Lista de obras - Ben Corry - Dominio Público Uruguay

A computational assessment of the permeability and salt rejection of carbon nanotube membranes and their application to water desalination

artículo científico publicado en 2016

A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries

artículo científico publicado en 2005

A functional correlate of severity in alternating hemiplegia of childhood

artículo científico publicado en 2015

A mechanical nanogate based on a carbon nanotube for reversible control of ion conduction

artículo científico publicado en 2014

A microfluidic platform to synthesize a G-quadruplex binding ligand.

artículo científico publicado en 2009

A model of calcium channels

scientific article published on 01 December 2000

A model of sodium channels

artículo científico publicado en 2005

Accounting for dye diffusion and orientation when relating FRET measurements to distances: three simple computational methods.

artículo científico publicado en 2014

An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics

artículo científico publicado en 2005

An entropic mechanism of generating selective ion binding in macromolecules

artículo científico publicado en 2013

An improved open-channel structure of MscL determined from FRET confocal microscopy and simulation ⬇️

artículo científico publicado el 1 de octubre de 2010

Anomalous decline of water transport in covalently modified carbon nanotube membranes

artículo científico publicado en 2011

Bacterial mechanosensitive channels: experiment and theory.

artículo científico publicado en 2007

Binding and channeling of alternative substrates in the enzyme DmpFG: a molecular dynamics study.

artículo científico publicado en 2014

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

artículo científico publicado en 2013

Biological channeling of a reactive intermediate in the bifunctional enzyme DmpFG.

artículo científico publicado en 2012

Brownian dynamics investigation into the conductance state of the MscS channel crystal structure.

artículo científico publicado en 2006

Brownian dynamics study of flux ratios in sodium channels

scientific article published on 02 July 2008

Comparing the Ability of Enhanced Sampling Molecular Dynamics Methods To Reproduce the Behavior of Fluorescent Labels on Proteins.

artículo científico publicado en 2015

Computational study of methyl group dynamics in the hydroquinoneclathrate of acetonitrile

article

Computational study of the transmembrane domain of the acetylcholine receptor.

artículo científico publicado en 2009

Conduction mechanisms of chloride ions in ClC-type channels

artículo científico publicado en 2004

Conduction properties of KcsA measured using brownian dynamics with flexible carbonyl groups in the selectivity filter.

artículo científico publicado en 2007

Conformational changes involved in MscL channel gating measured using FRET spectroscopy

artículo científico publicado en 2005

Designing carbon nanotube membranes for efficient water desalination

artículo científico publicado en 2007

Determination of the Kinetic Profile of a Dinuclear Platinum Anticancer Complex in the Presence of Sulfate: Introducing a New Tool for the Expedited Analysis of 2D [1H, 15N] HSQC NMR Spectra ⬇️

artículo científico publicado el 10 de noviembre de 2010

Determination of the orientational distribution and orientation factor for transfer between membrane-bound fluorophores using a confocal microscope

artículo científico publicado en 2006

Diamond nanopillar arrays for quantum microscopy of neuronal signals

scientific article published on 01 July 2020

Dielectric self-energy in Poisson-Boltzmann and Poisson-Nernst-Planck models of ion channels

artículo científico publicado en 2003

Do bifunctional labels solve the problem of dye diffusion in FRET analysis?

artículo científico publicado en 2014

Dynamics of fluorescent dyes attached to G-quadruplex DNA and their effect on FRET experiments

artículo científico publicado en 2015

Electrostatic basis of valence selectivity in cationic channels

artículo científico publicado en 2005

Enhancing the efficacy of cation-independent mannose 6-phosphate receptor inhibitors by intracellular delivery

artículo científico publicado en 2016

ExiFRET: flexible tool for understanding FRET in complex geometries ⬇️

artículo científico publicado el 1 de enero de 2012

Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes

FRET-Modulated Multihybrid Nanoparticles for Brightness-Equalized Single-Wavelength Barcoding

scientific article published on 28 June 2019

Fluorescent triphenyl substituted maleimide derivatives: synthesis, spectroscopy and quantum chemical calculations.

artículo científico publicado en 2010

How does overcoordination create ion selectivity?

artículo científico publicado en 2012

Identification of novel inhibitors of the amino acid transporter B0 AT1 (SLC6A19), a potential target to induce protein restriction and to treat type 2 diabetes.

artículo científico publicado en 2017

Influence of protein flexibility on the electrostatic energy landscape in gramicidin A.

artículo científico publicado en 2004

Intrinsic ion selectivity of narrow hydrophobic pores

artículo científico publicado en 2009

Investigating the size and dynamics of voltage-gated sodium channel fenestrations

artículo científico publicado en 2014

Locating the route of entry and binding sites of benzocaine and phenytoin in a bacterial voltage gated sodium channel

artículo científico publicado en 2014

Mapping the Importance of Four Factors in Creating Monovalent Ion Selectivity in Biological Molecules ⬇️

artículo científico publicado el 5 de enero de 2011

Mechanism of Concerted Hydrogen Bond Reorientation in Clathrates of Dianin’s Compound and Hydroquinone

artículo científico publicado en 2011

Mechanism of ion permeation and selectivity in a voltage gated sodium channel

artículo científico publicado en 2012

Mechanism of the dehydrogenase reaction of DmpFG and analysis of inter-subunit channeling efficiency and thermodynamic parameters in the overall reaction

artículo científico publicado en 2013

Mechanisms of valence selectivity in biological ion channels.

artículo científico publicado en 2006

Mechanistic basis for multidrug resistance and collateral drug sensitivity conferred to the malaria parasite by polymorphisms in PfMDR1 and PfCRT

artículo científico publicado en 2022

Molecular dynamics simulation of the partitioning of benzocaine and phenytoin into a lipid bilayer.

artículo científico publicado en 2013

Molecular dynamics simulations of structure and dynamics of organic molecular crystals

artículo científico publicado en 2010

Multi-ion versus single-ion conduction mechanisms can yield current rectification in biological ion channels

artículo científico publicado en 2014

Mutant bacterial sodium channels as models for local anesthetic block of eukaryotic proteins

artículo científico publicado en 2016

MyoD-family inhibitor proteins act as auxiliary subunits of Piezo channels

artículo científico publicado en 2023

Na+/Ca2+selectivity in the bacterial voltage-gated sodium channel NavAb ⬇️

artículo científico publicado el 12 de febrero de 2013

Nanostructured carbon membranes for breakthrough filtration applications: advancing the science, engineering and design

artículo científico publicado en 2016

Permeation dynamics of chloride ions in the ClC-0 and ClC-1 channels

Pharmacological insights and quirks of bacterial sodium channels.

artículo científico publicado en 2014

Physical basis of specificity and delayed binding of a subtype selective sodium channel inhibitor

artículo científico publicado en 2018

Protonation state of inhibitors determines interaction sites within voltage-gated sodium channels.

artículo científico publicado en 2018

Quantifying barriers to monovalent anion transport in narrow non-polar pores

Quantitative Förster resonance energy transfer efficiency measurements using simultaneous spectral unmixing of excitation and emission spectra

artículo científico publicado en 2013

Redox control of calcium channels: from mechanisms to therapeutic opportunities.

artículo científico publicado en 2007

Response to Comment on “Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes”

Role of acetylcholine receptor domains in ion selectivity.

artículo científico publicado en 2009

Simulation of structure, orientation, and energy transfer between AlexaFluor molecules attached to MscL

artículo científico publicado en 2008

Simulations of guest transport in clathrates of Dianin's compound and hydroquinone

artículo científico publicado en 2013

Solvent Transport Behavior of Shear Aligned Graphene Oxide Membranes and Implications in Organic Solvent Nanofiltration.

artículo científico publicado en 2017

Structural investigation of MscL gating using experimental data and coarse grained MD simulations

artículo científico publicado en 2012

TLR7 gain-of-function genetic variation causes human lupus

artículo científico publicado en 2022

Test of Poisson-Nernst-Planck theory in ion channels

artículo científico publicado en 1999

Testing the applicability of Nernst-Planck theory in ion channels: comparisons with Brownian dynamics simulations.

artículo científico publicado en 2011

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

artículo científico publicado en 2000

The Importance of Dehydration in Determining Ion Transport in Narrow Pores

The confined space inside carbon nanotubes can dictate the stereo- and regioselectivity of Diels-Alder reactions

artículo científico publicado en 2014

The naked truth about K+ selectivity

artículo científico publicado en 2018

The predominant role of coordination number in potassium channel selectivity

artículo científico publicado en 2007

The role of MscL amphipathic N terminus indicates a blueprint for bilayer-mediated gating of mechanosensitive channels

artículo científico publicado en 2016

The role of thermodynamics and kinetics in ligand binding to G-quadruplex DNA

artículo científico publicado el 27 de julio de 2012

Understanding ion channel selectivity and gating and their role in cellular signalling.

artículo científico publicado en 2006

Unraveling the relationship between structure and stabilization of triarylpyridines as G-quadruplex binding ligands

artículo científico publicado en 2011

Voltage-Gated Sodium Channel Pharmacology: Insights From Molecular Dynamics Simulations.

artículo científico publicado en 2017

What have we learnt about the mechanisms of rapid water transport, ion rejection and selectivity in nanopores from molecular simulation?

artículo científico

Lista de obras de Ben Corry

A computational assessment of the permeability and salt rejection of carbon nanotube membranes and their application to water desalination

A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries

A functional correlate of severity in alternating hemiplegia of childhood

A mechanical nanogate based on a carbon nanotube for reversible control of ion conduction

A microfluidic platform to synthesize a G-quadruplex binding ligand.

A model of calcium channels

A model of sodium channels

Accounting for dye diffusion and orientation when relating FRET measurements to distances: three simple computational methods.

An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics

An entropic mechanism of generating selective ion binding in macromolecules

An improved open-channel structure of MscL determined from FRET confocal microscopy and simulation ⬇️

Anomalous decline of water transport in covalently modified carbon nanotube membranes

Bacterial mechanosensitive channels: experiment and theory.

Binding and channeling of alternative substrates in the enzyme DmpFG: a molecular dynamics study.

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

Biological channeling of a reactive intermediate in the bifunctional enzyme DmpFG.

Brownian dynamics investigation into the conductance state of the MscS channel crystal structure.

Brownian dynamics study of flux ratios in sodium channels

Comparing the Ability of Enhanced Sampling Molecular Dynamics Methods To Reproduce the Behavior of Fluorescent Labels on Proteins.

Computational study of methyl group dynamics in the hydroquinoneclathrate of acetonitrile

Computational study of the transmembrane domain of the acetylcholine receptor.

Conduction mechanisms of chloride ions in ClC-type channels

Conduction properties of KcsA measured using brownian dynamics with flexible carbonyl groups in the selectivity filter.

Conformational changes involved in MscL channel gating measured using FRET spectroscopy

Designing carbon nanotube membranes for efficient water desalination

Determination of the Kinetic Profile of a Dinuclear Platinum Anticancer Complex in the Presence of Sulfate: Introducing a New Tool for the Expedited Analysis of 2D [1H, 15N] HSQC NMR Spectra ⬇️

Determination of the orientational distribution and orientation factor for transfer between membrane-bound fluorophores using a confocal microscope

Diamond nanopillar arrays for quantum microscopy of neuronal signals

Dielectric self-energy in Poisson-Boltzmann and Poisson-Nernst-Planck models of ion channels

Do bifunctional labels solve the problem of dye diffusion in FRET analysis?

Dynamics of fluorescent dyes attached to G-quadruplex DNA and their effect on FRET experiments

Electrostatic basis of valence selectivity in cationic channels

Enhancing the efficacy of cation-independent mannose 6-phosphate receptor inhibitors by intracellular delivery

ExiFRET: flexible tool for understanding FRET in complex geometries ⬇️

Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes

FRET-Modulated Multihybrid Nanoparticles for Brightness-Equalized Single-Wavelength Barcoding

Fluorescent triphenyl substituted maleimide derivatives: synthesis, spectroscopy and quantum chemical calculations.

How does overcoordination create ion selectivity?

Identification of novel inhibitors of the amino acid transporter B0 AT1 (SLC6A19), a potential target to induce protein restriction and to treat type 2 diabetes.

Influence of protein flexibility on the electrostatic energy landscape in gramicidin A.

Intrinsic ion selectivity of narrow hydrophobic pores

Investigating the size and dynamics of voltage-gated sodium channel fenestrations

Locating the route of entry and binding sites of benzocaine and phenytoin in a bacterial voltage gated sodium channel

Mapping the Importance of Four Factors in Creating Monovalent Ion Selectivity in Biological Molecules ⬇️

Mechanism of Concerted Hydrogen Bond Reorientation in Clathrates of Dianin’s Compound and Hydroquinone

Mechanism of ion permeation and selectivity in a voltage gated sodium channel

Mechanism of the dehydrogenase reaction of DmpFG and analysis of inter-subunit channeling efficiency and thermodynamic parameters in the overall reaction

Mechanisms of valence selectivity in biological ion channels.

Mechanistic basis for multidrug resistance and collateral drug sensitivity conferred to the malaria parasite by polymorphisms in PfMDR1 and PfCRT

Molecular dynamics simulation of the partitioning of benzocaine and phenytoin into a lipid bilayer.

Molecular dynamics simulations of structure and dynamics of organic molecular crystals

Multi-ion versus single-ion conduction mechanisms can yield current rectification in biological ion channels

Mutant bacterial sodium channels as models for local anesthetic block of eukaryotic proteins

MyoD-family inhibitor proteins act as auxiliary subunits of Piezo channels

Na+/Ca2+selectivity in the bacterial voltage-gated sodium channel NavAb ⬇️

Nanostructured carbon membranes for breakthrough filtration applications: advancing the science, engineering and design

Permeation dynamics of chloride ions in the ClC-0 and ClC-1 channels

Pharmacological insights and quirks of bacterial sodium channels.

Physical basis of specificity and delayed binding of a subtype selective sodium channel inhibitor

Protonation state of inhibitors determines interaction sites within voltage-gated sodium channels.

Quantifying barriers to monovalent anion transport in narrow non-polar pores

Quantitative Förster resonance energy transfer efficiency measurements using simultaneous spectral unmixing of excitation and emission spectra

Redox control of calcium channels: from mechanisms to therapeutic opportunities.

Response to Comment on “Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes”

Role of acetylcholine receptor domains in ion selectivity.

Simulation of structure, orientation, and energy transfer between AlexaFluor molecules attached to MscL

Simulations of guest transport in clathrates of Dianin's compound and hydroquinone

Solvent Transport Behavior of Shear Aligned Graphene Oxide Membranes and Implications in Organic Solvent Nanofiltration.

Structural investigation of MscL gating using experimental data and coarse grained MD simulations

TLR7 gain-of-function genetic variation causes human lupus

Test of Poisson-Nernst-Planck theory in ion channels

Testing the applicability of Nernst-Planck theory in ion channels: comparisons with Brownian dynamics simulations.

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

The Importance of Dehydration in Determining Ion Transport in Narrow Pores

The confined space inside carbon nanotubes can dictate the stereo- and regioselectivity of Diels-Alder reactions

The naked truth about K+ selectivity

The predominant role of coordination number in potassium channel selectivity

The role of MscL amphipathic N terminus indicates a blueprint for bilayer-mediated gating of mechanosensitive channels

The role of thermodynamics and kinetics in ligand binding to G-quadruplex DNA