Lista de obras - Jonathan R. Karr - Dominio Público Uruguay

A combined systems and structural modeling approach repositions antibiotics for Mycoplasma genitalium

artículo científico publicado en 2015

Accelerated discovery via a whole-cell model

artículo científico publicado en 2013

DE-Sim: an object-oriented, discrete-event simulation tool for data-intensive modeling of complex systems in Python

artículo científico publicado en 2020

Guidelines for Reproducibly Building and Simulating Systems Biology Models

artículo científico publicado en 2016

Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli.

artículo científico publicado en 2008

NetworkPainter: dynamic intracellular pathway animation in Cytobank

artículo científico publicado en 2015

Organizing genome engineering for the gigabase scale

scientific article published on 04 February 2020

Practical resources for enhancing the reproducibility of mechanistic modeling in systems biology

artículo científico publicado en 2021

Reusability and composability in process description maps: RAS-RAF-MEK-ERK signalling

artículo científico publicado en 2020

Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models

artículo científico publicado en 2015

The principles of whole-cell modeling

artículo científico

The simulation experiment description markup language (SED-ML): language specification for level 1 version 5

artículo científico publicado en 2024

Toward Community Standards and Software for Whole-Cell Modeling

artículo científico publicado en 2016

WholeCellKB: model organism databases for comprehensive whole-cell models ⬇️

artículo científico publicado el 21 de noviembre de 2012

WholeCellSimDB: a hybrid relational/HDF database for whole-cell model predictions

artículo científico publicado en 2014

WholeCellViz: data visualization for whole-cell models

artículo científico publicado en 2013

Lista de obras de Jonathan R. Karr

A combined systems and structural modeling approach repositions antibiotics for Mycoplasma genitalium

Accelerated discovery via a whole-cell model

DE-Sim: an object-oriented, discrete-event simulation tool for data-intensive modeling of complex systems in Python

Guidelines for Reproducibly Building and Simulating Systems Biology Models

Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli.

NetworkPainter: dynamic intracellular pathway animation in Cytobank

Organizing genome engineering for the gigabase scale

Practical resources for enhancing the reproducibility of mechanistic modeling in systems biology

Reusability and composability in process description maps: RAS-RAF-MEK-ERK signalling

Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models

The principles of whole-cell modeling

The simulation experiment description markup language (SED-ML): language specification for level 1 version 5

Toward Community Standards and Software for Whole-Cell Modeling

WholeCellKB: model organism databases for comprehensive whole-cell models ⬇️

WholeCellSimDB: a hybrid relational/HDF database for whole-cell model predictions

WholeCellViz: data visualization for whole-cell models