Lista de obras - Roger E Bumgarner - Dominio Público Uruguay

A prioritization analysis of disease association by data-mining of functional annotation of human genes

artículo científico publicado en 2011

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies

artículo científico publicado en 2006

A three-way comparative genomic analysis of Mannheimia haemolytica isolates

artículo científico publicado en 2010

An analysis of the dynamic range and linearity of an infrared DNA sequencer

artículo científico publicado en 1996

An expressed-sequence-tag database of the human prostate: sequence analysis of 1168 cDNA clones.

artículo científico publicado en 1998

Attenuation of the type I interferon response in cells infected with human rhinovirus

artículo científico publicado en 2008

Bacterial communities in women with bacterial vaginosis: high resolution phylogenetic analyses reveal relationships of microbiota to clinical criteria

artículo científico publicado en 2012

Bayesian model averaging: development of an improved multi-class, gene selection and classification tool for microarray data

artículo científico publicado en 2005

Bayesian robust inference for differential gene expression in microarrays with multiple samples

artículo científico publicado en 2006

Benzene Forms Hydrogen Bonds with Water

artículo científico publicado en 1992

Cellular gene expression upon human immunodeficiency virus type 1 infection of CD4(+)-T-cell lines

artículo científico publicado en 2003

Cellular transcriptional profiling in influenza A virus-infected lung epithelial cells: the role of the nonstructural NS1 protein in the evasion of the host innate defense and its potential contribution to pandemic influenza

artículo científico publicado en 2002

Characterization of the effects of an rpoC mutation that confers resistance to the Fst peptide toxin-antitoxin system toxin

artículo científico publicado en 2012

Chlamydia trachomatis infection alters host cell transcription in diverse cellular pathways

artículo científico publicado en 2003

Chlamydia trachomatis variant with nonfusing inclusions: growth dynamic and host-cell transcriptional response

artículo científico publicado en 2005

Clustering gene-expression data with repeated measurements

artículo científico publicado en 2003

Comparative genomic analysis of seven Mycoplasma hyosynoviae strains

artículo científico publicado en 2015

Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans.

artículo científico publicado en 2012

Comparative genomics of susceptibility to mammary carcinogenesis among inbred rat strains: role of reduced prolactin signaling in resistance of the Copenhagen strain

artículo científico publicado en 2007

Construction of regulatory networks using expression time-series data of a genotyped population

artículo científico publicado en 2011

Context-specific infinite mixtures for clustering gene expression profiles across diverse microarray dataset.

artículo científico publicado en 2006

Development of the Minimum Information Specification for In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE).

artículo científico publicado en 2006

Differential gene expression profiling of adult murine hematopoietic stem cells

artículo científico publicado en 2002

Donuts, scratches and blanks: robust model-based segmentation of microarray images

artículo científico publicado en 2005

Erratum: Corrigendum: Direct multiplexed measurement of gene expression with color-coded probe pairs

article

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

artículo científico publicado en 2007

From co-expression to co-regulation: how many microarray experiments do we need?

artículo científico publicado en 2004

Functional annotation from predicted protein interaction networks

artículo científico publicado en 2005

Gene Expression Profiling of the Cellular Transcriptional Network Regulated by Alpha/Beta Interferon and Its Partial Attenuation by the Hepatitis C Virus Nonstructural 5A Protein

artículo científico publicado en 2003

Gene expression in Pseudomonas aeruginosa biofilms

artículo científico publicado en 2001

Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1.

artículo científico publicado en 2009

Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales

artículo científico publicado en 2011

Genome sequence of a novel species, Propionibacterium humerusii

artículo científico publicado en 2011

Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual

artículo científico publicado en 2012

Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1

artículo científico publicado en 2010

Genome sequences of Mannheimia haemolytica serotype A2: ovine and bovine isolates

artículo científico publicado en 2009

Genomic Stability of Aggregatibacter actinomycetemcomitans during Persistent Oral Infection in Human

artículo científico publicado en 2013

Hierarchical gene expression profiles of HUVEC stimulated by different lipid A structures obtained from Porphyromonas gingivalis and Escherichia coli

artículo científico publicado en 2006

High-density lipoprotein suppresses the type I interferon response, a family of potent antiviral immunoregulators, in macrophages challenged with lipopolysaccharide

artículo científico publicado en 2010

Human rhinovirus attenuates the type I interferon response by disrupting activation of interferon regulatory factor 3.

artículo científico publicado en 2006

Human rhinovirus attenuates the type I interferon response by disrupting activation of interferon regulatory factor 3.

artículo científico publicado en 2007

Identification of the pangenome and its components in 14 distinct Aggregatibacter actinomycetemcomitans strains by comparative genomic analysis

artículo científico publicado en 2011

Independent and Cooperative Antiviral Actions of Beta Interferon and Gamma Interferon against Herpes Simplex Virus Replication in Primary Human Fibroblasts

artículo científico publicado en 2008

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

artículo científico publicado en 2001

Integrating external biological knowledge in the construction of regulatory networks from time-series expression data

artículo científico publicado en 2012

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

artículo científico publicado en 2008

Interaction of pseudomonas aeruginosa with epithelial cells: identification of differentially regulated genes by expression microarray analysis of human cDNAs

artículo científico publicado en 2000

Iterative Bayesian Model Averaging: a method for the application of survival analysis to high-dimensional microarray data

artículo científico publicado en 2009

Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays.

artículo científico publicado en 2000

Laser capture microdissection enables cellular and molecular studies of tooth root development

artículo científico publicado en 2012

Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans

artículo científico publicado en 2010

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis

artículo científico publicado en 2008

Methods for the inference of biological pathways and networks

scientific article published on January 2009

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

artículo científico publicado en 2008

Multiclass classification of microarray data with repeated measurements: application to cancer

artículo científico publicado en 2003

Multifunctionality of PAI-1 in fibrogenesis: evidence from obstructive nephropathy in PAI-1-overexpressing mice

artículo científico publicado en 2005

Negative selection: a method for obtaining low-abundance cDNAs using high-density cDNA clone arrays

artículo científico publicado en 1999

On the persistence of supplementary resources in biomedical publications

artículo científico publicado en 2006

PEDB: the Prostate Expression Database

artículo científico publicado en 1999

Phylobook: a tool for display, clade annotation and extraction of sequences from molecular phylogenies

artículo científico publicado en 2024

Propionibacterium persists in the skin despite standard surgical preparation

artículo científico publicado en 2014

Proteomic and computational analysis of bronchoalveolar proteins during the course of the acute respiratory distress syndrome

artículo científico publicado en 2008

Protinfo PPC: a web server for atomic level prediction of protein complexes

artículo científico publicado en 2009

Quality Control and Robust Estimation for cDNA Microarrays With Replicates

RNA amplification, fidelity and reproducibility of expression profiling

artículo científico publicado en 2003

Relationships between deficits in tissue mass and transcriptional programs after partial hepatectomy in mice

artículo científico publicado en 2009

Rosaceaous Genome Sequencing: Perspectives and Progress

Sample size for detecting differentially expressed genes in microarray experiments.

artículo científico publicado en 2004

Stitching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation

artículo científico publicado en 2012

The Transcriptome and Its Translation during Recovery from Cell Cycle Arrest inSaccharomyces cerevisiae

The derivation of diagnostic markers of chronic myeloid leukemia progression from microarray data

artículo científico publicado en 2009

The genome of the domesticated apple (Malus × domestica Borkh.)

artículo científico publicado en 2010

The prostate expression database (PEDB): status and enhancements in 2000.

artículo científico publicado en 2000

Validation of an oligonucleotide ligation assay for quantification of human immunodeficiency virus type 1 drug-resistant mutants by use of massively parallel sequencing

artículo científico publicado en 2014

What Is the Best Reference RNA? And Other Questions Regarding the Design and Analysis of Two-color Microarray Experiments

article

cDNA microarray analysis reveals fundamental differences in the expression profiles of primary human monocytes, monocyte-derived macrophages, and alveolar macrophages.

artículo científico publicado en 2006

Lista de obras de Roger E Bumgarner

A prioritization analysis of disease association by data-mining of functional annotation of human genes

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies

A three-way comparative genomic analysis of Mannheimia haemolytica isolates

An analysis of the dynamic range and linearity of an infrared DNA sequencer

An expressed-sequence-tag database of the human prostate: sequence analysis of 1168 cDNA clones.

Attenuation of the type I interferon response in cells infected with human rhinovirus

Bacterial communities in women with bacterial vaginosis: high resolution phylogenetic analyses reveal relationships of microbiota to clinical criteria

Bayesian model averaging: development of an improved multi-class, gene selection and classification tool for microarray data

Bayesian robust inference for differential gene expression in microarrays with multiple samples

Benzene Forms Hydrogen Bonds with Water

Cellular gene expression upon human immunodeficiency virus type 1 infection of CD4(+)-T-cell lines

Cellular transcriptional profiling in influenza A virus-infected lung epithelial cells: the role of the nonstructural NS1 protein in the evasion of the host innate defense and its potential contribution to pandemic influenza

Characterization of the effects of an rpoC mutation that confers resistance to the Fst peptide toxin-antitoxin system toxin

Chlamydia trachomatis infection alters host cell transcription in diverse cellular pathways

Chlamydia trachomatis variant with nonfusing inclusions: growth dynamic and host-cell transcriptional response

Clustering gene-expression data with repeated measurements

Comparative genomic analysis of seven Mycoplasma hyosynoviae strains

Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans.

Comparative genomics of susceptibility to mammary carcinogenesis among inbred rat strains: role of reduced prolactin signaling in resistance of the Copenhagen strain

Construction of regulatory networks using expression time-series data of a genotyped population

Context-specific infinite mixtures for clustering gene expression profiles across diverse microarray dataset.

Development of the Minimum Information Specification for In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE).

Differential gene expression profiling of adult murine hematopoietic stem cells

Donuts, scratches and blanks: robust model-based segmentation of microarray images

Erratum: Corrigendum: Direct multiplexed measurement of gene expression with color-coded probe pairs

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

From co-expression to co-regulation: how many microarray experiments do we need?

Functional annotation from predicted protein interaction networks

Gene Expression Profiling of the Cellular Transcriptional Network Regulated by Alpha/Beta Interferon and Its Partial Attenuation by the Hepatitis C Virus Nonstructural 5A Protein

Gene expression in Pseudomonas aeruginosa biofilms

Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1.

Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales

Genome sequence of a novel species, Propionibacterium humerusii

Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual

Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1

Genome sequences of Mannheimia haemolytica serotype A2: ovine and bovine isolates

Genomic Stability of Aggregatibacter actinomycetemcomitans during Persistent Oral Infection in Human

Hierarchical gene expression profiles of HUVEC stimulated by different lipid A structures obtained from Porphyromonas gingivalis and Escherichia coli

High-density lipoprotein suppresses the type I interferon response, a family of potent antiviral immunoregulators, in macrophages challenged with lipopolysaccharide

Human rhinovirus attenuates the type I interferon response by disrupting activation of interferon regulatory factor 3.

Human rhinovirus attenuates the type I interferon response by disrupting activation of interferon regulatory factor 3.

Identification of the pangenome and its components in 14 distinct Aggregatibacter actinomycetemcomitans strains by comparative genomic analysis

Independent and Cooperative Antiviral Actions of Beta Interferon and Gamma Interferon against Herpes Simplex Virus Replication in Primary Human Fibroblasts

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

Integrating external biological knowledge in the construction of regulatory networks from time-series expression data

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

Interaction of pseudomonas aeruginosa with epithelial cells: identification of differentially regulated genes by expression microarray analysis of human cDNAs

Iterative Bayesian Model Averaging: a method for the application of survival analysis to high-dimensional microarray data

Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays.

Laser capture microdissection enables cellular and molecular studies of tooth root development

Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis

Methods for the inference of biological pathways and networks

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Multiclass classification of microarray data with repeated measurements: application to cancer

Multifunctionality of PAI-1 in fibrogenesis: evidence from obstructive nephropathy in PAI-1-overexpressing mice

Negative selection: a method for obtaining low-abundance cDNAs using high-density cDNA clone arrays

On the persistence of supplementary resources in biomedical publications

PEDB: the Prostate Expression Database

Phylobook: a tool for display, clade annotation and extraction of sequences from molecular phylogenies

Propionibacterium persists in the skin despite standard surgical preparation

Proteomic and computational analysis of bronchoalveolar proteins during the course of the acute respiratory distress syndrome

Protinfo PPC: a web server for atomic level prediction of protein complexes

Quality Control and Robust Estimation for cDNA Microarrays With Replicates

RNA amplification, fidelity and reproducibility of expression profiling

Relationships between deficits in tissue mass and transcriptional programs after partial hepatectomy in mice

Rosaceaous Genome Sequencing: Perspectives and Progress

Sample size for detecting differentially expressed genes in microarray experiments.

Stitching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation

The Transcriptome and Its Translation during Recovery from Cell Cycle Arrest inSaccharomyces cerevisiae

The derivation of diagnostic markers of chronic myeloid leukemia progression from microarray data

The genome of the domesticated apple (Malus × domestica Borkh.)

The prostate expression database (PEDB): status and enhancements in 2000.

Validation of an oligonucleotide ligation assay for quantification of human immunodeficiency virus type 1 drug-resistant mutants by use of massively parallel sequencing

What Is the Best Reference RNA? And Other Questions Regarding the Design and Analysis of Two-color Microarray Experiments

cDNA microarray analysis reveals fundamental differences in the expression profiles of primary human monocytes, monocyte-derived macrophages, and alveolar macrophages.