Lista de obras - Rosalind J Allen - Dominio Público Uruguay

A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining

artículo científico publicado en 2015

A multipurpose modular system for high-resolution microscopy at high hydrostatic pressure.

artículo científico publicado en 2010

Antibiotic resistance: a physicist's view ⬇️

scientific article published on 11 August 2016

Automatic, optimized interface placement in forward flux sampling simulations.

artículo científico publicado en 2013

C12E2Reverse Micelle: A Molecular Dynamics Study

Calcium Sensitive Fluorescent Dyes Fluo-4 and Fura Red under Pressure: Behaviour of Fluorescence and Buffer Properties under Hydrostatic Pressures up to 200 MPa

artículo científico publicado en 2016

Challenges in microbial ecology: building predictive understanding of community function and dynamics ⬇️

artículo científico

Community history affects the predictability of microbial ecosystem development.

artículo científico publicado en 2013

Competition between primary nucleation and autocatalysis in amyloid fibril self-assembly.

artículo científico publicado en 2015

Competition for space during bacterial colonization of a surface

artículo científico publicado en 2015

Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling

artículo científico publicado en 2007

Computing the local pressure in molecular dynamics simulations

artículo científico publicado en 2012

Continuum Theory of Phase Separation Kinetics for Active Brownian Particles

scientific article published in Physical Review Letters

DNA looping provides stability and robustness to the bacteriophage lambda switch

scholarly article

Density functional approach to the effective interaction between charges within dielectric cavities

Dynamical Phase Transition in a Model for Evolution with Migration

artículo científico publicado en 2010

Effects of macromolecular crowding on genetic networks

artículo científico publicado en 2011

Electric field-controlled water permeation coupled to ion transport through a nanopore

artículo científico publicado en 2004

Electrostatic interactions of charges and dipoles near a polarizable membrane

Electrostatic potential inside ionic solutions confined by dielectrics: a variational approach

Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch

artículo científico publicado en 2008

Exact solution of a model DNA-inversion genetic switch with orientational control.

artículo científico publicado en 2008

Forward flux sampling for rare event simulations

scientific article published on 26 October 2009

Forward flux sampling-type schemes for simulating rare events: Efficiency analysis

article

Genes required for growth at high hydrostatic pressure in Escherichia coli K-12 identified by genome-wide screening.

artículo científico publicado en 2013

Growth-dependent drug susceptibility can prevent or enhance spatial expansion of a bacterial population

artículo científico publicado en 2019

Homogeneous nucleation under shear in a two-dimensional Ising model: cluster growth, coalescence, and breakup

artículo científico publicado en 2008

Inherent Variability in the Kinetics of Autocatalytic Protein Self-Assembly ⬇️

artículo científico publicado en 2014

Intermittent Permeation of Cylindrical Nanopores by Water

artículo científico publicado en 2002

Kinetic models of ion transport through a nanopore.

artículo científico publicado en 2004

Lower glycolysis carries a higher flux than any biochemically possible alternative ⬇️

artículo científico publicado en 2015

Malliavin Weight Sampling: A Practical Guide

Malliavin weight sampling for computing sensitivity coefficients in Brownian dynamics simulations.

artículo científico publicado en 2012

Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers

artículo científico publicado en 2013

Microbial population dynamics and evolution: a statistical physicist's guide

article

Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles

artículo científico publicado en 2012

Molecular dynamics investigation of water permeation through nanopores

article

Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells ⬇️

artículo científico publicado el 20 de agosto de 2012

Non-equilibrium dynamics of an active colloidal "chucker".

artículo científico publicado en 2010

Non-stationary forward flux sampling

artículo científico publicado en 2012

Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates.

artículo científico publicado en 2012

Osmosis in a minimal model system

artículo científico publicado en 2012

Permeation of nanopores by water: the effects of channel polarization

Phase behaviour of active Brownian particles: the role of dimensionality

artículo científico publicado en 2014

Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications

artículo científico publicado en 2020

Reaction coordinates for the flipping of genetic switches

artículo científico publicado en 2008

Resource spectrum engineering by specialist species can shift the specialist-generalist balance

artículo científico publicado en 2019

Role of Multicellular Aggregates in Biofilm Formation

artículo científico publicado en 2016

Sampling Rare Switching Events in Biochemical Networks

artículo científico publicado en 2005

Scalar φ4 field theory for active-particle phase separation

scientific article published in Nature Communications

Sedimentation equilibria of colloidal hard rod dispersions

Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates. ⬇️

artículo científico publicado en 2016

Simulating rare events in equilibrium or nonequilibrium stochastic systems.

artículo científico publicado en 2006

Speed of invasion of an expanding population by a horizontally transmitted trait.

artículo científico publicado en 2013

Stability of β-lactam antibiotics in bacterial growth media

scientific article published on 20 July 2020

Statistical physics of a model binary genetic switch with linear feedback

artículo científico publicado en 2009

Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting.

artículo científico publicado en 2012

Switching and growth for microbial populations in catastrophic responsive environments

artículo científico publicado en 2010

The Pseudomonas aeruginosa PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms.

artículo científico publicado en 2017

The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies.

artículo científico publicado en 2014

Lista de obras de Rosalind J Allen

A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining

A multipurpose modular system for high-resolution microscopy at high hydrostatic pressure.

Antibiotic resistance: a physicist's view ⬇️

Automatic, optimized interface placement in forward flux sampling simulations.

C12E2Reverse Micelle: A Molecular Dynamics Study

Calcium Sensitive Fluorescent Dyes Fluo-4 and Fura Red under Pressure: Behaviour of Fluorescence and Buffer Properties under Hydrostatic Pressures up to 200 MPa

Challenges in microbial ecology: building predictive understanding of community function and dynamics ⬇️

Community history affects the predictability of microbial ecosystem development.

Competition between primary nucleation and autocatalysis in amyloid fibril self-assembly.

Competition for space during bacterial colonization of a surface

Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling

Computing the local pressure in molecular dynamics simulations

Continuum Theory of Phase Separation Kinetics for Active Brownian Particles

DNA looping provides stability and robustness to the bacteriophage lambda switch

Density functional approach to the effective interaction between charges within dielectric cavities

Dynamical Phase Transition in a Model for Evolution with Migration

Effects of macromolecular crowding on genetic networks

Electric field-controlled water permeation coupled to ion transport through a nanopore

Electrostatic interactions of charges and dipoles near a polarizable membrane

Electrostatic potential inside ionic solutions confined by dielectrics: a variational approach

Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch

Exact solution of a model DNA-inversion genetic switch with orientational control.

Forward flux sampling for rare event simulations

Forward flux sampling-type schemes for simulating rare events: Efficiency analysis

Genes required for growth at high hydrostatic pressure in Escherichia coli K-12 identified by genome-wide screening.

Growth-dependent drug susceptibility can prevent or enhance spatial expansion of a bacterial population

Homogeneous nucleation under shear in a two-dimensional Ising model: cluster growth, coalescence, and breakup

Inherent Variability in the Kinetics of Autocatalytic Protein Self-Assembly ⬇️

Intermittent Permeation of Cylindrical Nanopores by Water

Kinetic models of ion transport through a nanopore.

Lower glycolysis carries a higher flux than any biochemically possible alternative ⬇️

Malliavin Weight Sampling: A Practical Guide

Malliavin weight sampling for computing sensitivity coefficients in Brownian dynamics simulations.

Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers

Microbial population dynamics and evolution: a statistical physicist's guide

Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles

Molecular dynamics investigation of water permeation through nanopores

Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells ⬇️

Non-equilibrium dynamics of an active colloidal "chucker".

Non-stationary forward flux sampling

Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates.

Osmosis in a minimal model system

Permeation of nanopores by water: the effects of channel polarization

Phase behaviour of active Brownian particles: the role of dimensionality

Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications

Reaction coordinates for the flipping of genetic switches

Resource spectrum engineering by specialist species can shift the specialist-generalist balance

Role of Multicellular Aggregates in Biofilm Formation

Sampling Rare Switching Events in Biochemical Networks

Scalar φ4 field theory for active-particle phase separation

Sedimentation equilibria of colloidal hard rod dispersions

Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates. ⬇️

Simulating rare events in equilibrium or nonequilibrium stochastic systems.

Speed of invasion of an expanding population by a horizontally transmitted trait.

Stability of β-lactam antibiotics in bacterial growth media

Statistical physics of a model binary genetic switch with linear feedback

Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting.

Switching and growth for microbial populations in catastrophic responsive environments

The Pseudomonas aeruginosa PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms.

The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies.