Lista de obras - Ivan Erill - Dominio Público Uruguay

A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data

artículo científico publicado en 2016

A Novel Genus of Actinobacterial Tectiviridae

scientific article published on 07 December 2019

A SiC microdevice for the minimally invasive monitoring of ischemia in living tissues

artículo científico publicado en 2006

A green nonsulfur bacterium, Dehalococcoides ethenogenes, with the LexA binding sequence found in gram-positive organisms

artículo científico publicado en 2002

A rapid and reliable means of assessing hepatic steatosis in vivo via electrical bioimpedance

artículo científico publicado en 2009

A reexamination of information theory-based methods for DNA-binding site identification

artículo científico publicado en 2009

Aeons of distress: an evolutionary perspective on the bacterial SOS response.

artículo científico publicado en 2007

An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria

artículo científico publicado en 2015

Analysis of the SOS response of Vibrio and other bacteria with multiple chromosomes

artículo científico publicado en 2012

Assessment of transfer methods for comparative genomics of regulatory networks in bacteria

artículo científico publicado en 2016

Bacillus cereus Group Bacteriophage Flapjack Genome Sequence

artículo científico publicado en 2017

BioWord: a sequence manipulation suite for Microsoft Word

artículo científico publicado en 2012

Biochemical analysis and optimization of inhibition and adsorption phenomena in glass–silicon PCR-chips

Characterization of the SOS meta-regulon in the human gut microbiome

artículo científico publicado en 2014

Cohabitation of two different lexA regulons in Pseudomonas putida.

artículo científico publicado en 2007

CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria

artículo científico publicado en 2014

Comparative Analysis of Ralstonia solanacearum Methylomes

artículo científico publicado en 2017

Comparative genomics of the DNA damage-inducible network in the Patescibacteria.

artículo científico publicado en 2017

Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba.

artículo científico publicado en 2015

Complete Genome Sequence of Streptomyces Bacteriophage Abt2graduatex2.

artículo científico publicado en 2018

Complete Genome Sequence of the Streptomyces Phage Nanodon

artículo científico publicado en 2016

Complete Genome Sequence of the Streptomyces-Specific Bacteriophage BRock

scientific article published on 27 August 2020

Complete Genome Sequences of HonestAbe, Anthony, and Taffo16, Three Cluster C Bacillus cereus Group Bacteriophages

artículo científico publicado en 2018

Complete Genome Sequences of Six BI Cluster Streptomyces Bacteriophages, HotFries, Moozy, Rainydai, RavenPuff, Scap1, and SenditCS

scientific article published on 27 September 2018

Complete Genome Sequences of Three phi29-Like Bacillus cereus Group Podoviridae.

artículo científico publicado en 2017

Conceptualization of the Holobiont Paradigm as It Pertains to Corals

artículo científico publicado en 2020

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO)

artículo científico publicado en 2021

Development of a CMOS-compatible PCR chip: comparison of design and system strategies

article

Diagnostic yield of targeted next generation sequencing in various cancer types: an information-theoretic approach

artículo científico publicado en 2015

Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics

artículo científico publicado en 2004

Dispersal and regulation of an adaptive mutagenesis cassette in the bacteria domain

artículo científico publicado en 2006

ECO, the Evidence & Conclusion Ontology: community standard for evidence information

artículo científico publicado en 2019

Enhanced copper-resistance gene repertoire in Alteromonas macleodii strains isolated from copper-treated marine coatings

artículo científico publicado en 2021

Erratum for Erill and Caruso, Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba

artículo científico publicado en 2015

Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal

artículo científico publicado en 2015

Exploration into the origins and mobilization of di-hydrofolate reductase genes and the emergence of clinical resistance to trimethoprim

scientific article published on 24 September 2020

Expression of canonical SOS genes is not under LexA repression in Bdellovibrio bacteriovorus

artículo científico publicado en 2005

Flexible comparative genomics of prokaryotic transcriptional regulatory networks

artículo científico publicado en 2020

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF

artículo científico publicado en 2016

Genome Sequence of Bacillus cereus Group Phage SalinJah.

artículo científico publicado en 2016

Genome Sequences of Two Bacillus cereus Group Bacteriophages, Eyuki and AvesoBmore

artículo científico publicado en 2015

Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon

artículo científico publicado en 2013

Genomic characterization and comparison of seven Myoviridae bacteriophage infecting Bacillus thuringiensis

artículo científico publicado en 2016

Identification and characterization of VpsR and VpsT binding sites in Vibrio cholerae

artículo científico publicado en 2015

Identification of the Acidobacterium capsulatum LexA box reveals a lateral acquisition of the Alphaproteobacteria lexA gene

artículo científico publicado en 2006

In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon

artículo científico publicado en 2003

In vivo detection of liver steatosis in rats based on impedance spectroscopy

artículo científico publicado en 2007

Induction of the SOS response by bacteriophage lytic development in Salmonella enterica

artículo científico publicado en 2006

Inference of self-regulated transcriptional networks by comparative genomics

artículo científico publicado en 2012

Informational requirements for transcriptional regulation

artículo científico publicado en 2014

Manufacturing and full characterization of silicon carbide-based multi-sensor micro-probes for biomedical applications

scholarly article by Gemma Gabriel et al published March 2007 in Microelectronics Journal

Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes

artículo científico publicado en 2021

Origin of the Mobile Di-Hydro-Pteroate Synthase Gene Determining Sulfonamide Resistance in Clinical Isolates

article

Parametric bootstrapping for biological sequence motifs

artículo científico publicado en 2016

Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons.

artículo científico publicado en 2011

Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases

artículo científico publicado en 2020

Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases

scholarly article published 5 October 2019

Real-Time Direct Measurement of Human Liver Allograft Temperature from Recovery to Transplantation

artículo científico publicado en 2006

Reconstruction of the evolutionary history of the LexA-binding sequence.

artículo científico publicado en 2004

Relative codon adaptation: a generic codon bias index for prediction of gene expression

artículo científico publicado en 2010

The SOS response controls integron recombination.

artículo científico publicado en 2009

The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response

artículo científico publicado en 2016

Widespread distribution of a lexA-regulated DNA damage-inducible multiple gene cassette in the Proteobacteria phylum.

artículo científico publicado en 2004

scnRCA: a novel method to detect consistent patterns of translational selection in mutationally-biased genomes

artículo científico publicado en 2013

xFITOM: a generic GUI tool to search for transcription factor binding sites

artículo científico publicado en 2010

Lista de obras de Ivan Erill

A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data

A Novel Genus of Actinobacterial Tectiviridae

A SiC microdevice for the minimally invasive monitoring of ischemia in living tissues

A green nonsulfur bacterium, Dehalococcoides ethenogenes, with the LexA binding sequence found in gram-positive organisms

A rapid and reliable means of assessing hepatic steatosis in vivo via electrical bioimpedance

A reexamination of information theory-based methods for DNA-binding site identification

Aeons of distress: an evolutionary perspective on the bacterial SOS response.

An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria

Analysis of the SOS response of Vibrio and other bacteria with multiple chromosomes

Assessment of transfer methods for comparative genomics of regulatory networks in bacteria

Bacillus cereus Group Bacteriophage Flapjack Genome Sequence

BioWord: a sequence manipulation suite for Microsoft Word

Biochemical analysis and optimization of inhibition and adsorption phenomena in glass–silicon PCR-chips

Characterization of the SOS meta-regulon in the human gut microbiome

Cohabitation of two different lexA regulons in Pseudomonas putida.

CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria

Comparative Analysis of Ralstonia solanacearum Methylomes

Comparative genomics of the DNA damage-inducible network in the Patescibacteria.

Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba.

Complete Genome Sequence of Streptomyces Bacteriophage Abt2graduatex2.

Complete Genome Sequence of the Streptomyces Phage Nanodon

Complete Genome Sequence of the Streptomyces-Specific Bacteriophage BRock

Complete Genome Sequences of HonestAbe, Anthony, and Taffo16, Three Cluster C Bacillus cereus Group Bacteriophages

Complete Genome Sequences of Six BI Cluster Streptomyces Bacteriophages, HotFries, Moozy, Rainydai, RavenPuff, Scap1, and SenditCS

Complete Genome Sequences of Three phi29-Like Bacillus cereus Group Podoviridae.

Conceptualization of the Holobiont Paradigm as It Pertains to Corals

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO)

Development of a CMOS-compatible PCR chip: comparison of design and system strategies

Diagnostic yield of targeted next generation sequencing in various cancer types: an information-theoretic approach

Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics

Dispersal and regulation of an adaptive mutagenesis cassette in the bacteria domain

ECO, the Evidence & Conclusion Ontology: community standard for evidence information

Enhanced copper-resistance gene repertoire in Alteromonas macleodii strains isolated from copper-treated marine coatings

Erratum for Erill and Caruso, Complete Genome Sequence of Bacillus cereus Group Phage TsarBomba

Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal

Exploration into the origins and mobilization of di-hydrofolate reductase genes and the emergence of clinical resistance to trimethoprim

Expression of canonical SOS genes is not under LexA repression in Bdellovibrio bacteriovorus

Flexible comparative genomics of prokaryotic transcriptional regulatory networks

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF

Genome Sequence of Bacillus cereus Group Phage SalinJah.

Genome Sequences of Two Bacillus cereus Group Bacteriophages, Eyuki and AvesoBmore

Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon

Genomic characterization and comparison of seven Myoviridae bacteriophage infecting Bacillus thuringiensis

Identification and characterization of VpsR and VpsT binding sites in Vibrio cholerae

Identification of the Acidobacterium capsulatum LexA box reveals a lateral acquisition of the Alphaproteobacteria lexA gene

In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon

In vivo detection of liver steatosis in rats based on impedance spectroscopy

Induction of the SOS response by bacteriophage lytic development in Salmonella enterica

Inference of self-regulated transcriptional networks by comparative genomics

Informational requirements for transcriptional regulation

Manufacturing and full characterization of silicon carbide-based multi-sensor micro-probes for biomedical applications

Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes

Origin of the Mobile Di-Hydro-Pteroate Synthase Gene Determining Sulfonamide Resistance in Clinical Isolates

Parametric bootstrapping for biological sequence motifs

Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons.

Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases

Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases

Real-Time Direct Measurement of Human Liver Allograft Temperature from Recovery to Transplantation

Reconstruction of the evolutionary history of the LexA-binding sequence.

Relative codon adaptation: a generic codon bias index for prediction of gene expression

The SOS response controls integron recombination.

The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response

Widespread distribution of a lexA-regulated DNA damage-inducible multiple gene cassette in the Proteobacteria phylum.

scnRCA: a novel method to detect consistent patterns of translational selection in mutationally-biased genomes

xFITOM: a generic GUI tool to search for transcription factor binding sites