Lista de obras - Sébastien Duplessis - Dominio Público Uruguay

12 Rust Fungi: Achievements and Future Challenges on Genomics and Host–Parasite Interactions

article

454-pyrosequencing of Coffea arabica leaves infected by the rust fungus Hemileia vastatrix reveals in planta-expressed pathogen-secreted proteins and plant functions in a late compatible plant-rust interaction.

artículo científico publicado en 2011

Two stripe rust effectors impair wheat resistance by suppressing import of host Fe–S protein into chloroplasts

artículo científico publicado en 2021

A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors inMelampsora larici-populina(Poplar Leaf Rust)

article

A Remarkable Expansion of Oligopeptide Transporter Genes in Rust Fungi (Pucciniales) Suggests a Specialization in Nutrient Acquisition for Obligate Biotrophy

artículo científico publicado en 2023

A point mutation and large deletion at the candidate avirulence locus AvrMlp7 in the poplar rust fungus correlate with poplar RMlp7 resistance breakdown

artículo científico publicado en 2021

A rust fungal effector binds plant DNA and modulates transcription ⬇️

artículo científico publicado en 2018

Advances in understanding obligate biotrophy in rust fungi

scientific article published on 05 February 2019

Advancing Knowledge on Biology of Rust Fungi Through Genomics

article by Sébastien Duplessis et al published 2014 in Advances in Botanical Research

Analysis of expressed sequence tags from the ectomycorrhizal basidiomycetes Laccaria bicolor and Pisolithus microcarpus

article

Biotrophic Fungi (Powdery Mildews, Rusts, and Smuts)

article

Candidate Effector Proteins of the Rust Pathogen Melampsora larici-populina Target Diverse Plant Cell Compartments.

artículo científico publicado en 2015

Caractérisation par ingénierie génomique des profils d'expression génique de Pisolithus tinctorius et d'Eucalyptus globulus au cours du développement de la symbiose ectomycorhizienne

Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

artículo científico publicado en 2019

Computational Methods for Predicting Effectors in Rust Pathogens

artículo científico publicado en 2017

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies

artículo científico publicado en 2015

Developmental cross talking in the ectomycorrhizal symbiosis: signals and communication genes

article

Editorial: Genomics Research on Non-model Plant Pathogens: Delivering Novel Insights into Rust Fungus Biology

artículo científico

Effector proteins of rust fungi

artículo científico publicado en 2014

Effector-Mining in the Poplar Rust Fungus Melampsora larici-populina Secretome

artículo científico publicado en 2015

Elevated Ozone Concentration and Nitrogen Addition Increase Poplar Rust Severity by Shifting the Phyllosphere Microbial Community

artículo científico publicado en 2022

Expression profiling of genes involved in the biotrophic colonisation of Coffea arabica leaves by Hemileia vastatrix

article

Forest tree genomics: 10 achievements from the past 10 years and future prospects

Gene expression analysis of Populus deltoides roots subjected to copper stress

article

Gene expression patterns of trembling aspen trees following long-term exposure to interacting elevated CO2 and tropospheric O3

article

Genome analysis of poplar LRR-RLP gene clusters reveals RISP, a defense-related gene coding a candidate endogenous peptide elicitor

artículo científico publicado en 2014

Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar

artículo científico publicado en 2011

Genome-wide identification of NBS resistance genes in Populus trichocarpa

artículo científico publicado en 2008

Genome-wide patterns of segregation and linkage disequilibrium: the construction of a linkage genetic map of the poplar rust fungus Melampsora larici-populina

artículo científico publicado en 2014

Genomic Patterns of Positive Selection at the Origin of Rust Fungi

artículo científico publicado en 2015

Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies.

artículo científico publicado en 2016

Identification of symbiosis-regulated genes in Eucalyptus globulus-Pisolithus tinctorius ectomycorrhiza by differential hybridization of arrayed cDNAs.

artículo científico publicado en 2001

Infection assays in Arabidopsis reveal candidate effectors from the poplar rust fungus that promote susceptibility to bacteria and oomycete pathogens

artículo científico publicado en 2016

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

artículo científico publicado en 2012

Isolation and Characterization of Differentially Expressed Genes in the Mycelium and Fruit Body of Tuber borchii.

artículo científico publicado en 2002

Isolation and characterization of differentially expressed genes in the mycelium and fruit body of Tuber borchii

artículo científico publicado en 2002

Isolation of differentially expressed genes during interactions between tomato cells and a protective or a non-protective strain of Fusarium oxysporum

article

Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation

artículo científico publicado en 2010

Living in harmony in the wood underground: ectomycorrhizal genomics

artículo científico publicado en 2007

Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi

scientific article published in 2023

Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy

artículo científico publicado en 2011

Mining gene expression data with pattern structures in formal concept analysis

article

Mitogen-activated protein kinase signaling in plant-interacting fungi: distinct messages from conserved messengers

artículo científico

More complexity in the mycorrhizal world.

artículo científico publicado en 2006

Oak genome reveals facets of long lifespan

scientific article published on 18 June 2018

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

artículo científico publicado en 2011

On the current status of Phakopsora pachyrhizi genome sequencing

artículo científico publicado en 2014

Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix with an emphasis on early stages of infection

artículo científico publicado en 2014

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors

artículo científico publicado en 2014

Photosynthetic and respiratory changes in leaves of poplar elicited by rust infection

artículo científico publicado en 2009

Phylogenetics and Phylogenomics of Rust Fungi

artículo científico publicado en 2017

Poplar and Pathogen Interactions: Insights fromPopulusGenome-Wide Analyses of Resistance and Defense Gene Families and Gene Expression Profiling

article

Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense

artículo científico publicado en 2004

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

artículo científico publicado en 2010

RNA silencing in the model mycorrhizal fungus Laccaria bicolor: gene knock-down of nitrate reductase results in inhibition of symbiosis with Populus

artículo científico publicado en 2009

RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

artículo científico publicado en 2012

Rust Effectors

article

Rust fungal effectors mimic host transit peptides to translocate into chloroplasts

artículo científico publicado en 2015

Secretomic climax in plant-fungal interactions

article

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus

artículo científico publicado en 2015

Show me the way: rust effector targets in heterologous plant systems

artículo científico publicado en 2018

T-DNA insertion, plasmid rescue and integration analysis in the model mycorrhizal fungus Laccaria bicolor

artículo científico publicado en 2008

T-DNA transfer from Agrobacterium tumefaciens to the ectomycorrhizal fungus Pisolithus microcarpus.

artículo científico publicado en 2005

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

artículo científico publicado en 2006

The Poplar Rust-Induced Secreted Protein (RISP) Inhibits the Growth of the Leaf Rust Pathogen Melampsora larici-populina and Triggers Cell Culture Alkalinisation.

artículo científico publicado en 2016

The application of genetic approaches for investigations of mycorrhizal symbioses

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

artículo científico publicado en 2008

The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1.

artículo científico publicado en 2014

The poplar-poplar rust interaction: insights from genomics and transcriptomics

artículo científico publicado en 2011

The rust fungus Melampsora larici-populina expresses a conserved genetic program and distinct sets of secreted protein genes during infection of its two host plants, larch and poplar.

artículo científico publicado en 2018

Toward the Discovery of Itemsets with Significant Variations in Gene Expression Matrices

article

Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus

article

Transcript profiling of poplar leaves upon infection with compatible and incompatible strains of the foliar rust Melampsora larici-populina

artículo científico publicado en 2007

Transcript profiling reveals novel marker genes involved in fruiting body formation in Tuber borchii

artículo científico publicado en 2005

Transcriptome Analysis of Apple Leaves Infected by the Rust Fungus Gymnosporangium yamadae at Two Sporulation Stages

artículo científico publicado en 2020

Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes

artículo científico publicado en 2013

Two FCA-Based Methods for Mining Gene Expression Data

article

Using Formal Concept Analysis for the Extraction of Groups of Co-expressed Genes

article

Validation of Melampsora larici-populina reference genes for in planta RT-quantitative PCR expression profiling during time-course infection of poplar leaves

article

Validation of RT-qPCR reference genes for in planta expression studies in Hemileia vastatrix, the causal agent of coffee leaf rust

artículo científico publicado en 2011

Lista de obras de Sébastien Duplessis

12 Rust Fungi: Achievements and Future Challenges on Genomics and Host–Parasite Interactions

454-pyrosequencing of Coffea arabica leaves infected by the rust fungus Hemileia vastatrix reveals in planta-expressed pathogen-secreted proteins and plant functions in a late compatible plant-rust interaction.

<b>Two stripe rust effectors impair wheat resistance by suppressing import of host Fe</b>–<b>S protein into chloroplasts</b>

A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors inMelampsora larici-populina(Poplar Leaf Rust)

A Remarkable Expansion of Oligopeptide Transporter Genes in Rust Fungi (Pucciniales) Suggests a Specialization in Nutrient Acquisition for Obligate Biotrophy

A point mutation and large deletion at the candidate avirulence locus <i>AvrMlp7</i> in the poplar rust fungus correlate with poplar RMlp7 resistance breakdown

A rust fungal effector binds plant DNA and modulates transcription ⬇️

Advances in understanding obligate biotrophy in rust fungi

Advancing Knowledge on Biology of Rust Fungi Through Genomics

Analysis of expressed sequence tags from the ectomycorrhizal basidiomycetes Laccaria bicolor and Pisolithus microcarpus

Biotrophic Fungi (Powdery Mildews, Rusts, and Smuts)

Candidate Effector Proteins of the Rust Pathogen Melampsora larici-populina Target Diverse Plant Cell Compartments.

Caractérisation par ingénierie génomique des profils d'expression génique de Pisolithus tinctorius et d'Eucalyptus globulus au cours du développement de la symbiose ectomycorhizienne

Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

Computational Methods for Predicting Effectors in Rust Pathogens

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies

Developmental cross talking in the ectomycorrhizal symbiosis: signals and communication genes

Editorial: Genomics Research on Non-model Plant Pathogens: Delivering Novel Insights into Rust Fungus Biology

Effector proteins of rust fungi

Effector-Mining in the Poplar Rust Fungus Melampsora larici-populina Secretome

Elevated Ozone Concentration and Nitrogen Addition Increase Poplar Rust Severity by Shifting the Phyllosphere Microbial Community

Expression profiling of genes involved in the biotrophic colonisation of Coffea arabica leaves by Hemileia vastatrix

Forest tree genomics: 10 achievements from the past 10 years and future prospects

Gene expression analysis of Populus deltoides roots subjected to copper stress

Gene expression patterns of trembling aspen trees following long-term exposure to interacting elevated CO2 and tropospheric O3

Genome analysis of poplar LRR-RLP gene clusters reveals RISP, a defense-related gene coding a candidate endogenous peptide elicitor

Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar

Genome-wide identification of NBS resistance genes in Populus trichocarpa

Genome-wide patterns of segregation and linkage disequilibrium: the construction of a linkage genetic map of the poplar rust fungus Melampsora larici-populina

Genomic Patterns of Positive Selection at the Origin of Rust Fungi

Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies.

Identification of symbiosis-regulated genes in Eucalyptus globulus-Pisolithus tinctorius ectomycorrhiza by differential hybridization of arrayed cDNAs.

Infection assays in Arabidopsis reveal candidate effectors from the poplar rust fungus that promote susceptibility to bacteria and oomycete pathogens

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

Isolation and Characterization of Differentially Expressed Genes in the Mycelium and Fruit Body of Tuber borchii.

Isolation and characterization of differentially expressed genes in the mycelium and fruit body of Tuber borchii

Isolation of differentially expressed genes during interactions between tomato cells and a protective or a non-protective strain of Fusarium oxysporum

Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation

Living in harmony in the wood underground: ectomycorrhizal genomics

Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi

Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy

Mining gene expression data with pattern structures in formal concept analysis

Mitogen-activated protein kinase signaling in plant-interacting fungi: distinct messages from conserved messengers

More complexity in the mycorrhizal world.

Oak genome reveals facets of long lifespan

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

On the current status of Phakopsora pachyrhizi genome sequencing

Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix with an emphasis on early stages of infection

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors

Photosynthetic and respiratory changes in leaves of poplar elicited by rust infection

Phylogenetics and Phylogenomics of Rust Fungi

Poplar and Pathogen Interactions: Insights fromPopulusGenome-Wide Analyses of Resistance and Defense Gene Families and Gene Expression Profiling

Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

RNA silencing in the model mycorrhizal fungus Laccaria bicolor: gene knock-down of nitrate reductase results in inhibition of symbiosis with Populus

RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

Rust Effectors

Rust fungal effectors mimic host transit peptides to translocate into chloroplasts

Secretomic climax in plant-fungal interactions

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus

Show me the way: rust effector targets in heterologous plant systems

T-DNA insertion, plasmid rescue and integration analysis in the model mycorrhizal fungus Laccaria bicolor

T-DNA transfer from Agrobacterium tumefaciens to the ectomycorrhizal fungus Pisolithus microcarpus.

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

The Poplar Rust-Induced Secreted Protein (RISP) Inhibits the Growth of the Leaf Rust Pathogen Melampsora larici-populina and Triggers Cell Culture Alkalinisation.

The application of genetic approaches for investigations of mycorrhizal symbioses

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1.

The poplar-poplar rust interaction: insights from genomics and transcriptomics

The rust fungus Melampsora larici-populina expresses a conserved genetic program and distinct sets of secreted protein genes during infection of its two host plants, larch and poplar.

Toward the Discovery of Itemsets with Significant Variations in Gene Expression Matrices

Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus

Transcript profiling of poplar leaves upon infection with compatible and incompatible strains of the foliar rust Melampsora larici-populina

Transcript profiling reveals novel marker genes involved in fruiting body formation in Tuber borchii

Transcriptome Analysis of Apple Leaves Infected by the Rust Fungus Gymnosporangium yamadae at Two Sporulation Stages

Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes

Two FCA-Based Methods for Mining Gene Expression Data

Using Formal Concept Analysis for the Extraction of Groups of Co-expressed Genes

Validation of Melampsora larici-populina reference genes for in planta RT-quantitative PCR expression profiling during time-course infection of poplar leaves