Lista de obras - Hannes L. Röst - Dominio Público Uruguay

A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis

artículo científico publicado en 2013

A computational tool to detect and avoid redundancy in selected reaction monitoring

artículo científico publicado en 2012

A multicenter study benchmarks software tools for label-free proteome quantification

artículo científico publicado en 2016

A repository of assays to quantify 10,000 human proteins by SWATH-MS.

artículo científico publicado en 2014

Absolute Proteome Composition and Dynamics during Dormancy and Resuscitation of Mycobacterium tuberculosis

artículo científico publicado en 2015

Amino acid and lipid metabolism in post-gestational diabetes and progression to type 2 diabetes: A metabolic profiling study

artículo científico publicado en 2020

Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms

artículo científico publicado en 2017

Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms

BioContainers: An open-source and community-driven framework for software standardization

artículo científico publicado en 2017

DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics

artículo científico publicado en 2022

DIANA--algorithmic improvements for analysis of data-independent acquisition MS data

artículo científico publicado en 2014

DIAlignR Provides Precise Retention Time Alignment Across Distant Runs in DIA and Targeted Proteomics

artículo científico publicado en 2019

Deep learning adds an extra dimension to peptide fragmentation

scientific article published on 01 June 2019

Efficient visualization of high-throughput targeted proteomics experiments: TAPIR.

artículo científico publicado en 2015

Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry

artículo científico publicado en 2015

From hype to reality: data science enabling personalized medicine

artículo científico publicado en 2018

Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide

artículo científico publicado en 2017

High-frequency actionable pathogenic exome variants in an average-risk cohort

artículo científico publicado en 2018

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry

artículo científico publicado en 2015

Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS.

artículo científico publicado en 2017

Integrative Personal Omics Profiles during Periods of Weight Gain and Loss.

artículo científico publicado en 2018

Longitudinal multi-omics of host-microbe dynamics in prediabetes

scientific article published on 29 May 2019

Machine Learning in Mass Spectrometric Analysis of DIA Data

scientific article published on 15 February 2020

Numerical compression schemes for proteomics mass spectrometry data

artículo científico publicado en 2014

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

artículo científico publicado en 2016

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data

artículo científico publicado en 2014

PRMT5 inhibition disrupts splicing and stemness in glioblastoma

artículo científico publicado en 2021

Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system

artículo científico publicado en 2013

Quantitative proteomics: challenges and opportunities in basic and applied research

artículo científico

Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps

artículo científico publicado en 2015

Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics

artículo científico publicado en 2012

Reproducible quantitative proteotype data matrices for systems biology

artículo científico publicado en 2015

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses

artículo científico publicado en 2017

Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition

Systems-level Proteomics of Two Ubiquitous Leaf Commensals Reveals Complementary Adaptive Traits for Phyllosphere Colonization

artículo científico publicado en 2016

TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics

scientific article published on August 2016

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

artículo científico publicado en 2012

The Mtb proteome library: A resource of assays to quantify the complete proteome of mycobacterium tuberculosis

artículo científico publicado en 2013

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data

artículo científico publicado en 2014

diaPASEF: parallel accumulation-serial fragmentation combined with data-independent acquisition

artículo científico publicado en 2020

pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library

artículo científico

xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry

artículo científico publicado en 2015

Lista de obras de Hannes L. Röst

A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis

A computational tool to detect and avoid redundancy in selected reaction monitoring

A multicenter study benchmarks software tools for label-free proteome quantification

A repository of assays to quantify 10,000 human proteins by SWATH-MS.

Absolute Proteome Composition and Dynamics during Dormancy and Resuscitation of Mycobacterium tuberculosis

Amino acid and lipid metabolism in post-gestational diabetes and progression to type 2 diabetes: A metabolic profiling study

Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms

Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms

BioContainers: An open-source and community-driven framework for software standardization

DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics

DIANA--algorithmic improvements for analysis of data-independent acquisition MS data

DIAlignR Provides Precise Retention Time Alignment Across Distant Runs in DIA and Targeted Proteomics

Deep learning adds an extra dimension to peptide fragmentation

Efficient visualization of high-throughput targeted proteomics experiments: TAPIR.

Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry

From hype to reality: data science enabling personalized medicine

Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide

High-frequency actionable pathogenic exome variants in an average-risk cohort

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry

Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS.

Integrative Personal Omics Profiles during Periods of Weight Gain and Loss.

Longitudinal multi-omics of host-microbe dynamics in prediabetes

Machine Learning in Mass Spectrometric Analysis of DIA Data

Numerical compression schemes for proteomics mass spectrometry data

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data

PRMT5 inhibition disrupts splicing and stemness in glioblastoma

Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system

Quantitative proteomics: challenges and opportunities in basic and applied research

Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps

Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics

Reproducible quantitative proteotype data matrices for systems biology

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses

Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition

Systems-level Proteomics of Two Ubiquitous Leaf Commensals Reveals Complementary Adaptive Traits for Phyllosphere Colonization

TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

The Mtb proteome library: A resource of assays to quantify the complete proteome of mycobacterium tuberculosis

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data

diaPASEF: parallel accumulation-serial fragmentation combined with data-independent acquisition

pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library

xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry