Lista de obras - Michele Ceccarelli - Dominio Público Uruguay

"Stockpile" of Slight Transcriptomic Changes Determines the Indirect Genotoxicity of Low-Dose BPA in Thyroid Cells

artículo científico publicado en 2016

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two: National Harbor, MD, USA. 9-13 November 2016

artículo científico publicado en 2016

A deformable grid-matching approach for microarray images

artículo científico publicado en 2006

A negative selection heuristic to predict new transcriptional targets ⬇️

artículo científico publicado el 14 de enero de 2013

Automated identification and location analysis of marked stem cells colonies in optical microscopy images

artículo científico publicado en 2013

Cancer-related CD15/FUT4 overexpression decreases benefit to agents targeting EGFR or VEGF acting as a novel RAF-MEK-ERK kinase downstream regulator in metastatic colorectal cancer.

artículo científico publicado en 2015

Circulating microRNAs expression profile in newly diagnosed and imatinib treated chronic phase - chronic myeloid leukemia

scientific article published on 06 September 2018

Comparison between invasive breast cancer with extensive peritumoral vascular invasion and inflammatory breast carcinoma: a clinicopathologic study of 161 cases

artículo científico publicado en 2014

Correction to: Toward a comprehensive view of cancer immune responsiveness: a synopsis from the SITC workshop

scientific article published on 04 July 2019

Cross-species toxicogenomic analyses and phenotypic anchoring in response to groundwater low-level pollution

artículo científico publicado en 2014

Data Mining in Cancer Research [Application Notes

artículo científico publicado en 2010

De novo reconstruction of gene regulatory networks from time series data, an approach based on formal methods

artículo científico publicado en 2014

Deep learning predicts short non-coding RNA functions from only raw sequence data

artículo científico publicado en 2020

Detection of statistically significant network changes in complex biological networks

artículo científico publicado en 2017

Disentangling the relationship between tumor genetic programs and immune responsiveness

artículo científico publicado en 2016

Ensemble of gene signatures identifies novel biomarkers in colorectal cancer activated through PPARγ and TNFα signaling

artículo científico publicado en 2013

Evaluation of low doses BPA-induced perturbation of glycemia by toxicogenomics points to a primary role of pancreatic islets and to the mechanism of toxicity.

artículo científico publicado en 2015

Finding recurrent copy number alterations preserving within-sample homogeneity

artículo científico publicado en 2011

Gene expression profiling at early organogenesis reveals both common and diverse mechanisms in foregut patterning ⬇️

artículo científico publicado el 15 de noviembre de 2011

IRIS: a method for reverse engineering of regulatory relations in gene networks

artículo científico publicado en 2009

Identification and Validation of HCC-specific Gene Transcriptional Signature for Tumor Antigen Discovery

artículo científico publicado en 2016

Identification of a novel gene signature of ES cells self-renewal fluctuation through system-wide analysis

artículo científico publicado en 2014

Immune escape mechanisms in colorectal cancer pathogenesis and liver metastasis

artículo científico publicado en 2014

Integrative multi-omics networks identify PKCδ and DNA-PK as master kinases of glioblastoma subtypes and guide targeted cancer therapy

artículo científico publicado en 2023

Learning gene regulatory networks from only positive and unlabeled data

artículo científico publicado en 2010

Metabolic effects of the iodothyronine functional analogue TRC150094 on the liver and skeletal muscle of high-fat diet fed overweight rats: an integrated proteomic study.

artículo científico publicado en 2012

Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma

artículo científico

Novel pancreas organogenesis markers refine the pancreatic differentiation roadmap of embryonic stem cells

artículo científico publicado en 2014

Pathways affected by 3,5-diiodo-l-thyronine in liver of high fat-fed rats: evidence from two-dimensional electrophoresis, blue-native PAGE, and mass spectrometry

artículo científico publicado en 2010

Pesticide toxicogenomics across scales: in vitro transcriptome predicts mechanisms and outcomes of exposure in vivo

artículo científico publicado en 2016

Retinoic Acid Specifically Enhances Embryonic Stem Cell Metastate Marked by Zscan4

artículo científico publicado en 2016

Segmentation of 3D microscopy data with an energy based interaction model

Signaling networks associated with AKT activation in non-small cell lung cancer (NSCLC): new insights on the role of phosphatydil-inositol-3 kinase

artículo científico publicado en 2012

Systems biology analysis reveals NFAT5 as a novel biomarker and master regulator of inflammatory breast cancer.

artículo científico publicado en 2015

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data

artículo científico publicado en 2015

TRAF7 protein promotes Lys-29-linked polyubiquitination of IkappaB kinase (IKKgamma)/NF-kappaB essential modulator (NEMO) and p65/RelA protein and represses NF-kappaB activation

artículo científico publicado en 2011

The Akt1/IL-6/STAT3 pathway regulates growth of lung tumor initiating cells

artículo científico publicado en 2015

The chromatin remodelling component SMARCB1/INI1 influences the metastatic behavior of colorectal cancer through a gene signature mapping to chromosome 22.

artículo científico publicado en 2013

The molecular landscape of glioma in patients with Neurofibromatosis 1

artículo científico publicado en 2018

The possible role of chromosome X variability in hypertensive familiarity

artículo científico publicado en 2016

Time-lapse phase-contrast microscopy fibroblast automated tracking

TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach

artículo científico publicado en 2010

Toward a comprehensive view of cancer immune responsiveness: a synopsis from the SITC workshop

artículo científico publicado en 2019

Transforming fusions of FGFR and TACC genes in human glioblastoma

artículo científico publicado en 2012

UHRF1 coordinates peroxisome proliferator activated receptor gamma (PPARG) epigenetic silencing and mediates colorectal cancer progression.

artículo científico publicado en 2012

Upregulation of miR-21 by Ras in vivo and its role in tumor growth.

artículo científico publicado en 2010

VEGA: variational segmentation for copy number detection

artículo científico publicado en 2010

VEGAWES: variational segmentation on whole exome sequencing for copy number detection

artículo científico publicado en 2015

VegaMC: a R/bioconductor package for fast downstream analysis of large array comparative genomic hybridization datasets ⬇️

artículo científico publicado el 18 de julio de 2012

Virtual genetic coding and time series analysis for alternative splicing prediction in C. elegans.

artículo científico publicado en 2008

Lista de obras de Michele Ceccarelli

"Stockpile" of Slight Transcriptomic Changes Determines the Indirect Genotoxicity of Low-Dose BPA in Thyroid Cells

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two: National Harbor, MD, USA. 9-13 November 2016

A deformable grid-matching approach for microarray images

A negative selection heuristic to predict new transcriptional targets ⬇️

Automated identification and location analysis of marked stem cells colonies in optical microscopy images

Cancer-related CD15/FUT4 overexpression decreases benefit to agents targeting EGFR or VEGF acting as a novel RAF-MEK-ERK kinase downstream regulator in metastatic colorectal cancer.

Circulating microRNAs expression profile in newly diagnosed and imatinib treated chronic phase - chronic myeloid leukemia

Comparison between invasive breast cancer with extensive peritumoral vascular invasion and inflammatory breast carcinoma: a clinicopathologic study of 161 cases

Correction to: Toward a comprehensive view of cancer immune responsiveness: a synopsis from the SITC workshop

Cross-species toxicogenomic analyses and phenotypic anchoring in response to groundwater low-level pollution

Data Mining in Cancer Research [Application Notes

De novo reconstruction of gene regulatory networks from time series data, an approach based on formal methods

Deep learning predicts short non-coding RNA functions from only raw sequence data

Detection of statistically significant network changes in complex biological networks

Disentangling the relationship between tumor genetic programs and immune responsiveness

Ensemble of gene signatures identifies novel biomarkers in colorectal cancer activated through PPARγ and TNFα signaling

Evaluation of low doses BPA-induced perturbation of glycemia by toxicogenomics points to a primary role of pancreatic islets and to the mechanism of toxicity.

Finding recurrent copy number alterations preserving within-sample homogeneity

Gene expression profiling at early organogenesis reveals both common and diverse mechanisms in foregut patterning ⬇️

IRIS: a method for reverse engineering of regulatory relations in gene networks

Identification and Validation of HCC-specific Gene Transcriptional Signature for Tumor Antigen Discovery

Identification of a novel gene signature of ES cells self-renewal fluctuation through system-wide analysis

Immune escape mechanisms in colorectal cancer pathogenesis and liver metastasis

Integrative multi-omics networks identify PKCδ and DNA-PK as master kinases of glioblastoma subtypes and guide targeted cancer therapy

Learning gene regulatory networks from only positive and unlabeled data

Metabolic effects of the iodothyronine functional analogue TRC150094 on the liver and skeletal muscle of high-fat diet fed overweight rats: an integrated proteomic study.

Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma

Novel pancreas organogenesis markers refine the pancreatic differentiation roadmap of embryonic stem cells

Pathways affected by 3,5-diiodo-l-thyronine in liver of high fat-fed rats: evidence from two-dimensional electrophoresis, blue-native PAGE, and mass spectrometry

Pesticide toxicogenomics across scales: in vitro transcriptome predicts mechanisms and outcomes of exposure in vivo

Retinoic Acid Specifically Enhances Embryonic Stem Cell Metastate Marked by Zscan4

Segmentation of 3D microscopy data with an energy based interaction model

Signaling networks associated with AKT activation in non-small cell lung cancer (NSCLC): new insights on the role of phosphatydil-inositol-3 kinase

Systems biology analysis reveals NFAT5 as a novel biomarker and master regulator of inflammatory breast cancer.

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data

TRAF7 protein promotes Lys-29-linked polyubiquitination of IkappaB kinase (IKKgamma)/NF-kappaB essential modulator (NEMO) and p65/RelA protein and represses NF-kappaB activation

The Akt1/IL-6/STAT3 pathway regulates growth of lung tumor initiating cells

The chromatin remodelling component SMARCB1/INI1 influences the metastatic behavior of colorectal cancer through a gene signature mapping to chromosome 22.

The molecular landscape of glioma in patients with Neurofibromatosis 1

The possible role of chromosome X variability in hypertensive familiarity

Time-lapse phase-contrast microscopy fibroblast automated tracking

TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach

Toward a comprehensive view of cancer immune responsiveness: a synopsis from the SITC workshop

Transforming fusions of FGFR and TACC genes in human glioblastoma

UHRF1 coordinates peroxisome proliferator activated receptor gamma (PPARG) epigenetic silencing and mediates colorectal cancer progression.

Upregulation of miR-21 by Ras in vivo and its role in tumor growth.

VEGA: variational segmentation for copy number detection

VEGAWES: variational segmentation on whole exome sequencing for copy number detection

VegaMC: a R/bioconductor package for fast downstream analysis of large array comparative genomic hybridization datasets ⬇️

Virtual genetic coding and time series analysis for alternative splicing prediction in C. elegans.