Lista de obras - Antonio Rosato - Dominio Público Uruguay

1H and13C NMR Studies of an Oxidized HiPIP

scientific article published on 01 October 1997

A NMR study of the interaction of a three-domain construct of ATP7A with copper(I) and copper(I)-HAH1: the interplay of domains

artículo científico publicado en 2005

A Simple Protocol for the Comparative Analysis of the Structure and Occurrence of Biochemical Pathways Across Superkingdoms

article

A further investigation of the cytochrome b5-cytochrome c complex

artículo científico publicado en 2003

A hint to search for metalloproteins in gene banks

artículo científico publicado en 2004

A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions

artículo científico publicado en 2016

A structural model for the adduct between cytochrome c and cytochrome c oxidase

article

A systematic investigation of multiheme c-type cytochromes in prokaryotes

artículo científico publicado en 2010

An Italian contribution to structural genomics: Understanding metalloproteins

article

An NMR study of the interaction of the N-terminal cytoplasmic tail of the Wilson disease protein with copper(I)-HAH1.

artículo científico publicado en 2009

An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A.

artículo científico publicado en 2005

An atomistic view of the YiiP structural changes upon zinc(II) binding

artículo científico publicado en 2019

Analysis of the structural quality of the CASD-NMR 2013 entries.

artículo científico publicado en 2015

Automated protein structure determination by NMR

artículo científico publicado en 2015

Backbone Dynamics of Human Cu,Zn Superoxide Dismutase and of Its Monomeric F50E/G51E/E133Q Mutant: The Influence of Dimerization on Mobility and Function†

article

Bioinformatic comparison of structures and homology-models of matrix metalloproteinases

artículo científico publicado en 2004

Blind testing of routine, fully automated determination of protein structures from NMR data

artículo científico publicado en 2012

Browsing gene banks for Fe2S2 ferredoxins and structural modeling of 88 plant-type sequences: An analysis of fold and function

article

CASD-NMR: critical assessment of automated structure determination by NMR

artículo científico publicado en 2009

Can the axial ligand strength be monitored through spectroscopic measurements?

article published in 1996

Comparative Analysis of the ADAM and ADAMTS Families

article

Copper(I)-mediated protein-protein interactions result from suboptimal interaction surfaces

artículo científico publicado en 2009

Counting the zinc-proteins encoded in the human genome

artículo científico publicado en 2006

Evolution of mitochondrial-type cytochrome c domains and of the protein machinery for their assembly

artículo científico publicado en 2007

Exploiting Bacterial Operons To Illuminate Human Iron-Sulfur Proteins

artículo científico publicado en 2016

From correlation to causation: analysis of metabolomics data using systems biology approaches

artículo científico publicado en 2018

Genome-based analysis of heme biosynthesis and uptake in prokaryotic systems

artículo científico publicado en 2008

Hidden relationships between metalloproteins unveiled by structural comparison of their metal sites

artículo científico publicado en 2015

Hydrogen exchange in a bacterial cytochrome c: a fingerprint of the cytochrome c fold

artículo científico publicado en 2003

Insights into telomeric G-quadruplex DNA recognition by HMGB1 protein

artículo científico publicado en 2019

Investigation of the Iron(II) Release Mechanism of Human H-Ferritin as a Function of pH.

artículo científico publicado en 2017

Learning to Identify Physiological and Adventitious Metal-Binding Sites in the Three-Dimensional Structures of Proteins by Following the Hints of a Deep Neural Network

artículo científico publicado en 2022

Magnetic susceptibility tensor anisotropies for a lanthanide ion series in a fixed protein matrix

artículo científico publicado en 2001

MaxOcc: a web portal for maximum occurrence analysis

artículo científico publicado en 2012

Menkes disease

artículo científico publicado en 2008

MetalPDB: a database of metal sites in biological macromolecular structures

artículo científico publicado en 2012

MetalS(3), a database-mining tool for the identification of structurally similar metal sites.

artículo científico publicado en 2014

MetalS2: a tool for the structural alignment of minimal functional sites in metal-binding proteins and nucleic acids.

artículo científico publicado en 2013

Metalloproteomes: a bioinformatic approach.

artículo científico publicado en 2009

Minimal Functional Sites in Metalloproteins and Their Usage in Structural Bioinformatics

artículo científico publicado en 2016

Mitochondrial cytochromes c: a comparative analysis

article

NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria

artículo científico publicado en 2002

Non-heme iron through the three domains of life

artículo científico publicado en 2007

Occurrence of copper proteins through the three domains of life: a bioinformatic approach

artículo científico publicado en 2007

Paramagnetic relaxation as a tool for solution structure determination: Clostridium pasteurianum ferredoxin as an example

artículo científico publicado en 1997

Paramagnetically Induced Residual Dipolar Couplings for Solution Structure Determination of Lanthanide Binding Proteins

scientific article published on 01 May 2002

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

scholarly article by Kristian Peters et al published 7 December 2018 in GigaScience

Predicting zinc binding at the proteome level

artículo científico publicado en 2007

Principles and patterns in the interaction between mono-heme cytochrome c and its partners in electron transfer processes

artículo científico publicado en 2011

Protein structure prediction assisted with sparse NMR data in CASP13

artículo científico publicado en 2019

Quality assessment of protein NMR structures.

artículo científico publicado en 2013

Role of the N-Terminal Tail of Metal-Transporting P1B-type ATPases from Genome-Wide Analysis and Molecular Dynamics Simulations

article

SPINE bioinformatics and data-management aspects of high-throughput structural biology

artículo científico publicado en 2006

SedNMR: a web tool for optimizing sedimentation of macromolecular solutes for SSNMR.

artículo científico publicado en 2013

Solution Structure of Reduced Microsomal Rat Cytochrome b5 ⬇️

artículo científico publicado el 1 de octubre de 1997

Solution structure and intermolecular interactions of the third metal-binding domain of ATP7A, the Menkes disease protein.

artículo científico publicado en 2006

Solution structure calculations through self-orientation in a magnetic field of a cerium(III) substituted calcium-binding protein

artículo científico publicado en 2001

Solution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications

artículo científico publicado en 2002

Solution structure of oxidized horse heart cytochrome c

artículo científico publicado en 1997

Solution structure of paramagnetic metalloproteins

Solution structure of the oxidized Fe7S8 ferredoxin from the thermophilic bacterium Bacillus schlegelii by 1H NMR spectroscopy

artículo científico publicado en 1998

Structural and Dynamical Properties of a Partially Unfolded Fe4S4Protein: Role of the Cofactor in Protein Folding†

artículo científico publicado en 1999

The Atx1-Ccc2 complex is a metal-mediated protein-protein interaction

The Binding Mode of ATP Revealed by the Solution Structure of the N-domain of Human ATP7A

artículo científico publicado en 2010

The Da Vinci European BioBank: A Metabolomics-Driven Infrastructure

artículo científico publicado en 2015

The DisVis and PowerFit Web Servers: Explorative and Integrative Modeling of Biomolecular Complexes.

artículo científico publicado en 2016

The Relationship between Environmental Dioxygen and Iron-Sulfur Proteins Explored at the Genome Level

artículo científico publicado en 2017

The Solution Structure Refinement of the Paramagnetic Reduced High-Potential Iron-Sulfur Protein I from Ectothiorhodospira Halophila by Using Stable Isotope Labeling and Nuclear Relaxation

artículo científico publicado en 1996

The annotation of full zinc proteomes

scientific article published on 05 May 2010

The different intermolecular interactions of the soluble copper-binding domains of the menkes protein, ATP7A.

artículo científico publicado en 2007

The functions of Sco proteins from genome-based analysis

artículo científico publicado en 2007

The future of metabolomics in ELIXIR

artículo científico publicado en 2017

The future of metabolomics in ELIXIR.

artículo científico publicado en 2017

The human iron-proteome

scientific article published on 01 September 2018

The second round of Critical Assessment of Automated Structure Determination of Proteins by NMR: CASD-NMR-2013.

artículo científico publicado en 2015

The solution structure of paramagnetic metalloproteins

artículo científico publicado en 1996

The unfolding of oxidized c-type cytochromes: the instructive case of Bacillus pasteurii

artículo científico publicado en 2002

The war of tools: how can NMR spectroscopists detect errors in their structures?

artículo científico publicado en 2008

To what extent do structural changes in catalytic metal sites affect enzyme function?

artículo científico publicado en 2017

Upgraded AMBER Force Field for Zinc-Binding Residues and Ligands for Predicting Structural Properties and Binding Affinities in Zinc-Proteins

scientific article published on 16 June 2020

Upgrading and Validation of the AMBER Force Field for Histidine and Cysteine Zinc(II)-Binding Residues in Sites with Four Protein Ligands

artículo científico publicado en 2019

WeNMR: Structural Biology on the Grid

artículo científico publicado en 2012

West-Life: A Virtual Research Environment for structural biology

artículo científico publicado en 2019

Zinc proteome interaction network as a model to identify nutrient-affected pathways in human pathologies

artículo científico publicado en 2014

Zinc through the three domains of life.

artículo científico publicado en 2006

nmrML: a community supported open data standard for the description, storage, and exchange of NMR data

artículo científico publicado en 2017

Lista de obras de Antonio Rosato

1H and13C NMR Studies of an Oxidized HiPIP

A NMR study of the interaction of a three-domain construct of ATP7A with copper(I) and copper(I)-HAH1: the interplay of domains

A Simple Protocol for the Comparative Analysis of the Structure and Occurrence of Biochemical Pathways Across Superkingdoms

A further investigation of the cytochrome b5-cytochrome c complex

A hint to search for metalloproteins in gene banks

A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions

A structural model for the adduct between cytochrome c and cytochrome c oxidase

A systematic investigation of multiheme c-type cytochromes in prokaryotes

An Italian contribution to structural genomics: Understanding metalloproteins

An NMR study of the interaction of the N-terminal cytoplasmic tail of the Wilson disease protein with copper(I)-HAH1.

An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A.

An atomistic view of the YiiP structural changes upon zinc(II) binding

Analysis of the structural quality of the CASD-NMR 2013 entries.

Automated protein structure determination by NMR

Backbone Dynamics of Human Cu,Zn Superoxide Dismutase and of Its Monomeric F50E/G51E/E133Q Mutant: The Influence of Dimerization on Mobility and Function†

Bioinformatic comparison of structures and homology-models of matrix metalloproteinases

Blind testing of routine, fully automated determination of protein structures from NMR data

Browsing gene banks for Fe2S2 ferredoxins and structural modeling of 88 plant-type sequences: An analysis of fold and function

CASD-NMR: critical assessment of automated structure determination by NMR

Can the axial ligand strength be monitored through spectroscopic measurements?

Comparative Analysis of the ADAM and ADAMTS Families

Copper(I)-mediated protein-protein interactions result from suboptimal interaction surfaces

Counting the zinc-proteins encoded in the human genome

Evolution of mitochondrial-type cytochrome c domains and of the protein machinery for their assembly

Exploiting Bacterial Operons To Illuminate Human Iron-Sulfur Proteins

From correlation to causation: analysis of metabolomics data using systems biology approaches

Genome-based analysis of heme biosynthesis and uptake in prokaryotic systems

Hidden relationships between metalloproteins unveiled by structural comparison of their metal sites

Hydrogen exchange in a bacterial cytochrome c: a fingerprint of the cytochrome c fold

Insights into telomeric G-quadruplex DNA recognition by HMGB1 protein

Investigation of the Iron(II) Release Mechanism of Human H-Ferritin as a Function of pH.

Learning to Identify Physiological and Adventitious Metal-Binding Sites in the Three-Dimensional Structures of Proteins by Following the Hints of a Deep Neural Network

Magnetic susceptibility tensor anisotropies for a lanthanide ion series in a fixed protein matrix

MaxOcc: a web portal for maximum occurrence analysis

Menkes disease

MetalPDB: a database of metal sites in biological macromolecular structures

MetalS(3), a database-mining tool for the identification of structurally similar metal sites.

MetalS2: a tool for the structural alignment of minimal functional sites in metal-binding proteins and nucleic acids.

Metalloproteomes: a bioinformatic approach.

Minimal Functional Sites in Metalloproteins and Their Usage in Structural Bioinformatics

Mitochondrial cytochromes c: a comparative analysis

NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria

Non-heme iron through the three domains of life

Occurrence of copper proteins through the three domains of life: a bioinformatic approach

Paramagnetic relaxation as a tool for solution structure determination: Clostridium pasteurianum ferredoxin as an example

Paramagnetically Induced Residual Dipolar Couplings for Solution Structure Determination of Lanthanide Binding Proteins

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

Predicting zinc binding at the proteome level

Principles and patterns in the interaction between mono-heme cytochrome c and its partners in electron transfer processes

Protein structure prediction assisted with sparse NMR data in CASP13

Quality assessment of protein NMR structures.

Role of the N-Terminal Tail of Metal-Transporting P1B-type ATPases from Genome-Wide Analysis and Molecular Dynamics Simulations

SPINE bioinformatics and data-management aspects of high-throughput structural biology

SedNMR: a web tool for optimizing sedimentation of macromolecular solutes for SSNMR.

Solution Structure of Reduced Microsomal Rat Cytochrome b5 ⬇️

Solution structure and intermolecular interactions of the third metal-binding domain of ATP7A, the Menkes disease protein.

Solution structure calculations through self-orientation in a magnetic field of a cerium(III) substituted calcium-binding protein

Solution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications

Solution structure of oxidized horse heart cytochrome c

Solution structure of paramagnetic metalloproteins

Solution structure of the oxidized Fe7S8 ferredoxin from the thermophilic bacterium Bacillus schlegelii by 1H NMR spectroscopy

Structural and Dynamical Properties of a Partially Unfolded Fe4S4Protein: Role of the Cofactor in Protein Folding†

The Atx1-Ccc2 complex is a metal-mediated protein-protein interaction

The Binding Mode of ATP Revealed by the Solution Structure of the N-domain of Human ATP7A

The Da Vinci European BioBank: A Metabolomics-Driven Infrastructure

The DisVis and PowerFit Web Servers: Explorative and Integrative Modeling of Biomolecular Complexes.

The Relationship between Environmental Dioxygen and Iron-Sulfur Proteins Explored at the Genome Level

The Solution Structure Refinement of the Paramagnetic Reduced High-Potential Iron-Sulfur Protein I from Ectothiorhodospira Halophila by Using Stable Isotope Labeling and Nuclear Relaxation

The annotation of full zinc proteomes

The different intermolecular interactions of the soluble copper-binding domains of the menkes protein, ATP7A.

The functions of Sco proteins from genome-based analysis

The future of metabolomics in ELIXIR

The future of metabolomics in ELIXIR.

The human iron-proteome

The second round of Critical Assessment of Automated Structure Determination of Proteins by NMR: CASD-NMR-2013.

The solution structure of paramagnetic metalloproteins

The unfolding of oxidized c-type cytochromes: the instructive case of Bacillus pasteurii

The war of tools: how can NMR spectroscopists detect errors in their structures?

To what extent do structural changes in catalytic metal sites affect enzyme function?