Lista de obras - Jan Lipfert - Dominio Público Uruguay

A Mo-anode-based in-house source for small-angle X-ray scattering measurements of biological macromolecules

artículo científico publicado en 2016

A force calibration standard for magnetic tweezers

artículo científico publicado en 2014

A method to track rotational motion for use in single-molecule biophysics

artículo científico publicado en 2011

A repulsive field: advances in the electrostatics of the ion atmosphere

artículo científico publicado en 2008

Absolute Intramolecular Distance Measurements with Angstrom-Resolution Using Anomalous Small-Angle X-ray Scattering

artículo científico publicado en 2016

Analysis of small-angle X-ray scattering data of protein–detergent complexes by singular value decomposition

Applying torque to the Escherichia coli flagellar motor using magnetic tweezers

artículo científico publicado en 2017

Biological Magnetometry: Torque on Superparamagnetic Beads in Magnetic Fields

artículo científico publicado en 2015

Blind predictions of DNA and RNA tweezers experiments with force and torque

artículo científico publicado en 2014

Cation-Anion Interactions within the Nucleic Acid Ion Atmosphere Revealed by Ion Counting

artículo científico publicado en 2015

Compensatory Mechanisms in Temperature Dependence of DNA Double Helical Structure: Bending and Elongation

scientific article published on 31 March 2020

Conformational Changes and Flexibility of DNA Devices Observed by Small-Angle X-ray Scattering

artículo científico publicado en 2016

Corrigendum: Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids

artículo científico publicado en 2015

Critical assessment of nucleic acid electrostatics via experimental and computational investigation of an unfolded state ensemble

artículo científico publicado en 2008

Dependence of micelle size and shape on detergent alkyl chain length and head group

artículo científico publicado en 2013

Designed anchoring geometries determine lifetimes of biotin-streptavidin bonds under constant load and enable ultra-stable coupling

artículo científico publicado en 2020

Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding

artículo científico publicado en 2010

Do conformational biases of simple helical junctions influence RNA folding stability and specificity?

artículo científico publicado en 2009

Double-stranded RNA under force and torque: similarities to and striking differences from double-stranded DNA.

artículo científico publicado en 2014

Electromagnetic torque tweezers: a versatile approach for measurement of single-molecule twist and torque

artículo científico publicado en 2012

Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theory

artículo científico publicado en 2007

Explaining the striking difference in twist-stretch coupling between DNA and RNA: A comparative molecular dynamics analysis

artículo científico publicado en 2015

Expression, purification, and characterization of Thermotoga maritima membrane proteins for structure determination

artículo científico publicado en 2006

Force sensing by the vascular protein von Willebrand factor is tuned by a strong intermonomer interaction.

artículo científico publicado en 2016

Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy

article

Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids

artículo científico publicado en 2011

Gold nanocrystal labels provide a sequence-to-3D structure map in SAXS reconstructions.

artículo científico publicado en 2018

High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.

artículo científico publicado en 2015

Long single alpha-helical tail domains bridge the gap between structure and function of myosin VI.

artículo científico publicado en 2008

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

artículo científico publicado en 2010

Magnetic tweezers for the measurement of twist and torque

artículo científico publicado en 2014

Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution

artículo científico publicado en 2006

Mixing and Matching Detergents for Membrane Protein NMR Structure Determination

Mixing and matching detergents for membrane protein NMR structure determination

artículo científico publicado en 2009

Modulating the Physical Properties of Micelles for Membrane Protein Investigations

Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold

artículo científico publicado en 2021

Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes

artículo científico publicado en 2015

Probing the mechanical properties, conformational changes, and interactions of nucleic acids with magnetic tweezers.

artículo científico publicado en 2016

Probing the salt dependence of the torsional stiffness of DNA by multiplexed magnetic torque tweezers

artículo científico publicado en 2017

Protein misfolding and amyloid formation for the peptide GNNQQNY from yeast prion protein Sup35: simulation by reaction path annealing

artículo científico publicado en 2005

Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids

artículo científico publicado en 2007

Quantitative evaluation of statistical errors in small-angle X-ray scattering measurements.

artículo científico publicado en 2017

Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.

artículo científico publicado en 2010

Quantitative modeling and optimization of magnetic tweezers

artículo científico publicado en 2009

Riboswitch conformations revealed by small-angle X-ray scattering

artículo científico publicado en 2009

Ru(TAP)32+ uses multivalent binding to accelerate and constrain photo-adduct formation on DNA

artículo científico publicado en 2019

Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering

artículo científico publicado en 2012

Single-Molecule Magnetic Tweezers Studies of Type IB Topoisomerases

artículo científico publicado en 2009

Size and shape of detergent micelles determined by small-angle X-ray scattering

artículo científico publicado en 2007

Small-angle X-ray scattering from RNA, proteins, and protein complexes

artículo científico publicado en 2007

Structural Architecture of the Nucleosome Remodeler ISWI Determined from Cross-Linking, Mass Spectrometry, SAXS, and Modeling

artículo científico publicado en 2018

Structural and torsional properties of the RAD51-dsDNA nucleoprotein filament

artículo científico publicado en 2013

Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae

artículo científico publicado en 2006

Structure, mechanics, and binding mode heterogeneity of LEDGF/p75–DNA nucleoprotein complexes revealed by scanning force microscopy

scientific article published on 01 May 2014

Studying genomic processes at the single-molecule level: introducing the tools and applications

artículo científico publicado en 2012

Supercoiling-dependent DNA binding: quantitative modeling and applications to bulk and single-molecule experiments

artículo científico publicado en 2023

The Dissociation Rate of Acetylacetonate Ligands Governs the Size of Ferrimagnetic Zinc Ferrite Nanocubes

artículo científico publicado en 2019

The complete VS ribozyme in solution studied by small-angle X-ray scattering

artículo científico publicado en 2008

The free energy landscape of retroviral integration

scientific article published on 18 October 2019

The ligand-free state of the TPP riboswitch: a partially folded RNA structure

artículo científico publicado en 2009

Time-Resolved Small-Angle X-ray Scattering Reveals Millisecond Transitions of a DNA Origami Switch

artículo científico publicado en 2018

Topology-dependent DNA binding

artículo científico publicado en 2023

Torque spectroscopy for the study of rotary motion in biological systems

artículo científico

Torsional sensing of small-molecule binding using magnetic tweezers

artículo científico publicado en 2010

Tuning micelle dimensions and properties with binary surfactant mixtures

artículo científico publicado en 2014

Twist-Bend Coupling and the Torsional Response of Double-Stranded DNA.

artículo científico publicado en 2017

Understanding nucleic acid-ion interactions

artículo científico publicado en 2014

Unusual compactness of a polyproline type II structure

artículo científico publicado en 2005

Use of small angle X-ray scattering (SAXS) to characterize conformational states of functional RNAs

artículo científico publicado en 2009

pH-Dependent Interactions in Dimers Govern the Mechanics and Structure of von Willebrand Factor

artículo científico publicado en 2016

Lista de obras de Jan Lipfert

A Mo-anode-based in-house source for small-angle X-ray scattering measurements of biological macromolecules

A force calibration standard for magnetic tweezers

A method to track rotational motion for use in single-molecule biophysics

A repulsive field: advances in the electrostatics of the ion atmosphere

Absolute Intramolecular Distance Measurements with Angstrom-Resolution Using Anomalous Small-Angle X-ray Scattering

Analysis of small-angle X-ray scattering data of protein–detergent complexes by singular value decomposition

Applying torque to the Escherichia coli flagellar motor using magnetic tweezers

Biological Magnetometry: Torque on Superparamagnetic Beads in Magnetic Fields

Blind predictions of DNA and RNA tweezers experiments with force and torque

Cation-Anion Interactions within the Nucleic Acid Ion Atmosphere Revealed by Ion Counting

Compensatory Mechanisms in Temperature Dependence of DNA Double Helical Structure: Bending and Elongation

Conformational Changes and Flexibility of DNA Devices Observed by Small-Angle X-ray Scattering

Corrigendum: Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids

Critical assessment of nucleic acid electrostatics via experimental and computational investigation of an unfolded state ensemble

Dependence of micelle size and shape on detergent alkyl chain length and head group

Designed anchoring geometries determine lifetimes of biotin-streptavidin bonds under constant load and enable ultra-stable coupling

Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding

Do conformational biases of simple helical junctions influence RNA folding stability and specificity?

Double-stranded RNA under force and torque: similarities to and striking differences from double-stranded DNA.

Electromagnetic torque tweezers: a versatile approach for measurement of single-molecule twist and torque

Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theory

Explaining the striking difference in twist-stretch coupling between DNA and RNA: A comparative molecular dynamics analysis

Expression, purification, and characterization of Thermotoga maritima membrane proteins for structure determination

Force sensing by the vascular protein von Willebrand factor is tuned by a strong intermonomer interaction.

Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy

Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids

Gold nanocrystal labels provide a sequence-to-3D structure map in SAXS reconstructions.

High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.

Long single alpha-helical tail domains bridge the gap between structure and function of myosin VI.

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

Magnetic tweezers for the measurement of twist and torque

Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution

Mixing and Matching Detergents for Membrane Protein NMR Structure Determination

Mixing and matching detergents for membrane protein NMR structure determination

Modulating the Physical Properties of Micelles for Membrane Protein Investigations

Molecular structure, DNA binding mode, photophysical properties and recommendations for use of SYBR Gold

Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes

Probing the mechanical properties, conformational changes, and interactions of nucleic acids with magnetic tweezers.

Probing the salt dependence of the torsional stiffness of DNA by multiplexed magnetic torque tweezers

Protein misfolding and amyloid formation for the peptide GNNQQNY from yeast prion protein Sup35: simulation by reaction path annealing

Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids

Quantitative evaluation of statistical errors in small-angle X-ray scattering measurements.

Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.

Quantitative modeling and optimization of magnetic tweezers

Riboswitch conformations revealed by small-angle X-ray scattering

Ru(TAP)32+ uses multivalent binding to accelerate and constrain photo-adduct formation on DNA

Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering

Single-Molecule Magnetic Tweezers Studies of Type IB Topoisomerases

Size and shape of detergent micelles determined by small-angle X-ray scattering

Small-angle X-ray scattering from RNA, proteins, and protein complexes

Structural Architecture of the Nucleosome Remodeler ISWI Determined from Cross-Linking, Mass Spectrometry, SAXS, and Modeling

Structural and torsional properties of the RAD51-dsDNA nucleoprotein filament

Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae

Structure, mechanics, and binding mode heterogeneity of LEDGF/p75–DNA nucleoprotein complexes revealed by scanning force microscopy

Studying genomic processes at the single-molecule level: introducing the tools and applications

Supercoiling-dependent DNA binding: quantitative modeling and applications to bulk and single-molecule experiments

The Dissociation Rate of Acetylacetonate Ligands Governs the Size of Ferrimagnetic Zinc Ferrite Nanocubes

The complete VS ribozyme in solution studied by small-angle X-ray scattering

The free energy landscape of retroviral integration

The ligand-free state of the TPP riboswitch: a partially folded RNA structure

Time-Resolved Small-Angle X-ray Scattering Reveals Millisecond Transitions of a DNA Origami Switch

Topology-dependent DNA binding

Torque spectroscopy for the study of rotary motion in biological systems

Torsional sensing of small-molecule binding using magnetic tweezers

Tuning micelle dimensions and properties with binary surfactant mixtures

Twist-Bend Coupling and the Torsional Response of Double-Stranded DNA.

Understanding nucleic acid-ion interactions

Unusual compactness of a polyproline type II structure

Use of small angle X-ray scattering (SAXS) to characterize conformational states of functional RNAs

pH-Dependent Interactions in Dimers Govern the Mechanics and Structure of von Willebrand Factor