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A comparative experimental and multiphysics computational fluid dynamics study of coupled surface-subsurface flow in bed forms

article

A diver-operated hyperspectral imaging and topographic surveying system for automated mapping of benthic habitats

artículo científico publicado en 2017

A fast-responding CO2microelectrode for profiling sediments, microbial mats, and biofilms

artículo científico publicado en 1997

A method for imaging of low pH in live cells based on excited state saturation

artículo científico publicado en 2009

A method to determine photosynthetic activity from oxygen microsensor data in biofilms subjected to evaporation

artículo científico publicado en 2015

A new tool for long-term studies of POM-bacteria interactions: overcoming the century-old Bottle Effect

artículo científico publicado en 2015

A nitrate-selective microelectrode based on a lipophilic derivative of iodocobalt(III)salen

A novel, mat-forming Thiomargarita population associated with a sulfidic fluid flow from a deep-sea mud volcano

artículo científico publicado en 2010

Abundance and diversity of aerobic heterotrophic microorganisms and their interaction with cyanobacteria in the oxic layer of an intertidal hypersaline cyanobacterial mat.

artículo científico publicado en 2017

Aerobic denitrification in permeable Wadden Sea sediments

artículo científico publicado en 2009

Aerobic organic carbon mineralization by sulfate-reducing bacteria in the oxygen-saturated photic zone of a hypersaline microbial mat.

artículo científico publicado en 2005

Anoxygenic photosynthesis controls oxygenic photosynthesis in a cyanobacterium from a sulfidic spring

artículo científico publicado en 2015

Arctic Coralline Algae Elevate Surface pH and Carbonate in the Dark

article published in 2018

Bacterial diversity of a cyanobacterial mat degrading petroleum compounds at elevated salinities and temperatures

artículo científico publicado en 2006

Biofilm structural heterogeneity visualized by three microscopic methods

scholarly article by Philip S. Stewart et al published August 1995 in Water Research

Biological and chemical sulfide oxidation in a Beggiatoa inhabited marine sediment

artículo científico publicado en 2007

Biotic Control of Surface pH and Evidence of Light-Induced H+ Pumping and Ca2+-H+ Exchange in a Tropical Crustose Coralline Alga

artículo científico publicado en 2016

CO2 leakage alters biogeochemical and ecological functions of submarine sands.

artículo científico publicado en 2018

Changes in microbial communities in coastal sediments along natural CO2 gradients at a volcanic vent in Papua New Guinea

artículo científico publicado en 2014

Characterization of denitrifying granular sludge with and without the addition of external carbon source.

artículo científico publicado en 2012

Chimney construction byChironomus ripariuslarvae in response to hypoxia: microbial implications for freshwater sediments

Close association of active nitrifiers with Beggiatoa mats covering deep-sea hydrothermal sediments

artículo científico publicado en 2013

Colonies of marine cyanobacteria Trichodesmium interact with associated bacteria to acquire iron from dust

scientific article published on 02 August 2019

Combined gel probe and isotope labeling technique for measuring dissimilatory nitrate reduction to ammonium in sediments at millimeter-level resolution

artículo científico publicado en 2010

Community structure and activity of a highly dynamic and nutrient-limited hypersaline microbial mat in Um Alhool Sabkha, Qatar

artículo científico publicado en 2014

Contribution of Chloroflexus respiration to oxygen cycling in a hypersaline microbial mat from Lake Chiprana, Spain

artículo científico publicado en 2007

Conversion and conservation of light energy in a photosynthetic microbial mat ecosystem

artículo científico publicado en 2009

Cultivation-independent characterization of 'Candidatus Magnetobacterium bavaricum' via ultrastructural, geochemical, ecological and metagenomic methods.

artículo científico publicado en 2010

Cyanobacteria in Sulfidic Spring Microbial Mats Can Perform Oxygenic and Anoxygenic Photosynthesis Simultaneously during an Entire Diurnal Period

artículo científico publicado en 2016

Cyanobacterial photosynthesis under sulfidic conditions: insights from the isolate Leptolyngbya sp. strain hensonii

artículo científico publicado en 2018

Degradation of 2,4-dichlorophenoxyacetic acid (2,4-d) by a hypersaline microbial mat and related functional changes in the mat community

artículo científico publicado en 2004

Degradation of petroleum model compounds immobilized on clay by a hypersaline microbial mat.

artículo científico publicado en 2002

Denitrification in human dental plaque

artículo científico publicado en 2010

Diatoms respire nitrate to survive dark and anoxic conditions

artículo científico publicado en 2011

Direct Nitrous Oxide Emission from the Aquacultured Pacific White Shrimp (Litopenaeus vannamei)

artículo científico publicado en 2016

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea.

artículo científico publicado en 2014

Dissolution of calcite in the twilight zone: bacterial control of dissolution of sinking planktonic carbonates is unlikely

artículo científico publicado en 2011

Distribution of sulfate-reducing and methanogenic bacteria in anaerobic aggregates determined by microsensor and molecular analyses

artículo científico publicado en 1999

Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge

artículo científico publicado en 2005

Diversity and vertical distribution of magnetotactic bacteria along chemical gradients in freshwater microcosms

artículo científico publicado en 2004

Effect of high electron donor supply on dissimilatory nitrate reduction pathways in a bioreactor for nitrate removal

artículo científico publicado en 2014

Effect of nitrate on sulfur transformations in sulfidogenic sludge of a marine aquaculture biofilter.

artículo científico publicado en 2010

Effect of oxygen concentration on photosynthesis and respiration in two hypersaline microbial mats

artículo científico publicado en 2002

Effect of salinity changes on the bacterial diversity, photosynthesis and oxygen consumption of cyanobacterial mats from an intertidal flat of the Arabian Gulf

artículo científico publicado en 2007

Effect of sulfate on low-temperature anaerobic digestion

artículo científico publicado en 2014

Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments

artículo científico publicado en 2015

Effects of biofilm structures on oxygen distribution and mass transport

artículo científico publicado en 1994

Effects of suspended sediments and nutrient enrichment on juvenile corals

artículo científico publicado en 2017

Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm

artículo científico publicado en 2001

Eruption of a deep-sea mud volcano triggers rapid sediment movement

artículo científico publicado en 2014

Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments.

artículo científico publicado en 2017

Evidence for water-mediated mechanisms in coral-algal interactions

artículo científico publicado en 2016

Evidence of nitrification and denitrification in high and low microbial abundance sponges

artículo científico publicado en 2009

Filamentous giant from Guaymas Basin are capable of both denitrification and dissimilatory nitrate reduction to ammonium (DNRA)

artículo científico publicado en 2018

Fine-scale measurement of diffusivity in a microbial mat with nuclear magnetic resonance imaging

Flowing biofilms as a transport mechanism for biomass through porous media under laminar and turbulent conditions in a laboratory reactor system

artículo científico publicado en 2005

Full in vivo characterization of carbonate chemistry at the site of calcification in corals

scientific article published on 16 January 2019

Functioning of intertidal flats inferred from temporal and spatial dynamics of O2, H2S and pH in their surface sediment

Geochemical and microbiological fingerprinting of airborne dust that fell in Canberra, Australia, in October 2002

article

Geochemical processes and chemosynthetic primary production in different thiotrophic mats of the Håkon Mosby Mud Volcano (Barents Sea)

article

Halotaxis of cyanobacteria in an intertidal hypersaline microbial mat.

artículo científico publicado en 2009

Heterogeneous Distribution of Microbial Activity in Methanogenic Aggregates: pH and Glucose Microprofiles.

artículo científico publicado en 1993

High Nitrification Rate at Low pH in a Fluidized Bed Reactor with either Chalk or Sintered Glass as the Biofilm Carrier

High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem

artículo científico publicado en 2015

High rates of denitrification and nitrous oxide emission in arid biological soil crusts from the Sultanate of Oman

artículo científico publicado en 2013

High resolution functional analysis and community structure of photogranules

artículo científico publicado en 2023

High spatial resolution measurement of oxygen consumption rates in permeable sediments

scientific article published in 2005

High temporal resolution of hydrogen peroxide (H2O2) dynamics during heat stress does not support a causative role in coral bleaching

artículo científico publicado en 2024

Hydrogen sulfide can inhibit and enhance oxygenic photosynthesis in a cyanobacterium from sulfidic springs

article

Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor

artículo científico publicado en 1998

Identification of bacteria potentially responsible for oxic and anoxic sulfide oxidation in biofilters of a recirculating mariculture system

artículo científico publicado en 2005

Impact of nitrate on the structure and function of bacterial biofilm communities in pipelines used for injection of seawater into oil fields

artículo científico publicado en 2008

Impacts of Warming and Acidification on Coral Calcification Linked to Photosymbiont Loss and Deregulation of Calcifying Fluid pH

artículo científico publicado en 2022

In situ coral reef oxygen metabolism: an eddy correlation study

artículo científico publicado en 2013

In situ distribution and activity of nitrifying bacteria in freshwater sediment

artículo científico publicado en 2003

In situ fluxes and zonation of microbial activity in surface sediments of the Håkon Mosby Mud Volcano

scholarly article by Dirk De Beer et al published May 2006 in Limnology and Oceanography

In situ oxygen dynamics in coral-algal interactions

artículo científico publicado en 2012

In situ substrate conversion and assimilation by nitrifying bacteria in a model biofilm

artículo científico publicado en 2005

Insights into the genome of large sulfur bacteria revealed by analysis of single filaments

artículo científico publicado en 2007

Intracellular nitrate storage by diatoms can be an important nitrogen pool in freshwater and marine ecosystems

artículo científico publicado en 2022

Light utilization efficiency in photosynthetic microbial mats

artículo científico publicado en 2011

Limitation of oxygenic photosynthesis and oxygen consumption by phosphate and organic nitrogen in a hypersaline microbial mat: a microsensor study

artículo científico publicado en 2006

Liquid flow and mass transport in heterogeneous biofilms

article published in 1996

Liquid flow in heterogeneous biofilms.

artículo científico publicado en 1994

Longitudinal Telomere Erosion in Lymphocyte Subsets of Patients with Atherosclerotic Peripheral Arterial Disease (PAD).

artículo científico publicado en 2015

Low-Light Anoxygenic Photosynthesis and Fe-S-Biogeochemistry in a Microbial Mat.

artículo científico publicado en 2018

Manganese oxidation by microbial consortia from sand filters

artículo científico publicado en 1992

Measurement of local diffusion coefficients in biofilms by microinjection and confocal microscopy.

artículo científico publicado en 1997

Mechanisms of damage to corals exposed to sedimentation

artículo científico publicado en 2012

Mechanisms of transient nitric oxide and nitrous oxide production in a complex biofilm.

artículo científico publicado en 2009

Metabolic microenvironmental control by photosynthetic biofilms under changing macroenvironmental temperature and pH conditions

artículo científico publicado en 2008

Metabolic shifts in hypersaline microbial mats upon addition of organic substrates

artículo científico publicado en 2002

Metabolically active microbial communities in marine sediment under high-CO(2) and low-pH extremes

artículo científico publicado en 2013

Methane and sulfide fluxes in permanent anoxia: In situ studies at the Dvurechenskii mud volcano (Sorokin Trough, Black Sea)

scholarly article by Anna Lichtschlag et al published September 2010 in Geochimica et Cosmochimica Acta

Micro-Electrodes

Microbial Biofilms

article published in 2013

Microbial Biofilms

Microbial and chemical characterization of underwater fresh water springs in the Dead Sea

artículo científico publicado en 2012

Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea.

artículo científico publicado en 2006

Microbial diversity of a heavily polluted microbial mat and its community changes following degradation of petroleum compounds.

artículo científico publicado en 2002

Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia

artículo científico publicado en 2012

Microbial effects on biofilm calcification, ambient water chemistry and stable isotope records in a highly supersaturated setting (Westerhöfer Bach, Germany)

article

Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)

article

Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm.

artículo científico publicado en 2000

Microenvironments of reduced salinity harbour biofilms in Dead Sea underwater springs

artículo científico publicado en 2014

Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: quantification by in situ hybridization and the use of microsensors.

artículo científico publicado en 1999

Microscale profiling of photosynthesis-related variables in a highly productive biofilm photobioreactor

artículo científico publicado en 2015

Microscopic oxygen imaging based on fluorescein bleaching efficiency measurements

artículo científico publicado en 2014

Microsensor Studies of Oxygen, Carbon, and Nitrogen Cycles in Lake Sediments and Microbial Mats

article

Microsensor for radioactivity

Microsensor studies on Padina from a natural CO2 seep: implications of morphology on acclimation to low pH.

artículo científico publicado en 2015

Microsensor study of photosynthesis and calcification in the scleractinian coral, Galaxea fascicularis: active internal carbon cycle

scholarly article by Fuad A. Al-Horani et al published March 2003 in Journal of Experimental Marine Biology and Ecology

Microsensors for Sediments, Microbial Mats, and Biofilms

Miniaturised carbon dioxide sensor designed for measurements within plant leaves

article

Modular spectral imaging system for discrimination of pigments in cells and microbial communities

artículo científico publicado en 2008

Molecular characterization of bacteria associated with the trophosome and the tube of Lamellibrachia sp., a siboglinid annelid from cold seeps in the eastern Mediterranean

artículo científico publicado en 2009

N2 fixation in free-floating filaments of Trichodesmium is higher than in transiently suboxic colony microenvironments

artículo científico publicado en 2018

New highly fluorescent pH indicator for ratiometric RGB imaging of pCO2.

artículo científico publicado en 2014

Niche differentiation among mat-forming, sulfide-oxidizing bacteria at cold seeps of the Nile Deep Sea Fan (Eastern Mediterranean Sea).

artículo científico publicado en 2011

Nitric Oxide Microsensor for High Spatial Resolution Measurements in Biofilms and Sediments

artículo científico publicado en 2008

Nitrification in a biofilm at low pH values: role of in situ microenvironments and acid tolerance

artículo científico publicado en 2006

Nitrification in freshwater sediments as influenced by insect larvae: quantification by microsensors and fluorescence in situ hybridization.

artículo científico publicado en 2004

Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

artículo científico publicado en 2010

Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink

artículo científico publicado en 2006

Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats

artículo científico publicado en 2010

OXYGEN MICROSENSOR STUDIES ON ZOOXANTHELLATE CLIONAID SPONGES FROM THE COSTA BRAVA, MEDITERRANEAN SEA1

Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs

artículo científico publicado en 2015

Oxygen and pH microprofiles above corroding mild steel covered with a biofilm

Oxygen dynamics and flow patterns of Dysidea avara (Porifera: Demospongiae)

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 87 no. 6, December 2007

Oxygen dynamics and transport in the Mediterranean sponge Aplysina aerophoba

artículo científico publicado en 2008

Oxygen-independent glucose microsensor based on glucose oxidase

Oxygenic and anoxygenic photosynthesis in a microbial mat from an anoxic and sulfidic spring

artículo científico publicado en 2016

Oxygenic photosynthesis as a protection mechanism for cyanobacteria against iron-encrustation in environments with high Fe(2+) concentrations

artículo científico publicado en 2014

Photosynthesis under very high oxygen concentrations in dense microbial mats and biofilms

scholarly article published 31 May 2018

Photosynthesis, Respiration and Exopolymer Calcium-Binding in Biofilm Calcification (Westerhöfer and Deinschwanger Creek, Germany)

article

Phototrophic biofilm activity and dynamics of diurnal Cd cycling in a freshwater stream

artículo científico publicado en 2009

Phylogenetic diversity and activity of aerobic heterotrophic bacteria from a hypersaline oil-polluted microbial mat.

artículo científico publicado en 2006

Physiological adaptation of a nitrate-storing Beggiatoa sp. to diel cycling in a phototrophic hypersaline mat.

artículo científico publicado en 2007

Quantification of the effects of ocean acidification on sediment microbial communities in the environment: the importance of ecosystem approaches

artículo científico publicado en 2016

Rapid Reactivation of Cyanobacterial Photosynthesis and Migration upon Rehydration of Desiccated Marine Microbial Mats

artículo científico publicado en 2015

Rapid recovery of cyanobacterial pigments in desiccated biological soil crusts following addition of water

artículo científico publicado en 2014

Reactive oxygen species affect the potential for mineralization processes in permeable intertidal flats

artículo científico publicado en 2023

Resilience of pore-water chemistry and calcification in photosynthetic zones of calcifying sediments

scholarly article by Raphaela Schoon et al published 21 December 2009 in Limnology and Oceanography

Resistance of Lophelia pertusa to coverage by sediment and petroleum drill cuttings

artículo científico publicado en 2013

Response of Posidonia oceanica seagrass and its epibiont communities to ocean acidification

artículo científico publicado en 2017

Response of the ubiquitous pelagic diatom Thalassiosira weissflogii to darkness and anoxia

artículo científico publicado en 2013

Role of Extracellular Carbonic Anhydrase in Dissolved Inorganic Carbon Uptake in Alkaliphilic Phototrophic Biofilm

scientific article published in 2018

Role of diatoms in the spatial-temporal distribution of intracellular nitrate in intertidal sediment

artículo científico publicado en 2013

Role of nitric oxide in Salmonella typhimurium-mediated cancer cell killing

artículo científico publicado en 2010

Section 8 update: Use of microelectrodes to measure in situ microbial activities in biofilms, sediments, and microbial mats

Shell biofilm-associated nitrous oxide production in marine molluscs: processes, precursors and relative importance.

artículo científico publicado en 2012

Shorter telomeres correlate with an increase in the number of uniparental disomies in patients with chronic lymphocytic leukemia

artículo científico publicado en 2015

Small-Scale Distribution of Interstitial Nitrite in Freshwater Sediment Microcosms: The Role of Nitrate and Oxygen Availability, and Sediment Permeability

scientific article published on 28 March 2002

Spatial distribution of calcification and photosynthesis in the scleractinian coral Galaxea fascicularis

scholarly article by Fuad A. Al-Horani et al published 8 December 2004 in Coral Reefs

Spatial distribution of diatom and cyanobacterial mats in the Dead Sea is determined by response to rapid salinity fluctuations

artículo científico publicado en 2014

Structure and function of natural sulphide-oxidizing microbial mats under dynamic input of light and chemical energy

artículo científico publicado en 2015

Successional development of sulfate-reducing bacterial populations and their activities in an activated sludge immobilized agar gel film

artículo científico publicado en 2002

Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea.

artículo científico publicado en 2014

Sulfide-oxidizing activity and bacterial community structure in a fluidized bed reactor from a zero-discharge mariculture system

artículo científico publicado en 2005

The Ellrott grab: A small, lightweight sediment sampler for collecting undisturbed sandy sediments

artículo científico publicado en 2024

The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation

artículo científico publicado en 2016

The O2, pH and Ca2+ microenvironment of benthic foraminifera in a high CO2 world

artículo científico publicado en 2012

The influence of phototrophic benthic biofilms on Cd, Cu, Ni, and Pb transport in permeable sediments

The response of seagrass (<i>Posidonia oceanica</i>) meadow metabolism to CO<sub>2</sub> levels and hydrodynamic exchange determined with aquatic eddy covariance

The role of nitric-oxide-synthase-derived nitric oxide in multicellular traits of Bacillus subtilis 3610: biofilm formation, swarming, and dispersal

artículo científico publicado en 2011

Thermal stress reduces pocilloporid coral resilience to ocean acidification by impairing control over calcifying fluid chemistry

artículo científico publicado en 2021

Tufa-forming biofilms of German karstwater streams: microorganisms, exopolymers, hydrochemistry and calcification

article

Two-Dimensional Mapping of Arsenic Concentration and Speciation with Diffusive Equilibrium in Thin-Film Gels

artículo científico publicado en 2023

Two-dimensional mapping of photopigment distribution and activity of Chloroflexus-like bacteria in a hypersaline microbial mat.

artículo científico publicado en 2008

Uptake rates of oxygen and sulfide measured with individual Thiomargarita namibiensis cells by using microelectrodes

artículo científico publicado en 2002

Vacuolar respiration of nitrate coupled to energy conservation in filamentous Beggiatoaceae.

artículo científico publicado en 2012

Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus

artículo científico publicado en 2011

VacuolatedBeggiatoa-like filaments from different hypersaline environments form a novel genus

scientific article published in 2012

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