the major duodenal papilla: case report

scientific article published on 01 November 2004

MEMOTE for standardized genome-scale metabolic model testing

artículo científico publicado en 2020

Main-duct Intraductal Papillary Mucinous Neoplasm: High Cancer Risk in Duct Diameter of 5 to 9 mm

artículo científico publicado en 2015

Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

article by Dagmar Waltemath et al published 15 March 2014 in Standards in genomic sciences

Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

Metastasis of rectal adenocarcinoma to the pancreas. Two case reports and a review of the literature

artículo científico publicado en 2007

Minimum Information About a Simulation Experiment (MIASE)

artículo científico publicado en 2011

Mononuclear cells modulate the activity of pancreatic stellate cells which in turn promote fibrosis and inflammation in chronic pancreatitis

artículo científico publicado en 2007

Most Pancreatic Cancer Resections are R1 Resections

Neural fractalkine expression is closely linked to pain and pancreatic neuritis in human chronic pancreatitis

artículo científico publicado en 2009

Oligoclonal T-cell populations in an inflammatory pseudotumor of the pancreas possibly related to autoimmune pancreatitis: an immunohistochemical and molecular analysis.

artículo científico publicado en 2004

Pain sensation in pancreatic diseases is not uniform: the different facets of pancreatic pain

artículo científico publicado en 2014

Pancreatic Cancer Surgery: The New R-status Counts

artículo científico publicado en 2016

Pancreatic cancer surgery in the new millennium: better prediction of outcome

artículo científico publicado en 2011

Pancreatic main-duct involvement in branch-duct IPMNs: an underestimated risk.

artículo científico publicado en 2014

Pancreatic metastasis from gastric carcinoma: a case report

artículo científico publicado en 2004

Pancreatic metastasis of Merkel cell carcinoma and concomitant insulinoma: case report and literature review

artículo científico publicado en 2005

Pancreatic neuropathy and neuropathic pain--a comprehensive pathomorphological study of 546 cases

artículo científico publicado en 2008

Pancreatic neuropathy results in "neural remodeling" and altered pancreatic innervation in chronic pancreatitis and pancreatic cancer.

artículo científico publicado en 2009

Piecewise parameter estimation for stochastic models in COPASI.

artículo científico publicado en 2016

Preoperative Serum Thymidine Kinase Activity as Novel Monitoring, Prognostic, and Predictive Biomarker in Pancreatic Cancer

artículo científico publicado en 2017

Prognostic significance of erythropoietin in pancreatic adenocarcinoma

artículo científico publicado en 2011

Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative

artículo científico publicado en 2015

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

artículo científico publicado en 2020

RIP3 attenuates the pancreatic damage induced by deletion of ATG7.

artículo científico publicado en 2017

Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language

artículo científico publicado en 2011

SBML Level 3 Package Proposal: Annotation

SBML Level 3 Package: Flux Balance Constraints version 2

scientific article published on 09 March 2018

SBML Level 3 package: Render, Version 1, Release 1

SBML Level 3: an extensible format for the exchange and reuse of biological models

artículo científico publicado en 2020

SBML2TikZ: supporting the SBML render extension in LaTeX.

artículo científico publicado en 2010

SBW - A Modular Framework for Systems Biology

SBtab: a flexible table format for data exchange in systems biology

artículo científico publicado en 2016

SED-ML Web Tools: Generate, modify and export standard-compliant simulation studies

SED-ML: Nested Simulation Proposal

Selective inhibition of the p38 alternative activation pathway in infiltrating T cells inhibits pancreatic cancer progression.

artículo científico publicado en 2015

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 2.

artículo científico

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3). ⬇️

artículo científico publicado en 2018

Small (Sendai negative) branch-duct IPMNs: not harmless

artículo científico publicado en 2012

Software Tools for Systems Biology

scholarly article published 2010

Software support for SBGN maps: SBGN-ML and LibSBGN.

artículo científico publicado en 2012

Solid type clear cell carcinoma of the pancreas: differential diagnosis of an unusual case and review of the literature

artículo científico publicado en 2007

Standards and ontologies in computational systems biology

artículo científico publicado en 2008

Supporting the SBML layout extension

artículo científico publicado en 2006

Survival data justifies resection for pancreatic metastases

artículo científico publicado en 2009

Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions

artículo científico publicado en 2015

Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions

Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1

artículo científico publicado en 2020

Systems biology graphical notation markup language (SBGNML) version 0.3.

scientific article published on 22 June 2020

The Systems Biology Markup Language (SBML) Level 3 Package: Flux Balance Constraints.

artículo científico

The Systems Biology Markup Language (SBML) Level 3 Package: Layout, Version 1 Core

artículo científico

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

artículo científico publicado en 2015

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2

artículo científico publicado en 2019

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core.

artículo científico publicado en 2018

The bile acid receptor FXR attenuates acinar cell autophagy in chronic pancreatitis

artículo científico publicado en 2017

The impact of MFG-E8 in chronic pancreatitis: potential for future immunotherapy?

artículo científico publicado en 2013

The neurotrophic factor artemin influences the extent of neural damage and growth in chronic pancreatitis

artículo científico publicado en 2006

The simulation experiment description markup language (SED-ML): language specification for level 1 version 5

artículo científico publicado en 2024

TinkerCell: modular CAD tool for synthetic biology

artículo científico publicado en 2009

Total pancreatectomy for primary pancreatic neoplasms: renaissance of an unpopular operation

artículo científico publicado en 2015

Toward Community Standards and Software for Whole-Cell Modeling

artículo científico publicado en 2016

Lista de obras de Frank Bergmann

15-lipoxygenase-1 production is lost in pancreatic cancer and overexpression of the gene inhibits tumor cell growth

A Portable Structural Analysis Library for Reaction Networks

A Profile of Today's SBML-Compatible Software

A novel animal model of severe pancreatitis in mice and its differences to the rat.

Acinar cell carcinoma of the pancreas: is resection justified even in limited metastatic disease?

Anaplastic pancreatic cancer: Presentation, surgical management, and outcome

Antimony: a modular model definition language

Autoimmune pancreatocholangitis, non-autoimmune pancreatitis and primary sclerosing cholangitis: a comparative morphological and immunological analysis

Bifurcation discovery tool

COMBINE Archive Specification Version 1.

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project

CXCL14 expression and potential function in pancreatic cancer

Cannabinoids in pancreatic cancer: correlation with survival and pain

Cannabinoids reduce markers of inflammation and fibrosis in pancreatic stellate cells

Clinical significance and regulation of the costimulatory molecule B7-H1 in pancreatic cancer

Clinicopathologic characteristics of patients with resected multifocal intraductal papillary mucinous neoplasm of the pancreas

Comparing simulation results of SBML capable simulators

Computational Tools for Modeling Protein Networks

Enucleation: A treatment alternative for branch duct intraductal papillary mucinous neoplasms

EnzymeML: seamless data flow and modeling of enzymatic data

Identification of a tumor-reactive T-cell repertoire in the immune infiltrate of patients with resectable pancreatic ductal adenocarcinoma

Large-cell neuroendocrine carcinoma of the major duodenal papilla: case report

MEMOTE for standardized genome-scale metabolic model testing

Main-duct Intraductal Papillary Mucinous Neoplasm: High Cancer Risk in Duct Diameter of 5 to 9 mm

Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

Metastasis of rectal adenocarcinoma to the pancreas. Two case reports and a review of the literature

Minimum Information About a Simulation Experiment (MIASE)

Mononuclear cells modulate the activity of pancreatic stellate cells which in turn promote fibrosis and inflammation in chronic pancreatitis

Most Pancreatic Cancer Resections are R1 Resections

Neural fractalkine expression is closely linked to pain and pancreatic neuritis in human chronic pancreatitis

Oligoclonal T-cell populations in an inflammatory pseudotumor of the pancreas possibly related to autoimmune pancreatitis: an immunohistochemical and molecular analysis.

Pain sensation in pancreatic diseases is not uniform: the different facets of pancreatic pain

Pancreatic Cancer Surgery: The New R-status Counts

Pancreatic cancer surgery in the new millennium: better prediction of outcome

Pancreatic main-duct involvement in branch-duct IPMNs: an underestimated risk.

Pancreatic metastasis from gastric carcinoma: a case report

Pancreatic metastasis of Merkel cell carcinoma and concomitant insulinoma: case report and literature review

Pancreatic neuropathy and neuropathic pain--a comprehensive pathomorphological study of 546 cases

Pancreatic neuropathy results in "neural remodeling" and altered pancreatic innervation in chronic pancreatitis and pancreatic cancer.

Piecewise parameter estimation for stochastic models in COPASI.

Preoperative Serum Thymidine Kinase Activity as Novel Monitoring, Prognostic, and Predictive Biomarker in Pancreatic Cancer

Prognostic significance of erythropoietin in pancreatic adenocarcinoma

Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

RIP3 attenuates the pancreatic damage induced by deletion of ATG7.

Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language

SBML Level 3 Package Proposal: Annotation

SBML Level 3 Package: Flux Balance Constraints version 2

SBML Level 3 package: Render, Version 1, Release 1

SBML Level 3: an extensible format for the exchange and reuse of biological models

SBML2TikZ: supporting the SBML render extension in LaTeX.

SBW - A Modular Framework for Systems Biology

SBtab: a flexible table format for data exchange in systems biology

SED-ML Web Tools: Generate, modify and export standard-compliant simulation studies

SED-ML Web Tools: Generate, modify and export standard-compliant simulation studies

SED-ML: Nested Simulation Proposal

Selective inhibition of the p38 alternative activation pathway in infiltrating T cells inhibits pancreatic cancer progression.

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 2.

Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3). ⬇️

Small (Sendai negative) branch-duct IPMNs: not harmless

Software Tools for Systems Biology

Software support for SBGN maps: SBGN-ML and LibSBGN.

Solid type clear cell carcinoma of the pancreas: differential diagnosis of an unusual case and review of the literature

Standards and ontologies in computational systems biology

Supporting the SBML layout extension

Survival data justifies resection for pancreatic metastases

Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions

Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions

Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1

Systems biology graphical notation markup language (SBGNML) version 0.3.

The Systems Biology Markup Language (SBML) Level 3 Package: Flux Balance Constraints.

The Systems Biology Markup Language (SBML) Level 3 Package: Layout, Version 1 Core

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core.

The bile acid receptor FXR attenuates acinar cell autophagy in chronic pancreatitis

The impact of MFG-E8 in chronic pancreatitis: potential for future immunotherapy?