Lista de obras - Doheon Lee - Dominio Público Uruguay

A Bayesian ensemble approach with a disease gene network predicts damaging effects of missense variants of human cancers.

artículo científico publicado en 2012

A feature-based approach to modeling protein-protein interaction hot spots.

artículo científico publicado en 2009

A method to improve protein subcellular localization prediction by integrating various biological data sources

artículo científico publicado en 2009

A protein interaction network associated with asthma

artículo científico publicado en 2008

Analysis of AML genes in dysregulated molecular networks

artículo científico publicado en 2009

Anomalies in network bridges involved in bile Acid metabolism predict outcomes of colorectal cancer patients

artículo científico publicado en 2014

AsiDesigner: exon-based siRNA design server considering alternative splicing

artículo científico publicado en 2008

Association between SNPs and gene expression in multiple regions of the human brain ⬇️

artículo científico publicado el 8 de mayo de 2012

BioCAD: an information fusion platform for bio-network inference and analysis

artículo científico publicado en 2007

Combining tissue transcriptomics and urine metabolomics for breast cancer biomarker identification

artículo científico publicado en 2009

Comparative analysis of the JAK/STAT signaling through erythropoietin receptor and thrombopoietin receptor using a systems approach

artículo científico publicado en 2009

Computational identification of combinatorial regulation and transcription factor binding sites

artículo científico publicado en 2007

Context-based resolution of semantic conflicts in biological pathways

artículo científico publicado en 2015

Context-dependent transcriptional regulations between signal transduction pathways ⬇️

artículo científico publicado el 13 de enero de 2011

Context-specific functional module based drug efficacy prediction

artículo científico publicado en 2016

Deconvoluting essential gene signatures for cancer growth from genomic expression in compound-treated cells

article

Differential activation of immune/inflammatory response-related co-expression modules in the hippocampus across the major psychiatric disorders

artículo científico publicado en 2015

Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence

article

Dysregulated signaling hubs of liver lipid metabolism reveal hepatocellular carcinoma pathogenesis

artículo científico publicado en 2016

ETM-DB: integrated Ethiopian traditional herbal medicine and phytochemicals database

scientific article published on 14 August 2019

Exploring molecular links between lymph node invasion and cancer prognosis in human breast cancer.

artículo científico publicado en 2011

Fuzzy clustering of categorical data using fuzzy centroids

Gene expression profiling by mRNA sequencing reveals increased expression of immune/inflammation-related genes in the hippocampus of individuals with schizophrenia

artículo científico publicado en 2013

Generation and application of drug indication inference models using typed network motif comparison analysis ⬇️

artículo científico publicado el 5 de abril de 2013

HIDEEP: a systems approach to predict hormone impacts on drug efficacy based on effect paths

artículo científico publicado en 2017

Identification of temporal association rules from time-series microarray data sets

artículo científico publicado en 2009

In silico profiling of systemic effects of drugs to predict unexpected interactions

artículo científico publicado en 2018

Inference of combinatorial Boolean rules of synergistic gene sets from cancer microarray datasets

artículo científico publicado en 2010

Inference of combinatorial neuronal synchrony with Bayesian networks

artículo científico publicado en 2009

Inferring disease association using clinical factors in a combinatorial manner and their use in drug repositioning

artículo científico publicado en 2013

Inferring pathway activity toward precise disease classification

artículo científico publicado en 2008

MKEM: a Multi-level Knowledge Emergence Model for mining undiscovered public knowledge

artículo científico publicado en 2010

Mathematical modeling of humoral immune response suppression by passively administered antibodies in mice

artículo científico publicado en 2006

Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes

artículo científico publicado en 2010

Meta-analysis method for discovering reliable biomarkers by integrating statistical and biological approaches: An application to liver toxicity

artículo científico publicado en 2016

Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks

scientific article published on 02 April 2019

Mining metastasis related genes by primary-secondary tumor comparisons from large-scale databases

scientific article published on 19 March 2009

Multivariate classification of urine metabolome profiles for breast cancer diagnosis

artículo científico publicado en 2010

Optogenetic mimicry of the transient activation of dopamine neurons by natural reward is sufficient for operant reinforcement

artículo científico publicado en 2012

PSExplorer: whole parameter space exploration for molecular signaling pathway dynamics ⬇️

artículo científico publicado el 2 de agosto de 2010

Patome: a database server for biological sequence annotation and analysis in issued patents and published patent applications

artículo científico publicado en 2007

Phenotype-oriented network analysis for discovering pharmacological effects of natural compounds

artículo científico publicado en 2018

Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors

artículo científico publicado en 2009

Predicting Pharmacodynamic Drug-Drug Interactions through Signaling Propagation Interference on Protein-Protein Interaction Networks

artículo científico publicado en 2015

Predicting unintended effects of drugs based on off-target tissue effects

artículo científico publicado en 2015

Prediction of compound-target interactions of natural products using large-scale drug and protein information.

artículo científico publicado en 2016

Prediction of drugs having opposite effects on disease genes in a directed network.

artículo científico publicado en 2016

Prioritization of SNPs for Genome-Wide Association Studies Using an Interaction Model of Genetic Variation, Gene Expression, and Trait Variation ⬇️

artículo científico publicado el 28 de marzo de 2012

RBSDesigner: software for designing synthetic ribosome binding sites that yields a desired level of protein expression.

artículo científico publicado en 2010

Reliable Data Collection in Participatory Trials to Assess Digital Healthcare Applications

artículo científico publicado en 2020

Rule-based multi-scale simulation for drug effect pathway analysis ⬇️

artículo científico publicado el 5 de abril de 2013

SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data

artículo científico publicado en 2015

Somatic deletions implicated in functional diversity of brain cells of individuals with schizophrenia and unaffected controls

artículo científico publicado en 2014

Synergistic Effects of Sanghuang⁻Danshen Bioactives on Arterial Stiffness in a Randomized Clinical Trial of Healthy Smokers: An Integrative Approach to in silico Network Analysis

artículo científico publicado en 2019

Synergistic mechanisms of Sanghuang-Danshen phytochemicals on postprandial vascular dysfunction in healthy subjects: A network biology approach based on a clinical trial

artículo científico publicado en 2019

Topological motifs populate complex networks through grouped attachment

artículo científico publicado en 2018

Transcriptome sequencing of the choroid plexus in schizophrenia

artículo científico publicado en 2016

bZIPDB: a database of regulatory information for human bZIP transcription factors

artículo científico

Lista de obras de Doheon Lee

A Bayesian ensemble approach with a disease gene network predicts damaging effects of missense variants of human cancers.

A feature-based approach to modeling protein-protein interaction hot spots.

A method to improve protein subcellular localization prediction by integrating various biological data sources

A protein interaction network associated with asthma

Analysis of AML genes in dysregulated molecular networks

Anomalies in network bridges involved in bile Acid metabolism predict outcomes of colorectal cancer patients

AsiDesigner: exon-based siRNA design server considering alternative splicing

Association between SNPs and gene expression in multiple regions of the human brain ⬇️

BioCAD: an information fusion platform for bio-network inference and analysis

Combining tissue transcriptomics and urine metabolomics for breast cancer biomarker identification

Comparative analysis of the JAK/STAT signaling through erythropoietin receptor and thrombopoietin receptor using a systems approach

Computational identification of combinatorial regulation and transcription factor binding sites

Context-based resolution of semantic conflicts in biological pathways

Context-dependent transcriptional regulations between signal transduction pathways ⬇️

Context-specific functional module based drug efficacy prediction

Deconvoluting essential gene signatures for cancer growth from genomic expression in compound-treated cells

Differential activation of immune/inflammatory response-related co-expression modules in the hippocampus across the major psychiatric disorders

Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence

Dysregulated signaling hubs of liver lipid metabolism reveal hepatocellular carcinoma pathogenesis

ETM-DB: integrated Ethiopian traditional herbal medicine and phytochemicals database

Exploring molecular links between lymph node invasion and cancer prognosis in human breast cancer.

Fuzzy clustering of categorical data using fuzzy centroids

Gene expression profiling by mRNA sequencing reveals increased expression of immune/inflammation-related genes in the hippocampus of individuals with schizophrenia

Generation and application of drug indication inference models using typed network motif comparison analysis ⬇️

HIDEEP: a systems approach to predict hormone impacts on drug efficacy based on effect paths

Identification of temporal association rules from time-series microarray data sets

In silico profiling of systemic effects of drugs to predict unexpected interactions

Inference of combinatorial Boolean rules of synergistic gene sets from cancer microarray datasets

Inference of combinatorial neuronal synchrony with Bayesian networks

Inferring disease association using clinical factors in a combinatorial manner and their use in drug repositioning

Inferring pathway activity toward precise disease classification

MKEM: a Multi-level Knowledge Emergence Model for mining undiscovered public knowledge

Mathematical modeling of humoral immune response suppression by passively administered antibodies in mice

Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes

Meta-analysis method for discovering reliable biomarkers by integrating statistical and biological approaches: An application to liver toxicity

Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks

Mining metastasis related genes by primary-secondary tumor comparisons from large-scale databases

Multivariate classification of urine metabolome profiles for breast cancer diagnosis

Optogenetic mimicry of the transient activation of dopamine neurons by natural reward is sufficient for operant reinforcement

PSExplorer: whole parameter space exploration for molecular signaling pathway dynamics ⬇️

Patome: a database server for biological sequence annotation and analysis in issued patents and published patent applications

Phenotype-oriented network analysis for discovering pharmacological effects of natural compounds

Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors

Predicting Pharmacodynamic Drug-Drug Interactions through Signaling Propagation Interference on Protein-Protein Interaction Networks

Predicting unintended effects of drugs based on off-target tissue effects

Prediction of compound-target interactions of natural products using large-scale drug and protein information.

Prediction of drugs having opposite effects on disease genes in a directed network.

Prioritization of SNPs for Genome-Wide Association Studies Using an Interaction Model of Genetic Variation, Gene Expression, and Trait Variation ⬇️

RBSDesigner: software for designing synthetic ribosome binding sites that yields a desired level of protein expression.

Reliable Data Collection in Participatory Trials to Assess Digital Healthcare Applications

Rule-based multi-scale simulation for drug effect pathway analysis ⬇️

SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data

Somatic deletions implicated in functional diversity of brain cells of individuals with schizophrenia and unaffected controls

Synergistic Effects of Sanghuang⁻Danshen Bioactives on Arterial Stiffness in a Randomized Clinical Trial of Healthy Smokers: An Integrative Approach to in silico Network Analysis

Synergistic mechanisms of Sanghuang-Danshen phytochemicals on postprandial vascular dysfunction in healthy subjects: A network biology approach based on a clinical trial

Topological motifs populate complex networks through grouped attachment

Transcriptome sequencing of the choroid plexus in schizophrenia

bZIPDB: a database of regulatory information for human bZIP transcription factors