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Lista de obras de Oliver Ratmann

A Method to Estimate the Size and Characteristics of HIV-positive Populations Using an Individual-based Stochastic Simulation Model

artículo científico publicado en 2015

A Recent Human Immunodeficiency Virus Outbreak Among People Who Inject Drugs in Munich, Germany, Is Associated With Consumption of Synthetic Cathinones

artículo científico publicado en 2020

A dimensionless number for understanding the evolutionary dynamics of antigenically variable RNA viruses

artículo científico publicado en 2011

A sub-national analysis of the rate of transmission of COVID-19 in Italy

scientific article published on 09 May 2020

Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

artículo científico publicado en 2021

Comparison of cluster-based and source-attribution methods for estimating transmission risk using large HIV sequence databases.

artículo científico publicado en 2017

Contemporary statistical inference for infectious disease models using Stan

artículo científico publicado en 2019

Cultural conformity generates extremely stable traditions in bird song.

artículo científico publicado en 2018

Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis

artículo científico publicado en 2015

Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver.

artículo científico publicado en 2018

Explaining rapid reinfections in multiple-wave influenza outbreaks: Tristan da Cunha 1971 epidemic as a case study

artículo científico publicado en 2011

From evidence to inference: probing the evolution of protein interaction networks

artículo científico publicado en 2009

FunCat functional inference with belief propagation and feature integration

artículo científico

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

artículo científico publicado en 2021

HIV-1 Sequence Data Coverage in Central East Africa from 1959 to 2013.

artículo científico publicado en 2016

HIV-1 Transmission Patterns in Men Who Have Sex with Men: Insights from Genetic Source Attribution Analysis

scientific article published on 01 September 2019

HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences

artículo científico publicado en 2017

Impact of cross-protective vaccines on epidemiological and evolutionary dynamics of influenza

artículo científico publicado en 2012

Inference for nonlinear epidemiological models using genealogies and time series

artículo científico publicado en 2011

Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis

article

Mixing patterns of HIV transmission among men who have sex with men in the United Kingdom

article

Model criticism based on likelihood-free inference, with an application to protein network evolution

scholarly article

Molecular Epidemiology of HIV-1 Subtype B Reveals Heterogeneous Transmission Risk: Implications for Intervention and Control

article

Origin, imports and exports of HIV-1 subtype C in South Africa: A historical perspective

artículo científico publicado en 2016

OutbreakTools: a new platform for disease outbreak analysis using the R software

artículo científico publicado en 2014

PANGEA-HIV: phylogenetics for generalised epidemics in Africa

artículo científico publicado en 2015

PHYLOSCANNER: Inferring Transmission from Within- and Between-Host Pathogen Genetic Diversity.

artículo científico publicado en 2017

Pervasive and non-random recombination in near full-length HIV genomes from Uganda

artículo científico publicado en 2020

Phylodynamic inference and model assessment with approximate bayesian computation: influenza as a case study

artículo científico publicado en 2012

Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.

artículo científico publicado en 2016

Phylogenetic and Demographic Characterization of Directed HIV-1 Transmission Using Deep Sequences from High-Risk and General Population Cohorts/Groups in Uganda

scientific article published on 18 March 2020

Phylogenies from dynamic networks

artículo científico publicado en 2019

Quantifying HIV transmission flow between high-prevalence hotspots and surrounding communities: a population-based study in Rakai, Uganda

scientific article published on 14 January 2020

Reply to Robert et al.: Model criticism informs model choice and model comparison

article published in the Proceedings of the National Academy of Sciences of the United States of America

Report 21: Estimating COVID-19 cases and reproduction number in Brazil

artículo científico publicado en 2020

Sources of HIV infection among men having sex with men and implications for prevention

artículo científico publicado en 2016

Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals

artículo científico publicado en 2022

State-level tracking of COVID-19 in the United States

artículo científico publicado en 2020

Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data

artículo científico publicado en 2021

Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum

artículo científico publicado en 2007

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