Lista de obras - Eriko Takano - Dominio Público Uruguay

A 'Plug and Play' Platform for the Production of Diverse Monoterpene Hydrocarbon Scaffolds in Escherichia coli. ⬇️

artículo científico publicado en 2016

A Toolbox for Diverse Oxyfunctionalisation of Monoterpenes

scientific article published in Scientific Reports

A bacterial hormone (the SCB1) directly controls the expression of a pathway-specific regulatory gene in the cryptic type I polyketide biosynthetic gene cluster of Streptomyces coelicolor

artículo científico publicado en 2005

A bistable gene switch for antibiotic biosynthesis: the butyrolactone regulon in Streptomyces coelicolor ⬇️

artículo científico publicado en 2008

A complex role for the gamma-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor A3(2).

artículo científico publicado en 2001

A cryptic type I polyketide synthase (cpk) gene cluster in Streptomyces coelicolor A3(2).

artículo científico publicado en 2006

A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of Streptomyces coelicolor

artículo científico publicado en 2003

A single amino acid substitution in region 1.2 of the principal sigma factor of Streptomyces coelicolor A3(2) results in pleiotropic loss of antibiotic production

artículo científico publicado en 2000

A systematic computational analysis of biosynthetic gene cluster evolution: lessons for engineering biosynthesis

artículo científico publicado en 2014

A transatlantic perspective on 20 emerging issues in biological engineering.

artículo científico publicado en 2017

A turning point for natural product discovery--ESF-EMBO research conference: synthetic biology of antibiotic production

artículo científico publicado en 2012

An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals

artículo científico publicado en 2018

An automated pipeline for the screening of diverse monoterpene synthase libraries

Analysis of two additional signaling molecules in Streptomyces coelicolor and the development of a butyrolactone-specific reporter system ⬇️

artículo científico publicado en 2009

Application of protein N-terminal amidase in enzymatic synthesis of dipeptides containing acidic amino acids specifically at the N-terminus

artículo científico publicado en 2013

Assembling a plug-and-play production line for combinatorial biosynthesis of aromatic polyketides in Escherichia coli

scientific article published on 18 July 2019

Bacterial Microcompartments: Biomaterials for Synthetic Biology-Based Compartmentalization Strategies

scholarly article by Ashley Chessher et al published 26 May 2015 in ACS biomaterials science & engineering

Bioengineering horizon scan 2020

artículo científico publicado en 2020

Bioinformatics for the synthetic biology of natural products: integrating across the Design-Build-Test cycle

artículo científico publicado en 2016

Butyrolactone signalling circuits for synthetic biology

artículo científico

Chapter 6. Regulation of antibiotic production by bacterial hormones

artículo científico publicado en 2009

Characterisation of a natural variant of the γ-butyrolactone signalling receptor

artículo científico publicado en 2012

Comparative genome-scale metabolic modeling of actinomycetes: The topology of essential core metabolism

article

Computational identification of co-evolving multi-gene modules in microbial biosynthetic gene clusters

article

Computational tools for the synthetic design of biochemical pathways

artículo científico publicado en 2012

Construction of thiostrepton-inducible, high-copy-number expression vectors for use in Streptomyces spp.

artículo científico publicado en 1995

Convergent transcription in the butyrolactone regulon in Streptomyces coelicolor confers a bistable genetic switch for antibiotic biosynthesis

artículo científico publicado en 2011

Deletion of a regulatory gene within the cpk gene cluster reveals novel antibacterial activity in Streptomyces coelicolor A3(2).

artículo científico publicado en 2010

Deletion of the signalling molecule synthase ScbA has pleiotropic effects on secondary metabolite biosynthesis, morphological differentiation and primary metabolism in Streptomyces coelicolor A3(2) ⬇️

artículo científico publicado en 2010

Design-based re-engineering of biosynthetic gene clusters: plug-and-play in practice

artículo científico publicado en 2013

Detecting sequence homology at the gene cluster level with MultiGeneBlast

artículo científico publicado en 2013

Enzymatic Menthol Production: One-Pot Approach Using Engineered Escherichia coli

artículo científico publicado en 2015

Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms

article

Exploring novel bacterial terpene synthases

scientific article published on 30 April 2020

Exploring the metabolic state of microorganisms using metabolomics

artículo científico publicado en 2011

Fine-tuning the regulation of Cas9 expression levels for efficient CRISPR-Cas9 mediated recombination in Streptomyces

scientific article published on 04 May 2020

Functional Exchangeability of Oxidase and Dehydrogenase Reactions in the Biosynthesis of Hydroxyphenylglycine, a Nonribosomal Peptide Building Block.

artículo científico publicado en 2015

Gamma-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation

artículo científico publicado en 2006

Genome-based phylogenetic analysis of Streptomyces and its relatives

artículo científico publicado en 2009

Genome-wide gene expression changes in an industrial clavulanic acid overproduction strain of Streptomyces clavuligerus ⬇️

artículo científico publicado en 2010

Genome-wide inference of regulatory networks in Streptomyces coelicolor

artículo científico publicado en 2010

Highly multiplexed, fast and accurate nanopore sequencing for verification of synthetic DNA constructs and sequence libraries

artículo científico publicado en 2019

Identification of genes involved in siderophore transport inStreptomyces coelicolorA3(2) ⬇️

article

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters ⬇️

artículo científico publicado en 2014

Integrated Probabilistic Annotation: A Bayesian-Based Annotation Method for Metabolomic Profiles Integrating Biochemical Connections, Isotope Patterns, and Adduct Relationships

scientific article published on 11 September 2019

Judging synthetic biology risks

artículo científico publicado en 2015

Machine Learning of Designed Translational Control Allows Predictive Pathway Optimization in Escherichia coli

artículo científico publicado en 2019

Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor

artículo científico publicado en 2010

Metabolomic analysis of a synthetic metabolic switch in Streptomyces coelicolor A3(2)

article

Metabolomic characterization of the salt stress response in Streptomyces coelicolor ⬇️

artículo científico publicado en 2010

Metabolomics for secondary metabolite research

artículo científico publicado en 2013

Metabolomics methods for the synthetic biology of secondary metabolism

artículo científico publicado en 2012

Minimum Information about a Biosynthetic Gene cluster.

artículo científico publicado en 2015

Modeling challenges in the synthetic biology of secondary metabolism

artículo científico

MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models

artículo científico publicado en 2012

Natural Product Biosynthesis in Escherichia coli: Mentha Monoterpenoids

artículo científico publicado en 2016

Natural Products: Tools and More Special Issue

Noncoding RNA of glutamine synthetase I modulates antibiotic production in Streptomyces coelicolor A3(2).

artículo científico publicado en 2009

Orthogonal Regulatory Circuits for Escherichia coli Based on the γ-Butyrolactone System of Streptomyces coelicolor. ⬇️

artículo científico publicado en 2018

Output ordering and prioritisation system (OOPS): ranking biosynthetic gene clusters to enhance bioactive metabolite discovery

artículo científico publicado en 2017

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

artículo científico publicado en 2014

Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor

artículo científico publicado en 2011

Purification and properties of a prokaryote type glutamine synthetase from the bialaphos producer Streptomyces hygroscopicus SF1293

Purification and structural determination of SCB1, a gamma-butyrolactone that elicits antibiotic production in Streptomyces coelicolor A3(2) ⬇️

artículo científico publicado en 2000

Replacement of Streptomyces hygroscopicus genomic segments with in vitro altered DNA sequences

artículo científico publicado en 1988

Ribosylhopane, a novel bacterial hopanoid, as precursor of C35 bacteriohopanepolyols in Streptomyces coelicolor A3(2) ⬇️

artículo científico publicado en 2014

SYNBIOCHEM-a SynBio foundry for the biosynthesis and sustainable production of fine and speciality chemicals

artículo científico publicado en 2016

ScbA from Streptomyces coelicolor A3(2) has homology to fatty acid synthases and is able to synthesize -butyrolactones

artículo científico publicado en 2007

SelProm: A Queryable and Predictive Expression Vector Selection Tool for Escherichia coli

scientific article published on 18 March 2019

Selenzyme: Enzyme selection tool for pathway design

Separating the wheat from the chaff: a prioritisation pipeline for the analysis of metabolomics datasets

artículo científico publicado en 2011

Stationary-phase production of the antibiotic actinorhodin in Streptomyces coelicolor A3(2) is transcriptionally regulated

article

Steps towards the synthetic biology of polyketide biosynthesis

artículo científico

Stoffwechselwege vom Reißbrett: neue Ansätze der Naturstoffbiochemie

Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.

artículo científico publicado en 2017

Switchable foldamer ion channels with antibacterial activity

scientific article published on 04 June 2020

Synthetic Biology of Natural Products

artículo científico publicado en 2016

Synthetic Biology of Natural Products

scholarly article published 28 March 2014

Synthetic biology advances for pharmaceutical production

artículo científico publicado en 2015

The Border Sequence of the Balhimycin Biosynthesis Gene Cluster from Amycolatopsis balhimycina Contains bbr , Encoding a StrR-Like Pathway-Specific Regulator

article

The bialaphos biosynthetic genes of Streptomyces hygroscopicus: cloning and analysis of the genes involved in the alanylation step ⬇️

artículo científico publicado en 1988

The bialaphos resistance gene (bar) plays a role in both self-defense and bialaphos biosynthesis in Streptomyces hygroscopicus.

artículo científico publicado en 1988

The dynamic architecture of the metabolic switch in Streptomyces coelicolor.

artículo científico publicado en 2010

The future of industrial antibiotic production: from random mutagenesis to synthetic biology

artículo científico publicado en 2011

The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways

artículo científico publicado en 2010

The “Three Cs” of Novel Antibiotic Discovery and Production through Synthetic Biology: Biosynthetic Gene Clusters, Heterologous Chassis, and Synthetic Microbial Consortia

article

Towards synthesis of monoterpenes and derivatives using synthetic biology

artículo científico publicado en 2016

Towards the sustainable discovery and development of new antibiotics

artículo científico publicado en 2021

Transcriptional regulation of the redD transcriptional activator gene accounts for growth-phase-dependent production of the antibiotic undecylprodigiosin in Streptomyces coelicolor A3(2) ⬇️

scientific journal article

Unravelling the γ-butyrolactone network in Streptomyces coelicolor by computational ensemble modelling

artículo científico publicado en 2020

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

artículo científico publicado en 2013

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

artículo científico publicado en 2015

antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification

artículo científico publicado en 2017

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

artículo científico publicado en 2011

redD and actII-ORF4, pathway-specific regulatory genes for antibiotic production in Streptomyces coelicolor A3(2), are transcribed in vitro by an RNA polymerase holoenzyme containing sigma hrdD. ⬇️

artículo científico publicado en 1996

Lista de obras de Eriko Takano

A 'Plug and Play' Platform for the Production of Diverse Monoterpene Hydrocarbon Scaffolds in Escherichia coli. ⬇️

A Toolbox for Diverse Oxyfunctionalisation of Monoterpenes

A bacterial hormone (the SCB1) directly controls the expression of a pathway-specific regulatory gene in the cryptic type I polyketide biosynthetic gene cluster of Streptomyces coelicolor

A bistable gene switch for antibiotic biosynthesis: the butyrolactone regulon in Streptomyces coelicolor ⬇️

A complex role for the gamma-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor A3(2).

A cryptic type I polyketide synthase (cpk) gene cluster in Streptomyces coelicolor A3(2).

A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of Streptomyces coelicolor

A single amino acid substitution in region 1.2 of the principal sigma factor of Streptomyces coelicolor A3(2) results in pleiotropic loss of antibiotic production

A systematic computational analysis of biosynthetic gene cluster evolution: lessons for engineering biosynthesis

A transatlantic perspective on 20 emerging issues in biological engineering.

A turning point for natural product discovery--ESF-EMBO research conference: synthetic biology of antibiotic production

An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals

An automated pipeline for the screening of diverse monoterpene synthase libraries

Analysis of two additional signaling molecules in Streptomyces coelicolor and the development of a butyrolactone-specific reporter system ⬇️

Application of protein N-terminal amidase in enzymatic synthesis of dipeptides containing acidic amino acids specifically at the N-terminus

Assembling a plug-and-play production line for combinatorial biosynthesis of aromatic polyketides in Escherichia coli

Bacterial Microcompartments: Biomaterials for Synthetic Biology-Based Compartmentalization Strategies

Bioengineering horizon scan 2020

Bioinformatics for the synthetic biology of natural products: integrating across the Design-Build-Test cycle

Butyrolactone signalling circuits for synthetic biology

Chapter 6. Regulation of antibiotic production by bacterial hormones

Characterisation of a natural variant of the γ-butyrolactone signalling receptor

Comparative genome-scale metabolic modeling of actinomycetes: The topology of essential core metabolism

Computational identification of co-evolving multi-gene modules in microbial biosynthetic gene clusters

Computational tools for the synthetic design of biochemical pathways

Construction of thiostrepton-inducible, high-copy-number expression vectors for use in Streptomyces spp.

Convergent transcription in the butyrolactone regulon in Streptomyces coelicolor confers a bistable genetic switch for antibiotic biosynthesis

Deletion of a regulatory gene within the cpk gene cluster reveals novel antibacterial activity in Streptomyces coelicolor A3(2).

Deletion of the signalling molecule synthase ScbA has pleiotropic effects on secondary metabolite biosynthesis, morphological differentiation and primary metabolism in Streptomyces coelicolor A3(2) ⬇️

Design-based re-engineering of biosynthetic gene clusters: plug-and-play in practice

Detecting sequence homology at the gene cluster level with MultiGeneBlast

Enzymatic Menthol Production: One-Pot Approach Using Engineered Escherichia coli

Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms

Exploring novel bacterial terpene synthases

Exploring the metabolic state of microorganisms using metabolomics

Fine-tuning the regulation of Cas9 expression levels for efficient CRISPR-Cas9 mediated recombination in Streptomyces

Functional Exchangeability of Oxidase and Dehydrogenase Reactions in the Biosynthesis of Hydroxyphenylglycine, a Nonribosomal Peptide Building Block.

Gamma-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation

Genome-based phylogenetic analysis of Streptomyces and its relatives

Genome-wide gene expression changes in an industrial clavulanic acid overproduction strain of Streptomyces clavuligerus ⬇️

Genome-wide inference of regulatory networks in Streptomyces coelicolor

Highly multiplexed, fast and accurate nanopore sequencing for verification of synthetic DNA constructs and sequence libraries

Identification of genes involved in siderophore transport inStreptomyces coelicolorA3(2) ⬇️

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters ⬇️

Integrated Probabilistic Annotation: A Bayesian-Based Annotation Method for Metabolomic Profiles Integrating Biochemical Connections, Isotope Patterns, and Adduct Relationships

Judging synthetic biology risks

Machine Learning of Designed Translational Control Allows Predictive Pathway Optimization in Escherichia coli

Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor

Metabolomic analysis of a synthetic metabolic switch in Streptomyces coelicolor A3(2)

Metabolomic characterization of the salt stress response in Streptomyces coelicolor ⬇️

Metabolomics for secondary metabolite research

Metabolomics methods for the synthetic biology of secondary metabolism

Minimum Information about a Biosynthetic Gene cluster.

Modeling challenges in the synthetic biology of secondary metabolism

MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models

Natural Product Biosynthesis in Escherichia coli: Mentha Monoterpenoids

Natural Products: Tools and More Special Issue

Noncoding RNA of glutamine synthetase I modulates antibiotic production in Streptomyces coelicolor A3(2).

Orthogonal Regulatory Circuits for Escherichia coli Based on the γ-Butyrolactone System of Streptomyces coelicolor. ⬇️

Output ordering and prioritisation system (OOPS): ranking biosynthetic gene clusters to enhance bioactive metabolite discovery

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor

Purification and properties of a prokaryote type glutamine synthetase from the bialaphos producer Streptomyces hygroscopicus SF1293

Purification and structural determination of SCB1, a gamma-butyrolactone that elicits antibiotic production in Streptomyces coelicolor A3(2) ⬇️

Replacement of Streptomyces hygroscopicus genomic segments with in vitro altered DNA sequences

Ribosylhopane, a novel bacterial hopanoid, as precursor of C35 bacteriohopanepolyols in Streptomyces coelicolor A3(2) ⬇️

SYNBIOCHEM-a SynBio foundry for the biosynthesis and sustainable production of fine and speciality chemicals

ScbA from Streptomyces coelicolor A3(2) has homology to fatty acid synthases and is able to synthesize -butyrolactones

SelProm: A Queryable and Predictive Expression Vector Selection Tool for Escherichia coli

Selenzyme: Enzyme selection tool for pathway design

Separating the wheat from the chaff: a prioritisation pipeline for the analysis of metabolomics datasets

Stationary-phase production of the antibiotic actinorhodin in Streptomyces coelicolor A3(2) is transcriptionally regulated

Steps towards the synthetic biology of polyketide biosynthesis

Stoffwechselwege vom Reißbrett: neue Ansätze der Naturstoffbiochemie

Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.

Switchable foldamer ion channels with antibacterial activity

Synthetic Biology of Natural Products

Synthetic Biology of Natural Products

Synthetic biology advances for pharmaceutical production