Lista de obras - Max A. Alekseyev - Dominio Público Uruguay

10. Making Walks Count: From Silent Circles to Hamiltonian Cycles

5. Solving the Tower of Hanoi with Random Moves

A Computational Method for the Rate Estimation of Evolutionary Transpositions ⬇️

A Unified ILP Framework for Genome Median, Halving, and Aliquoting Problems Under DCJ

Are there rearrangement hotspots in the human genome?

artículo científico publicado en 2007

Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads

Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

artículo científico publicado en 2013

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

artículo científico publicado en 2013

Breakpoint graphs and ancestral genome reconstructions

artículo científico publicado en 2009

CAMSA: A tool for comparative analysis and merging of scaffold assemblies

CAMSA: a tool for comparative analysis and merging of scaffold assemblies

artículo científico publicado en 2017

Colored de Bruijn graphs and the genome halving problem

artículo científico publicado en 2007

Combinatorial Scoring of Phylogenetic Networks ⬇️

scholarly article by Nikita Alexeev & Max A. Alekseyev published 2016 in Lecture Notes in Computer Science

Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters

artículo científico publicado en 2018

Comparative genomics meets topology: a novel view on genome median and halving problems

artículo científico publicado en 2016

Comparative genomics reveals birth and death of fragile regions in mammalian evolution

artículo científico publicado en 2010

Computing solutions to the congruence1n+2n+⋯+nn≡p(modn)

scholarly article by Max A. Alekseyev et al published June 2018 in Discrete Applied Mathematics

Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes

article

Decoding the Genomic Architecture of Mammalian and Plant Genomes: Synteny Blocks and Large-scale Duplications

article

Estimation of the true evolutionary distance under the fragile breakage model

artículo científico publicado en 2017

Estimation of the true evolutionary distance under the fragile breakage model

article

Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies

artículo científico publicado en 2020

Generalized Hultman Numbers and Cycle Structures of Breakpoint Graphs ⬇️

artículo científico publicado en 2017

Generalized Hultman Numbers and the Distribution of Multi-break Distances

Genome Halving Problem Revisited

Implicit Transpositions in Shortest DCJ Scenarios

Limited Lifespan of Fragile Regions in Mammalian Evolution

Linearization of Median Genomes Under the Double-Cut-and-Join-Indel Model.

artículo científico publicado en 2019

Linearization of Median Genomes under DCJ

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes

artículo científico publicado en 2014

Multi-break Rearrangements: From Circular to Linear Genomes

Multi-break rearrangements and breakpoint re-uses: from circular to linear genomes

artículo científico publicado en 2008

Multi-break rearrangements and chromosomal evolution

Multi-genome Scaffold Co-assembly Based on the Analysis of Gene Orders and Genomic Repeats

article

On pairwise distances and median score of three genomes under DCJ

artículo científico publicado en 2012

On problem of orienting ordered scaffolds

On the Intersections of Fibonacci, Pell, and Lucas Numbers

On the Minimal Teaching Sets of Two-Dimensional Threshold Functions

On the Number of Two-Dimensional Threshold Functions

Orientation of Ordered Scaffolds

Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly

Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly

artículo científico publicado en 2012

Phylogenetic analysis of genome rearrangements among five mammalian orders

artículo científico publicado en 2012

Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss

artículo científico publicado en 2016

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

artículo científico publicado en 2012

Scaffold assembly based on genome rearrangement analysis

artículo científico publicado en 2015

Splicing graphs and EST assembly problem

artículo científico publicado en 2002

TRAIL-Based High Throughput Screening Reveals a Link between TRAIL-Mediated Apoptosis and Glutathione Reductase, a Key Component of Oxidative Stress Response

artículo científico publicado en 2015

Transcriptome sequencing based annotation and homologous evidence based scaffolding of Anguilla japonica draft genome

artículo científico publicado en 2016

Weighted Genomic Distance Can Hardly Impose a Bound on the Proportion of Transpositions

article by Shuai Jiang & Max A. Alekseyev published 2011 in Lecture Notes in Computer Science

Weighted de Bruijn Graphs for the Menage Problem and Its Generalizations ⬇️

article published in 2016

Lista de obras de Max A. Alekseyev

10. Making Walks Count: From Silent Circles to Hamiltonian Cycles

5. Solving the Tower of Hanoi with Random Moves

A Computational Method for the Rate Estimation of Evolutionary Transpositions ⬇️

A Unified ILP Framework for Genome Median, Halving, and Aliquoting Problems Under DCJ

Are there rearrangement hotspots in the human genome?

Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads

Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

Breakpoint graphs and ancestral genome reconstructions

CAMSA: A tool for comparative analysis and merging of scaffold assemblies

CAMSA: a tool for comparative analysis and merging of scaffold assemblies

Colored de Bruijn graphs and the genome halving problem

Combinatorial Scoring of Phylogenetic Networks ⬇️

Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters

Comparative genomics meets topology: a novel view on genome median and halving problems

Comparative genomics reveals birth and death of fragile regions in mammalian evolution

Computing solutions to the congruence1n+2n+⋯+nn≡p(modn)

Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes

Decoding the Genomic Architecture of Mammalian and Plant Genomes: Synteny Blocks and Large-scale Duplications

Estimation of the true evolutionary distance under the fragile breakage model

Estimation of the true evolutionary distance under the fragile breakage model

Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies

Generalized Hultman Numbers and Cycle Structures of Breakpoint Graphs ⬇️

Generalized Hultman Numbers and the Distribution of Multi-break Distances

Genome Halving Problem Revisited

Implicit Transpositions in Shortest DCJ Scenarios

Limited Lifespan of Fragile Regions in Mammalian Evolution

Linearization of Median Genomes Under the Double-Cut-and-Join-Indel Model.

Linearization of Median Genomes under DCJ

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes

Multi-break Rearrangements: From Circular to Linear Genomes

Multi-break rearrangements and breakpoint re-uses: from circular to linear genomes

Multi-break rearrangements and chromosomal evolution

Multi-genome Scaffold Co-assembly Based on the Analysis of Gene Orders and Genomic Repeats

On pairwise distances and median score of three genomes under DCJ

On problem of orienting ordered scaffolds

On the Intersections of Fibonacci, Pell, and Lucas Numbers

On the Minimal Teaching Sets of Two-Dimensional Threshold Functions

On the Number of Two-Dimensional Threshold Functions

Orientation of Ordered Scaffolds

Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly

Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly

Phylogenetic analysis of genome rearrangements among five mammalian orders

Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

Scaffold assembly based on genome rearrangement analysis

Splicing graphs and EST assembly problem

TRAIL-Based High Throughput Screening Reveals a Link between TRAIL-Mediated Apoptosis and Glutathione Reductase, a Key Component of Oxidative Stress Response

Transcriptome sequencing based annotation and homologous evidence based scaffolding of Anguilla japonica draft genome

Weighted Genomic Distance Can Hardly Impose a Bound on the Proportion of Transpositions

Weighted de Bruijn Graphs for the Menage Problem and Its Generalizations ⬇️

Whole Genome Duplications and Contracted Breakpoint Graphs