Lista de obras - Wataru Iwasaki - Dominio Público Uruguay

A Trichosporonales genome tree based on 27 haploid and three evolutionarily conserved 'natural' hybrid genomes

artículo científico publicado en 2017

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

artículo científico publicado en 2019

A sodium binding system alleviates acute salt stress during seawater acclimation in eels

artículo científico publicado en 2017

ADARB1 catalyzes circadian A-to-I editing and regulates RNA rhythm

artículo científico publicado en 2016

An illustrated manual for environmental DNA research: Water sampling guidelines and experimental protocols

artículo científico publicado en 2020

An intuitive, informative, and most balanced representation of phylogenetic topologies.

artículo científico publicado en 2010

Assessment of Polygala paniculata (Polygalaceae) characteristics for evolutionary studies of legume-rhizobia symbiosis

scientific article published on 11 December 2019

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

artículo científico publicado en 2014

CapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data

artículo científico publicado en 2014

Collaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelago

artículo científico publicado en 2018

Complete Genome Sequence of Winogradskyella sp. Strain PG-2, a Proteorhodopsin-Containing Marine Flavobacterium.

artículo científico publicado en 2014

Corrigendum to “The Pliocene-Pleistocene transition had dual effects on north American migratory bird speciation” [PALAEO 462 (15 November 2016) pages 85-91]

artículo científico publicado en 2017

Crossing borders for science

artículo científico publicado en 2014

Deep distributed computing to reconstruct extremely large lineage trees

artículo científico publicado en 2022

Demonstration of the potential of environmental DNA as a tool for the detection of avian species

artículo científico publicado en 2018

Discovery of osmotic sensitive transcription factors in fish intestine via a transcriptomic approach.

artículo científico publicado en 2014

Environmental DNA enables detection of terrestrial mammals from forest pond water

artículo científico publicado en 2017

Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families

artículo científico publicado en 2013

Flexible selection of diversified Na(+)/K(+)-ATPase α-subunit isoforms for osmoregulation in teleosts.

artículo científico publicado en 2016

From β- to α-Proteobacteria: The Origin and Evolution of Rhizobial Nodulation Genes nodIJ

scientific article published in 2013

Function and evolution of a Lotus japonicus AP2/ERF family transcription factor that is required for development of infection threads.

artículo científico publicado en 2016

Functional D-box sequences reset the circadian clock and drive mRNA rhythms

Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria

artículo científico publicado en 2014

Generalist species drive microbial dispersion and evolution

artículo científico publicado en 2017

Generalized centroid estimators in bioinformatics

artículo científico publicado en 2011

Genome and transcriptome evolve separately in recently hybridized fungi

Genomic and metagenomic analysis of microbes in a soil environment affected by the 2011 Great East Japan Earthquake tsunami.

artículo científico publicado en 2016

Global deceleration of gene evolution following recent genome hybridizations in fungi

artículo científico publicado en 2016

Graph Splitting: A Graph-Based Approach for Superfamily-Scale Phylogenetic Tree Reconstruction

artículo científico publicado en 2020

GroupTracker: Video tracking system for multiple animals under severe occlusion

artículo científico publicado en 2015

Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants

artículo científico publicado en 2017

Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era.

artículo científico publicado en 2012

Interactive, multiscale navigation of large and complicated biological networks.

artículo científico publicado en 2011

MetaMetaDB: a database and analytic system for investigating microbial habitability

artículo científico publicado en 2014

Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community

artículo científico publicado en 2019

Metagenomics and Bioinformatics in Microbial Ecology: Current Status and Beyond.

artículo científico publicado en 2016

Methylocaldum marinum sp. nov., a thermotolerant, methane-oxidizing bacterium isolated from marine sediments, and emended description of the genus Methylocaldum.

artículo científico publicado en 2014

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species

artículo científico publicado en 2015

MitoFish and MiFish Pipeline: A Mitochondrial Genome Database of Fish with an Analysis Pipeline for Environmental DNA Metabarcoding.

artículo científico publicado en 2018

MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline.

artículo científico publicado en 2013

Molecular mechanisms underlying active desalination and low water permeability in the esophagus of eels acclimated to seawater.

artículo científico publicado en 2016

Parallel Mitogenome Sequencing Alleviates Random Rooting Effect in Phylogeography

artículo científico publicado en 2016

Parallel selection on gene copy number variations through evolution of three-spined stickleback genomes.

artículo científico publicado en 2014

Piwi-piRNA complexes induce stepwise changes in nuclear architecture at target loci

artículo científico publicado en 2021

Possible cross-feeding pathway of facultative methylotroph Methyloceanibacter caenitepidi Gela4 on methanotroph Methylocaldum marinum S8

artículo científico publicado en 2019

Proteorhodopsin variability and distribution in the North Pacific Subtropical Gyre ⬇️

artículo científico publicado en 2018

Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages

artículo científico publicado en 2009

Recognition and delineation of yeast genera based on genomic data: Lessons from Trichosporonales

artículo científico publicado en 2019

Reconstruction of highly heterogeneous gene-content evolution across the three domains of life

artículo científico publicado en 2007

Seasonal Analysis of Microbial Communities in Precipitation in the Greater Tokyo Area, Japan

artículo científico publicado en 2017

Selection of Orthologous Genes for Construction of a Highly Resolved Phylogenetic Tree and Clarification of the Phylogeny of Trichosporonales Species

artículo científico publicado en 2015

Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia

artículo científico publicado en 2018

SonicParanoid: fast, accurate and easy orthology inference

artículo científico publicado en 2019

Structural Mechanism for Light-driven Transport by a New Type of Chloride Ion Pump, Nonlabens marinus Rhodopsin-3.

artículo científico publicado en 2016

Structural basis of the water-assisted asparagine recognition by asparaginyl-tRNA synthetase.

artículo científico publicado en 2006

Ten Years of Collaborative Progress in the Quest for Orthologs

artículo científico publicado en 2021

Tepidicaulis marinus gen. nov., sp. nov., a marine bacterium that reduces nitrate to nitrous oxide under strictly microaerobic conditions

artículo científico publicado en 2015

The ABCF proteins in <i>Escherichia coli</i> individually cope with ‘hard-to-translate’ nascent peptide sequences

artículo científico publicado en 2024

The Pliocene-Pleistocene transition had dual effects on North American migratory bird speciation

artículo científico publicado en 2016

The Quest for Orthologs benchmark service and consensus calls in 2020

scientific article published on 06 May 2020

The spirit of competition: to win or not to win

artículo científico publicado en 2013

Transfection of Naked Nuclear Factor-κB Decoy Oligodeoxynucleotides into Liver by Rapid Portal Vein Infusion in Rats: Its Effect on Ischemia–Reperfusion Injury of Liver

scientific article published on 10 April 2012

Lista de obras de Wataru Iwasaki

A Trichosporonales genome tree based on 27 haploid and three evolutionarily conserved 'natural' hybrid genomes

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

A sodium binding system alleviates acute salt stress during seawater acclimation in eels

ADARB1 catalyzes circadian A-to-I editing and regulates RNA rhythm

An illustrated manual for environmental DNA research: Water sampling guidelines and experimental protocols

An intuitive, informative, and most balanced representation of phylogenetic topologies.

Assessment of Polygala paniculata (Polygalaceae) characteristics for evolutionary studies of legume-rhizobia symbiosis

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

CapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data

Collaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelago

Complete Genome Sequence of Winogradskyella sp. Strain PG-2, a Proteorhodopsin-Containing Marine Flavobacterium.

Corrigendum to “The Pliocene-Pleistocene transition had dual effects on north American migratory bird speciation” [PALAEO 462 (15 November 2016) pages 85-91]

Crossing borders for science

Deep distributed computing to reconstruct extremely large lineage trees

Demonstration of the potential of environmental DNA as a tool for the detection of avian species

Discovery of osmotic sensitive transcription factors in fish intestine via a transcriptomic approach.

Environmental DNA enables detection of terrestrial mammals from forest pond water

Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families

Flexible selection of diversified Na(+)/K(+)-ATPase α-subunit isoforms for osmoregulation in teleosts.

From β- to α-Proteobacteria: The Origin and Evolution of Rhizobial Nodulation Genes nodIJ

Function and evolution of a Lotus japonicus AP2/ERF family transcription factor that is required for development of infection threads.

Functional D-box sequences reset the circadian clock and drive mRNA rhythms

Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria

Generalist species drive microbial dispersion and evolution

Generalized centroid estimators in bioinformatics

Genome and transcriptome evolve separately in recently hybridized fungi

Genomic and metagenomic analysis of microbes in a soil environment affected by the 2011 Great East Japan Earthquake tsunami.

Global deceleration of gene evolution following recent genome hybridizations in fungi

Graph Splitting: A Graph-Based Approach for Superfamily-Scale Phylogenetic Tree Reconstruction

GroupTracker: Video tracking system for multiple animals under severe occlusion

Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants

Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era.

Interactive, multiscale navigation of large and complicated biological networks.

MetaMetaDB: a database and analytic system for investigating microbial habitability

Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community

Metagenomics and Bioinformatics in Microbial Ecology: Current Status and Beyond.

Methylocaldum marinum sp. nov., a thermotolerant, methane-oxidizing bacterium isolated from marine sediments, and emended description of the genus Methylocaldum.

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species

MitoFish and MiFish Pipeline: A Mitochondrial Genome Database of Fish with an Analysis Pipeline for Environmental DNA Metabarcoding.

MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline.

Molecular mechanisms underlying active desalination and low water permeability in the esophagus of eels acclimated to seawater.

Parallel Mitogenome Sequencing Alleviates Random Rooting Effect in Phylogeography

Parallel selection on gene copy number variations through evolution of three-spined stickleback genomes.

Piwi-piRNA complexes induce stepwise changes in nuclear architecture at target loci

Possible cross-feeding pathway of facultative methylotroph Methyloceanibacter caenitepidi Gela4 on methanotroph Methylocaldum marinum S8

Proteorhodopsin variability and distribution in the North Pacific Subtropical Gyre ⬇️

Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages

Recognition and delineation of yeast genera based on genomic data: Lessons from Trichosporonales

Reconstruction of highly heterogeneous gene-content evolution across the three domains of life

Seasonal Analysis of Microbial Communities in Precipitation in the Greater Tokyo Area, Japan

Selection of Orthologous Genes for Construction of a Highly Resolved Phylogenetic Tree and Clarification of the Phylogeny of Trichosporonales Species

Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia

SonicParanoid: fast, accurate and easy orthology inference

Structural Mechanism for Light-driven Transport by a New Type of Chloride Ion Pump, Nonlabens marinus Rhodopsin-3.

Structural basis of the water-assisted asparagine recognition by asparaginyl-tRNA synthetase.

Ten Years of Collaborative Progress in the Quest for Orthologs

Tepidicaulis marinus gen. nov., sp. nov., a marine bacterium that reduces nitrate to nitrous oxide under strictly microaerobic conditions

The ABCF proteins in <i>Escherichia coli</i> individually cope with ‘hard-to-translate’ nascent peptide sequences

The Pliocene-Pleistocene transition had dual effects on North American migratory bird speciation

The Quest for Orthologs benchmark service and consensus calls in 2020

The spirit of competition: to win or not to win

Transfection of Naked Nuclear Factor-κB Decoy Oligodeoxynucleotides into Liver by Rapid Portal Vein Infusion in Rats: Its Effect on Ischemia–Reperfusion Injury of Liver