Lista de obras - Angelo Facchiano - Dominio Público Uruguay

3D Modelling of Three Pro-Inflammatory Molecules in Selected Fish Species

artículo científico publicado en 2010

A CD4 homologue in sea bass (Dicentrarchus labrax): molecular characterization and structural analysis

artículo científico publicado en 2008

A New APEH Cluster with Antioxidant Functions in the Antarctic Hemoglobinless Icefish Chionodraco hamatus

artículo científico publicado en 2015

A genomic view of estrogen actions in human breast cancer cells by expression profiling of the hormone-responsive transcriptome

artículo científico publicado en 2004

A novel class of bifunctional acylpeptide hydrolases--potential role in the antioxidant defense systems of the Antarctic fish Trematomus bernacchii

artículo científico publicado en 2013

A theoretical study on predicted protein targets of apple polyphenols and possible mechanisms of chemoprevention in colorectal cancer

artículo científico publicado en 2016

Alteration in the ubiquitin structure and function in the human lens: a possible mechanism of senile cataractogenesis.

artículo científico publicado en 2002

Amino acid propensities for secondary structures are influenced by the protein structural class

artículo científico publicado en 2006

An investigation into the molecular basis of cancer comorbidities in coronavirus infection

scientific article published on 24 September 2020

Analysis of galactosemia-linked mutations of GALT enzyme using a computational biology approach

artículo científico publicado en 2009

Aryl hydrocarbon receptor, a tumor grade‑associated marker of oral cancer, is directly downregulated by polydatin: A pilot study

artículo científico publicado en 2018

Assessment of the conformational features of vasoactive intestinal peptide in solution by limited proteolysis experiments.

artículo científico publicado en 2006

Binding of mycotoxins to proteins involved in neuronal plasticity: a combined in silico/wet investigation

artículo científico publicado en 2017

Biochemical characterization and homology modeling of a purine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus: insights into mechanisms of protein stabilization

artículo científico publicado en 2008

Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics

artículo científico publicado en 2013

Bioinformatics methodologies for coeliac disease and its comorbidities

scientific article published on 16 November 2018

Classification of microbial transglutaminases by evaluation of evolution trees, sequence motifs, secondary structure topology and conservation of potential catalytic residues

scientific article published on 27 December 2018

Clinical and molecular spectra in galactosemic patients from neonatal screening in northeastern Italy: structural and functional characterization of new variations in the galactose-1-phosphate uridyltransferase (GALT) gene.

artículo científico publicado en 2015

Comparative gene expression profiling reveals partially overlapping but distinct genomic actions of different antiestrogens in human breast cancer cells

artículo científico

Comparing the modeled structures of PR-4 proteins from wheat

artículo científico publicado en 2003

Complement C3f serum levels may predict breast cancer risk in women with gross cystic disease of the breast

artículo científico publicado en 2013

Conformational diseases and structure-toxicity relationships: lessons from prion-derived peptides

artículo científico publicado en 2007

Correlation assessment among clinical phenotypes, expression analysis and molecular modeling of 14 novel variations in the human galactose-1-phosphate uridylyltransferase gene ⬇️

artículo científico publicado el 30 de abril de 2012

Critical assessment of side chain conformation prediction in modelling of single point amino acid mutation

artículo científico publicado en 2010

Diversity, molecular characterization and expression of T cell receptor γ in a teleost fish, the sea bass (Dicentrarchus labrax, L).

artículo científico publicado en 2012

Energy-based prediction of amino acid-nucleotide base recognition

artículo científico publicado en 2008

Evaluation of the structural quality of modeled proteins by using globularity criteria

artículo científico publicado en 2007

Experimental Evidence and In Silico Identification of Tryptophan Decarboxylase in Citrus Genus.

artículo científico publicado en 2017

FASMA: a service to format and analyze sequences in multiple alignments

artículo científico publicado en 2007

Functional hypothesis on miraculin' sweetness by a molecular dynamics approach.

artículo científico publicado en 2010

GALT protein database: querying structural and functional features of GALT enzyme.

artículo científico publicado en 2014

Geena 2, improved automated analysis of MALDI/TOF mass spectra

artículo científico publicado en 2016

GeenaR: A Web Tool for Reproducible MALDI-TOF Analysis

scientific article published on 29 March 2021

Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites

artículo científico publicado en 2019

Homology Modeling Studies on Human Galactose-1-phosphate Uridylyltransferase and on Its Galactosemia-Related Mutant Q188R Provide an Explanation of Molecular Effects of the Mutation on Homo- and Heterodimers

artículo científico publicado en 2005

Human Prion Protein Helices: Studying Their Stability by Molecular Dynamics Simulations (SUPPLEMENTARY MATERIAL)

article

Human aryl-hydrocarbon receptor and its interaction with dioxin and physiological ligands investigated by molecular modelling and docking simulations

artículo científico publicado en 2011

Identification of a beta-lactoglobulin lactosylation site.

artículo científico publicado en 1998

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS

artículo científico publicado en 2011

Immunoglobulin T from sea bass (Dicentrarchus labrax L.): molecular characterization, tissue localization and expression after nodavirus infection.

artículo científico publicado en 2017

In silico approach to find chymase inhibitors among biogenic compounds

artículo científico publicado en 2016

Integrating mutation data and structural analysis of the TP53 tumor-suppressor protein

artículo científico publicado en 2002

Interaction of human chymase with ginkgolides, terpene trilactones of Ginkgo biloba investigated by molecular docking simulations

artículo científico publicado en 2016

Interleukin-10 expression by real-time PCR and homology modelling analysis in the European sea bass (Dicentrarchus Labrax L.)

Intestinal T cell responses to gluten peptides are largely heterogeneous: implications for a peptide-based therapy in celiac disease

artículo científico publicado en 2009

Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the discrimination of food-borne microorganisms

artículo científico publicado en 2006

Modeling the 3D structure of wheat subtilisin/chymotrypsin inhibitor (WSCI). Probing the reactive site with two susceptible proteinases by time-course analysis and molecular dynamics simulations

artículo científico publicado en 2006

Modelling of HLA-DQ2 and its interaction with gluten peptides to explain molecular recognition in celiac disease

artículo científico publicado en 2005

Modelling of fish interleukin-1 and its receptor.

artículo científico publicado en 2004

Molecular Docking Simulations on Histone Deacetylases (HDAC)-1 and -2 to Investigate the Flavone Binding

scientific article published on 04 December 2020

Molecular and structural characterisation of a macrophage migration inhibitory factor from sea bass (Dicentrarchus labrax L.).

artículo científico publicado en 2010

Molecular characterisation and structural analysis of an interferon homologue in sea bass (Dicentrarchus labrax L.).

artículo científico publicado en 2008

Molecular characterization, gene structure and antibacterial activity of a g-type lysozyme from the European sea bass (Dicentrarchus labrax L.).

artículo científico publicado en 2014

Molecular cloning, differential expression and 3D structural analysis of the MHC class-II beta chain from sea bass (Dicentrarchus labrax L.).

artículo científico publicado en 2007

Molecular identification of ERalpha-positive breast cancer cells by the expression profile of an intrinsic set of estrogen regulated genes

artículo científico publicado en 2004

Molecular modelling of co-receptor CD8αα and its complex with MHC class I and T-cell receptor in sea bream (Sparus aurata)

scientific article published on 07 April 2008

Molecular modelling of miraculin: Structural analyses and functional hypotheses.

artículo científico publicado en 2007

Molecular properties of glutamate dehydrogenase from the extreme thermophilic archaebacterium Sulfolobus solfataricus

artículo científico publicado en 1995

Mutation spectrum in the French cohort of galactosemic patients and structural simulation of 27 novel missense variations

artículo científico publicado en 2012

NMR and computational data of two novel antimicrobial peptides

artículo científico publicado en 2016

New antimicrobial peptides against foodborne pathogens: From in silico design to experimental evidence.

artículo científico publicado en 2016

New computational strategy to analyze the interactions of ERα and ERβ with different ERE sequences

artículo científico publicado en 2007

PDGFR-alpha inhibits melanoma growth via CXCL10/IP-10: a multi-omics approach

artículo científico publicado en 2016

Performance of Web tools for predicting changes in protein stability caused by mutations

artículo científico publicado en 2021

Polymorphism of the phosphoserine phosphatase gene in Streptococcus thermophilus and its potential use for typing and monitoring of population diversity.

artículo científico publicado en 2016

Pre-Processing MALDI/TOF Mass Spectra by Using Geena 2

artículo científico publicado en 2018

PreSSAPro: a software for the prediction of secondary structure by amino acid properties

artículo científico publicado en 2007

Prediction of the protein structural class by specific peptide frequencies

artículo científico publicado en 2008

Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics

artículo científico publicado en 2015

Primary structure of alpha-globin chains from river buffalo (Bubalus bubalis L.) hemoglobins

scientific article published on 01 February 2001

Probing the modelled structure of wheatwin1 by controlled proteolysis and sequence analysis of unfractionated digestion mixtures

artículo científico publicado en 1999

Proteomic profile in familial breast cancer patients

artículo científico publicado en 2012

Pyrimidine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus--biochemical characterization and homology modeling

artículo científico publicado en 2008

Rapid peptidomic profiling of peritoneal fluid by MALDI-TOF mass spectrometry for the identification of biomarkers of endometriosis.

artículo científico publicado en 2014

Redesigning the reactive site loop of the wheat subtilisin/chymotrypsin inhibitor (WSCI) by site-directed mutagenesis. A protein-protein interaction study by affinity chromatography and molecular modeling

artículo científico publicado en 2009

Role of 'shared epitope' and other citrullination-sites in rheumatoid arthritis and in melanoma

artículo científico publicado en 2017

Simulation of conformational changes occurring when a protein interacts with its receptor

artículo científico publicado en 2007

Standardized sample preparation phases for a quantitative measurement of plasma peptidome profiling by MALDI-TOF.

artículo científico publicado en 2010

Structural and Functional Characterization of Lipoxygenases from Diatoms by Bioinformatics and Modelling Studies

artículo científico publicado en 2024

Structure and Ligands Interactions of Tryptophan Decarboxylase by Molecular Modeling and Docking Simulations

scientific article published on 26 March 2019

T cell receptor beta chain from sea bream (Sparus aurata): molecular cloning, expression and modelling of the complexes with MHC class I.

artículo científico publicado en 2007

The CD8alpha from sea bass (Dicentrarchus labrax L.): Cloning, expression and 3D modelling

artículo científico publicado en 2005

The N-terminal 1-16 peptide derived in vivo from protein seminal vesicle protein IV modulates alpha-thrombin activity: potential clinical implications

artículo científico publicado en 2008

The amino acid sequence of a protein from wheat kernel closely related to proteins involved in the mechanisms of plant defence

article

The application of atmospheric pressure matrix-assisted laser desorption/ionization to the analysis of long-term cryopreserved serum peptidome

artículo científico publicado en 2011

The evolution of a Web resource: The Galactosemia Proteins Database 2.0.

artículo científico publicado en 2017

The fluorescent monomeric protein Kusabira Orange. Pressure effect on its structure and stability.

artículo científico publicado en 2016

The genetic code is not an optimal code in a model taking into account both the biosynthetic relationships between amino acids and their physicochemical properties

scientific article published on 20 September 2018

The misuse of terms in scientific literature

artículo científico publicado en 2010

Theoretical model of the three-dimensional structure of a sugar-binding protein from Pyrococcus horikoshii: structural analysis and sugar-binding simulations

artículo científico

Transamidation of wheat flour inhibits the response to gliadin of intestinal T cells in celiac disease.

artículo científico publicado en 2007

Transglutaminase-mediated polyamination of vasoactive intestinal peptide (VIP) Gln16 residue modulates VIP/PACAP receptor activity

artículo científico publicado en 2002

Uncommon functional properties of the first piscine 26S proteasome from the Antarctic notothenioid Trematomus bernacchii

artículo científico publicado en 2016

Understanding the role of the topology in protein folding by computational inverse folding experiments

artículo científico publicado en 2008

Unusual Antioxidant Properties of 26S Proteasome Isolated from Cold-Adapted Organisms.

artículo científico publicado en 2017

Wheat Subtilisin/Chymotrypsin Inhibitor (WSCI) as a scaffold for novel serine protease inhibitors with a given specificity

artículo científico publicado en 2012

When it comes to homology, bad habits die hard

artículo científico publicado en 2009

Lista de obras de Angelo Facchiano

3D Modelling of Three Pro-Inflammatory Molecules in Selected Fish Species

A CD4 homologue in sea bass (Dicentrarchus labrax): molecular characterization and structural analysis

A New APEH Cluster with Antioxidant Functions in the Antarctic Hemoglobinless Icefish Chionodraco hamatus

A genomic view of estrogen actions in human breast cancer cells by expression profiling of the hormone-responsive transcriptome

A novel class of bifunctional acylpeptide hydrolases--potential role in the antioxidant defense systems of the Antarctic fish Trematomus bernacchii

A theoretical study on predicted protein targets of apple polyphenols and possible mechanisms of chemoprevention in colorectal cancer

Alteration in the ubiquitin structure and function in the human lens: a possible mechanism of senile cataractogenesis.

Amino acid propensities for secondary structures are influenced by the protein structural class

An investigation into the molecular basis of cancer comorbidities in coronavirus infection

Analysis of galactosemia-linked mutations of GALT enzyme using a computational biology approach

Aryl hydrocarbon receptor, a tumor grade‑associated marker of oral cancer, is directly downregulated by polydatin: A pilot study

Assessment of the conformational features of vasoactive intestinal peptide in solution by limited proteolysis experiments.

Binding of mycotoxins to proteins involved in neuronal plasticity: a combined in silico/wet investigation

Biochemical characterization and homology modeling of a purine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus: insights into mechanisms of protein stabilization

Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics

Bioinformatics methodologies for coeliac disease and its comorbidities

Classification of microbial transglutaminases by evaluation of evolution trees, sequence motifs, secondary structure topology and conservation of potential catalytic residues

Clinical and molecular spectra in galactosemic patients from neonatal screening in northeastern Italy: structural and functional characterization of new variations in the galactose-1-phosphate uridyltransferase (GALT) gene.

Comparative gene expression profiling reveals partially overlapping but distinct genomic actions of different antiestrogens in human breast cancer cells

Comparing the modeled structures of PR-4 proteins from wheat

Complement C3f serum levels may predict breast cancer risk in women with gross cystic disease of the breast

Conformational diseases and structure-toxicity relationships: lessons from prion-derived peptides

Correlation assessment among clinical phenotypes, expression analysis and molecular modeling of 14 novel variations in the human galactose-1-phosphate uridylyltransferase gene ⬇️

Critical assessment of side chain conformation prediction in modelling of single point amino acid mutation

Diversity, molecular characterization and expression of T cell receptor γ in a teleost fish, the sea bass (Dicentrarchus labrax, L).

Energy-based prediction of amino acid-nucleotide base recognition

Evaluation of the structural quality of modeled proteins by using globularity criteria

Experimental Evidence and In Silico Identification of Tryptophan Decarboxylase in Citrus Genus.

FASMA: a service to format and analyze sequences in multiple alignments

Functional hypothesis on miraculin' sweetness by a molecular dynamics approach.

GALT protein database: querying structural and functional features of GALT enzyme.

Geena 2, improved automated analysis of MALDI/TOF mass spectra

GeenaR: A Web Tool for Reproducible MALDI-TOF Analysis

Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites

Homology Modeling Studies on Human Galactose-1-phosphate Uridylyltransferase and on Its Galactosemia-Related Mutant Q188R Provide an Explanation of Molecular Effects of the Mutation on Homo- and Heterodimers

Human Prion Protein Helices: Studying Their Stability by Molecular Dynamics Simulations (SUPPLEMENTARY MATERIAL)

Human aryl-hydrocarbon receptor and its interaction with dioxin and physiological ligands investigated by molecular modelling and docking simulations

Identification of a beta-lactoglobulin lactosylation site.

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS

Immunoglobulin T from sea bass (Dicentrarchus labrax L.): molecular characterization, tissue localization and expression after nodavirus infection.

In silico approach to find chymase inhibitors among biogenic compounds

Integrating mutation data and structural analysis of the TP53 tumor-suppressor protein

Interaction of human chymase with ginkgolides, terpene trilactones of Ginkgo biloba investigated by molecular docking simulations

Interleukin-10 expression by real-time PCR and homology modelling analysis in the European sea bass (Dicentrarchus Labrax L.)

Intestinal T cell responses to gluten peptides are largely heterogeneous: implications for a peptide-based therapy in celiac disease

Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the discrimination of food-borne microorganisms

Modeling the 3D structure of wheat subtilisin/chymotrypsin inhibitor (WSCI). Probing the reactive site with two susceptible proteinases by time-course analysis and molecular dynamics simulations

Modelling of HLA-DQ2 and its interaction with gluten peptides to explain molecular recognition in celiac disease

Modelling of fish interleukin-1 and its receptor.

Molecular Docking Simulations on Histone Deacetylases (HDAC)-1 and -2 to Investigate the Flavone Binding

Molecular and structural characterisation of a macrophage migration inhibitory factor from sea bass (Dicentrarchus labrax L.).

Molecular characterisation and structural analysis of an interferon homologue in sea bass (Dicentrarchus labrax L.).

Molecular characterization, gene structure and antibacterial activity of a g-type lysozyme from the European sea bass (Dicentrarchus labrax L.).

Molecular cloning, differential expression and 3D structural analysis of the MHC class-II beta chain from sea bass (Dicentrarchus labrax L.).

Molecular identification of ERalpha-positive breast cancer cells by the expression profile of an intrinsic set of estrogen regulated genes

Molecular modelling of co-receptor CD8αα and its complex with MHC class I and T-cell receptor in sea bream (Sparus aurata)

Molecular modelling of miraculin: Structural analyses and functional hypotheses.

Molecular properties of glutamate dehydrogenase from the extreme thermophilic archaebacterium Sulfolobus solfataricus

Mutation spectrum in the French cohort of galactosemic patients and structural simulation of 27 novel missense variations

NMR and computational data of two novel antimicrobial peptides

New antimicrobial peptides against foodborne pathogens: From in silico design to experimental evidence.

New computational strategy to analyze the interactions of ERα and ERβ with different ERE sequences

PDGFR-alpha inhibits melanoma growth via CXCL10/IP-10: a multi-omics approach

Performance of Web tools for predicting changes in protein stability caused by mutations

Polymorphism of the phosphoserine phosphatase gene in Streptococcus thermophilus and its potential use for typing and monitoring of population diversity.

Pre-Processing MALDI/TOF Mass Spectra by Using Geena 2

PreSSAPro: a software for the prediction of secondary structure by amino acid properties

Prediction of the protein structural class by specific peptide frequencies

Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics

Primary structure of alpha-globin chains from river buffalo (Bubalus bubalis L.) hemoglobins

Probing the modelled structure of wheatwin1 by controlled proteolysis and sequence analysis of unfractionated digestion mixtures

Proteomic profile in familial breast cancer patients

Pyrimidine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus--biochemical characterization and homology modeling

Rapid peptidomic profiling of peritoneal fluid by MALDI-TOF mass spectrometry for the identification of biomarkers of endometriosis.

Redesigning the reactive site loop of the wheat subtilisin/chymotrypsin inhibitor (WSCI) by site-directed mutagenesis. A protein-protein interaction study by affinity chromatography and molecular modeling

Role of 'shared epitope' and other citrullination-sites in rheumatoid arthritis and in melanoma

Simulation of conformational changes occurring when a protein interacts with its receptor

Standardized sample preparation phases for a quantitative measurement of plasma peptidome profiling by MALDI-TOF.

Structural and Functional Characterization of Lipoxygenases from Diatoms by Bioinformatics and Modelling Studies