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Lista de obras de Luke Swenson

"Dynamic range" of inferred phenotypic HIV drug resistance values in clinical practice

artículo científico publicado en 2011

Calibration and accuracy of the geno2pheno co-receptor algorithm for predicting HIV tropism for single and triplicate measurements of V3 genotype

artículo científico publicado en 2010

Comparative performances of HIV-1 RNA load assays at low viral load levels: results of an international collaboration.

scientific article published on 04 December 2013

Deep V3 Sequencing for HIV Type 1 Tropism in Treatment-Naive Patients: A Reanalysis of the MERIT Trial of Maraviroc

article

Deep sequencing to infer HIV-1 co-receptor usage: application to three clinical trials of maraviroc in treatment-experienced patients

artículo científico publicado en 2011

Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing

artículo científico publicado en 2011

Development of a novel codon-specific polymerase chain reaction for the detection of CXCR4-utilizing HIV type 1 subtype B.

artículo científico publicado en 2013

Factors influencing the sensitivity and specificity of conventional sequencing in human immunodeficiency virus type 1 tropism testing.

artículo científico publicado en 2012

Genotypic analysis of the V3 region of HIV from virologic nonresponders to maraviroc-containing regimens reveals distinct patterns of failure

artículo científico publicado en 2013

Genotypic inference of HIV-1 tropism using population-based sequencing of V3.

artículo científico publicado en 2010

HIV coreceptor phenotyping in the clinical setting.

artículo científico publicado en 2008

HIV drug resistance detected during low-level viraemia is associated with subsequent virologic failure

artículo científico publicado en 2014

HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins

artículo científico publicado en 2009

Improved detection of CXCR4-using HIV by V3 genotyping: application of population-based and "deep" sequencing to plasma RNA and proviral DNA.

artículo científico publicado en 2010

Influence of amount and percentage of CXCR4-using virus in predicting week 48 responses to maraviroc in treatment-naïve patients

article

Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially

artículo científico publicado en 2011

Next-generation sequencing to assess HIV tropism

artículo científico

Performance of HIV-1 drug resistance testing at low-level viremia and its ability to predict future virologic outcomes and viral evolution in treatment-naive individuals

artículo científico publicado en 2014

Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1.

artículo científico publicado en 2009

Prolonged and substantial discordance in prevalence of raltegravir-resistant HIV-1 in plasma versus PBMC samples revealed by 454 "deep" sequencing

artículo científico publicado en 2012

Reconstructing the Dynamics of HIV Evolution within Hosts from Serial Deep Sequence Data

artículo científico publicado en 2012

Reply to "Issues on results of the external quality assessment for proviral DNA testing of HIV-1 Tropism in the Maraviroc Switch collaborative study".

artículo científico publicado en 2013

Results of external quality assessment for proviral DNA testing of HIV tropism in the Maraviroc Switch collaborative study

artículo científico publicado en 2013

Short-term variation of HIV tropism readouts in the absence of CCR5 antagonists

article

Technical and regulatory shortcomings of the TaqMan version 1 HIV viral load assay

artículo científico publicado en 2012

Use of Cellular HIV DNA to Predict Virologic Response to Maraviroc: Performance of Population-Based and Deep Sequencing

artículo científico publicado en 2013

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