Lista de obras - Pedro Carmona-Saez - Dominio Público Uruguay

A comprehensive database for integrated analysis of omics data in autoimmune diseases

artículo científico publicado en 2021

A free radical-generating system induces the cholesterol biosynthesis pathway: a role in Alzheimer's disease

artículo científico publicado en 2009

A literature-based similarity metric for biological processes.

artículo científico publicado en 2006

A survey of gene expression meta-analysis: methods and applications

artículo científico publicado en 2020

Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.

artículo científico publicado en 2006

ChIPCodis: mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data

artículo científico publicado en 2008

Computational Methods and Software Tools for Functional Analysis of miRNA Data

scientific article published on 28 August 2020

Deep Learning in Omics Data Analysis and Precision Medicine

scholarly article published 10 December 2019

Differential Treatments Based on Drug-induced Gene Expression Signatures and Longitudinal Systemic Lupus Erythematosus Stratification

scientific article published on 29 October 2019

Direct Detection of miR-122 in Hepatotoxicity Using Dynamic Chemical Labeling Overcomes Stability and isomiR Challenges

artículo científico publicado en 2020

Discovering semantic features in the literature: a foundation for building functional associations

artículo científico publicado en 2006

Exosomal miRNA profile as complementary tool in the diagnostic and prediction of treatment response in localized breast cancer under neoadjuvant chemotherapy

artículo científico publicado en 2019

Functional Enrichment Analysis of Regulatory Elements

artículo científico publicado en 2022

GARP is a key molecule for mesenchymal stromal cell responses to TGF-β and fundamental to control mitochondrial ROS levels

scientific article published on 19 February 2020

GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists

artículo científico publicado en 2007

GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information

scientific article published on 22 May 2009

Genetic polymorphisms influence on the response to clopidogrel in peripheral artery disease patients following percutaneous transluminal angioplasty.

artículo científico publicado en 2016

Gut Microbiota Composition Is Associated With the Global DNA Methylation Pattern in Obesity

artículo científico publicado en 2019

ImaGEO: integrative gene expression meta-analysis from GEO database

scientific article published on 01 March 2019

Influence of the HER2 Ile655Val polymorphism on trastuzumab-induced cardiotoxicity in HER2-positive breast cancer patients: a meta-analysis.

artículo científico publicado en 2015

Integrated analysis of gene expression by Association Rules Discovery

artículo científico publicado en 2006

MARQ: an online tool to mine GEO for experiments with similar or opposite gene expression signatures

artículo científico publicado en 2010

MetaGenyo: a web tool for meta-analysis of genetic association studies.

artículo científico publicado en 2017

Metagene projection characterizes GEN2.2 and CAL-1 as relevant human plasmacytoid dendritic cell models

artículo científico publicado en 2017

Methodology for Y Chromosome Capture: A complete genome sequence of Y chromosome using flow cytometry, laser microdissection and magnetic streptavidin-beads.

artículo científico publicado en 2018

NOMePlot: analysis of DNA methylation and nucleosome occupancy at the single molecule.

artículo científico publicado en 2019

Placental DNA methylation signatures of maternal smoking during pregnancy and potential impacts on fetal growth

artículo científico publicado en 2021

Polycomb regulation is coupled to cell cycle transition in pluripotent stem cells

artículo científico publicado en 2020

Prognostic factor analysis of circulating tumor cells in peripheral blood of patients with peritoneal carcinomatosis of colon cancer origin treated with cytoreductive surgery plus an intraoperative hyperthermic intraperitoneal chemotherapy procedure

artículo científico publicado en 2015

Prognostic role of genetic biomarkers in clinical progression of prostate cancer

artículo científico publicado en 2015

Ribavirin acts via multiple pathways in inhibition of leukemic cell proliferation.

artículo científico publicado en 2009

SENT: semantic features in text

artículo científico publicado en 2009

SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays.

artículo científico publicado en 2008

Shared signatures between rheumatoid arthritis, systemic lupus erythematosus and Sjögren's syndrome uncovered through gene expression meta-analysis.

artículo científico publicado en 2014

Stratification of Systemic Lupus Erythematosus Patients Into Three Groups of Disease Activity Progression According to Longitudinal Gene Expression

article

Support for phosphoinositol 3 kinase and mTOR inhibitors as treatment for lupus using in-silico drug-repurposing analysis

scientific article published on 11 March 2017

The molecular clock protein Bmal1 regulates cell differentiation in mouse embryonic stem cells

scientific article published on 13 April 2020

Transcriptional profiling of MCF7 breast cancer cells in response to 5-Fluorouracil: relationship with cell cycle changes and apoptosis, and identification of novel targets of p53.

artículo científico publicado en 2006

Two-way clustering of gene expression profiles by sparse matrix factorization

article

bioNMF: a versatile tool for non-negative matrix factorization in biology

artículo científico publicado en 2006

bioNMF: a web-based tool for nonnegative matrix factorization in biology.

artículo científico publicado en 2008

iPS-Derived Early Oligodendrocyte Progenitor Cells from SPMS Patients Reveal Deficient In Vitro Cell Migration Stimulation

artículo científico publicado en 2020

mCSEA: detecting subtle differentially methylated regions

scientific article published on 01 September 2019

Lista de obras de Pedro Carmona-Saez

A comprehensive database for integrated analysis of omics data in autoimmune diseases

A free radical-generating system induces the cholesterol biosynthesis pathway: a role in Alzheimer's disease

A literature-based similarity metric for biological processes.

A survey of gene expression meta-analysis: methods and applications

Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.

ChIPCodis: mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data

Computational Methods and Software Tools for Functional Analysis of miRNA Data

Deep Learning in Omics Data Analysis and Precision Medicine

Differential Treatments Based on Drug-induced Gene Expression Signatures and Longitudinal Systemic Lupus Erythematosus Stratification

Direct Detection of miR-122 in Hepatotoxicity Using Dynamic Chemical Labeling Overcomes Stability and isomiR Challenges

Discovering semantic features in the literature: a foundation for building functional associations

Exosomal miRNA profile as complementary tool in the diagnostic and prediction of treatment response in localized breast cancer under neoadjuvant chemotherapy

Functional Enrichment Analysis of Regulatory Elements

GARP is a key molecule for mesenchymal stromal cell responses to TGF-β and fundamental to control mitochondrial ROS levels

GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists

GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information

Genetic polymorphisms influence on the response to clopidogrel in peripheral artery disease patients following percutaneous transluminal angioplasty.

Gut Microbiota Composition Is Associated With the Global DNA Methylation Pattern in Obesity

ImaGEO: integrative gene expression meta-analysis from GEO database

Influence of the HER2 Ile655Val polymorphism on trastuzumab-induced cardiotoxicity in HER2-positive breast cancer patients: a meta-analysis.

Integrated analysis of gene expression by Association Rules Discovery

MARQ: an online tool to mine GEO for experiments with similar or opposite gene expression signatures

MetaGenyo: a web tool for meta-analysis of genetic association studies.

Metagene projection characterizes GEN2.2 and CAL-1 as relevant human plasmacytoid dendritic cell models

Methodology for Y Chromosome Capture: A complete genome sequence of Y chromosome using flow cytometry, laser microdissection and magnetic streptavidin-beads.

NOMePlot: analysis of DNA methylation and nucleosome occupancy at the single molecule.

Placental DNA methylation signatures of maternal smoking during pregnancy and potential impacts on fetal growth

Polycomb regulation is coupled to cell cycle transition in pluripotent stem cells

Prognostic factor analysis of circulating tumor cells in peripheral blood of patients with peritoneal carcinomatosis of colon cancer origin treated with cytoreductive surgery plus an intraoperative hyperthermic intraperitoneal chemotherapy procedure

Prognostic role of genetic biomarkers in clinical progression of prostate cancer

Ribavirin acts via multiple pathways in inhibition of leukemic cell proliferation.

SENT: semantic features in text

SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays.

Shared signatures between rheumatoid arthritis, systemic lupus erythematosus and Sjögren's syndrome uncovered through gene expression meta-analysis.

Stratification of Systemic Lupus Erythematosus Patients Into Three Groups of Disease Activity Progression According to Longitudinal Gene Expression

Support for phosphoinositol 3 kinase and mTOR inhibitors as treatment for lupus using in-silico drug-repurposing analysis

The molecular clock protein Bmal1 regulates cell differentiation in mouse embryonic stem cells

Transcriptional profiling of MCF7 breast cancer cells in response to 5-Fluorouracil: relationship with cell cycle changes and apoptosis, and identification of novel targets of p53.

Two-way clustering of gene expression profiles by sparse matrix factorization

bioNMF: a versatile tool for non-negative matrix factorization in biology

bioNMF: a web-based tool for nonnegative matrix factorization in biology.

iPS-Derived Early Oligodendrocyte Progenitor Cells from SPMS Patients Reveal Deficient In Vitro Cell Migration Stimulation

mCSEA: detecting subtle differentially methylated regions