Lista de obras - Ana T. Freitas - Dominio Público Uruguay

A novel resistance mechanism to triclosan that suggests horizontal gene transfer and demonstrates a potential selective pressure for reduced biocide susceptibility in clinical strains of Staphylococcus aureus

artículo científico publicado en 2012

A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks

artículo científico publicado en 2009

Advancing Eucalyptus genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries

artículo científico publicado en 2011

An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance

artículo científico publicado en 2008

An efficient algorithm for the identification of structured motifs in DNA promoter sequences

artículo científico publicado en 2006

BioSurfDB: knowledge and algorithms to support biosurfactants and biodegradation studies

artículo científico publicado en 2015

Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near-equatorial biomes have higher abundance of genes with potential for bioremediation.

artículo científico publicado en 2017

CSA: an efficient algorithm to improve circular DNA multiple alignment

artículo científico publicado en 2009

Combination of measures distinguishes pre-miRNAs from other stem-loops in the genome of the newly sequenced Anopheles darlingi

artículo científico publicado en 2010

Current tools for the identification of miRNA genes and their targets.

artículo científico publicado en 2009

Efficient alignment of pyrosequencing reads for re-sequencing applications

artículo científico publicado en 2011

Empirical assessment of sequencing errors for high throughput pyrosequencing data.

artículo científico publicado en 2013

Enrichment analysis applied to disease prognosis

artículo científico publicado en 2013

Entropic Profiler - detection of conservation in genomes using information theory

artículo científico publicado en 2009

Evaluation of reduced susceptibility to quaternary ammonium compounds and bisbiguanides in clinical isolates and laboratory-generated mutants of Staphylococcus aureus

artículo científico publicado en 2013

MUSA: a parameter free algorithm for the identification of biologically significant motifs.

artículo científico publicado en 2006

Metagenome enrichment approach used for selection of oil-degrading bacteria consortia for drill cutting residue bioremediation.

artículo científico publicado en 2018

NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language

NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language.

artículo científico publicado en 2019

Navigating the unexplored seascape of pre-miRNA candidates in single-genome approaches

artículo científico publicado en 2012

Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae.

artículo científico publicado en 2011

Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism

Quantitative modeling of the Saccharomyces cerevisiae FLR1 regulatory network using an S-system formalism

artículo científico publicado en 2011

Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches

artículo científico publicado en 2010

Semantic characterization of hypertrophic cardiomyopathy disease

Temporal logic patterns for querying dynamic models of cellular interaction networks

artículo científico publicado en 2008

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae

artículo científico publicado en 2006

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae ⬇️

artículo científico

The semantic web in translational medicine: current applications and future directions

artículo científico publicado en 2015

The use of machine learning methodologies to analyse antibiotic and biocide susceptibility in Staphylococcus aureus.

artículo científico publicado en 2013

Toward a Translational Medicine Approach for Hypertrophic Cardiomyopathy

Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients

artículo científico publicado en 2018

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

artículo científico publicado en 2008

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface

artículo científico publicado en 2010

slaMEM: efficient retrieval of maximal exact matches using a sampled LCP array.

artículo científico publicado en 2013

Lista de obras de Ana T. Freitas

A novel resistance mechanism to triclosan that suggests horizontal gene transfer and demonstrates a potential selective pressure for reduced biocide susceptibility in clinical strains of Staphylococcus aureus

A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks

Advancing Eucalyptus genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries

An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance

An efficient algorithm for the identification of structured motifs in DNA promoter sequences

BioSurfDB: knowledge and algorithms to support biosurfactants and biodegradation studies

Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near-equatorial biomes have higher abundance of genes with potential for bioremediation.

CSA: an efficient algorithm to improve circular DNA multiple alignment

Combination of measures distinguishes pre-miRNAs from other stem-loops in the genome of the newly sequenced Anopheles darlingi

Current tools for the identification of miRNA genes and their targets.

Efficient alignment of pyrosequencing reads for re-sequencing applications

Empirical assessment of sequencing errors for high throughput pyrosequencing data.

Enrichment analysis applied to disease prognosis

Entropic Profiler - detection of conservation in genomes using information theory

Evaluation of reduced susceptibility to quaternary ammonium compounds and bisbiguanides in clinical isolates and laboratory-generated mutants of Staphylococcus aureus

MUSA: a parameter free algorithm for the identification of biologically significant motifs.

Metagenome enrichment approach used for selection of oil-degrading bacteria consortia for drill cutting residue bioremediation.

NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language

NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language.

Navigating the unexplored seascape of pre-miRNA candidates in single-genome approaches

Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae.

Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism

Quantitative modeling of the Saccharomyces cerevisiae FLR1 regulatory network using an S-system formalism

Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches

Semantic characterization of hypertrophic cardiomyopathy disease

Temporal logic patterns for querying dynamic models of cellular interaction networks

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae ⬇️

The semantic web in translational medicine: current applications and future directions

The use of machine learning methodologies to analyse antibiotic and biocide susceptibility in Staphylococcus aureus.

Toward a Translational Medicine Approach for Hypertrophic Cardiomyopathy

Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface

slaMEM: efficient retrieval of maximal exact matches using a sampled LCP array.