Lista de obras - Chris Barnes - Dominio Público Uruguay

A Bayesian framework for the analysis of systems biology models of the brain

artículo científico publicado en 2019

A Statistical Approach Reveals Designs for the Most Robust Stochastic Gene Oscillators

artículo científico publicado en 2016

A computational method for the investigation of multistable systems and its application to genetic switches

artículo científico publicado en 2016

A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation

artículo científico publicado en 2014

A genome-wide association study confirms VKORC1, CYP2C9, and CYP4F2 as principal genetic determinants of warfarin dose

artículo científico publicado en 2009

A robust statistical method for case-control association testing with copy number variation

scientific article published on 07 September 2008

A theoretical framework for the regulation of Shh morphogen-controlled gene expression

artículo científico publicado en 2014

ABC-SysBio--approximate Bayesian computation in Python with GPU support

artículo científico publicado en 2010

An acetoacetate-inducible bacterial sensor

Arterial thromboembolic disease: A single-centre case series study

artículo científico publicado en 2007

Assessing the Outcome of Systemic Tissue Plasminogen Activator for the Management of Venous and Arterial Thrombosis in Pediatrics

artículo científico publicado en 2007

Author Correction: Quantification of subclonal selection in cancer from bulk sequencing data

scientific article published on 01 September 2018

Automated design of synthetic microbial communities

scientific article published on 28 January 2021

Bayesian design of synthetic biological systems

artículo científico publicado en 2011

Bayesian design strategies for synthetic biology ⬇️

artículo científico publicado el 5 de octubre de 2011

Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation

artículo científico publicado en 2012

Catch my drift? Making sense of genomic intra-tumour heterogeneity

artículo científico publicado en 2017

Change in serum procalcitonin (DeltaPct) predicts the clinical outcome of children admitted with febrile neutropenia

scientific article published on 01 September 2002

Clinical drug resistance linked to interconvertible phenotypic and functional states of tumor-propagating cells in multiple myeloma.

artículo científico publicado en 2012

Combined D0 measurements constraining theCP-violating phase and width difference in theBs0system

scholarly article

Combining a Toggle Switch and a Repressilator within the AC-DC Circuit Generates Distinct Dynamical Behaviors

artículo científico publicado en 2018

Computational design approaches and tools for synthetic biology ⬇️

artículo científico publicado el 24 de enero de 2011

Correction to "FlopR: An Open Source Software Package for Calibration and Normalization of Plate Reader and Flow Cytometry Data"

artículo científico publicado en 2021

Crypt fusion as a homeostatic mechanism in the human colon

artículo científico publicado en 2019

Deep reinforcement learning for the control of microbial co-cultures in bioreactors

scientific article published on 10 April 2020

Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes

artículo científico

Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor

scientific article published on 08 November 2019

Direct Limits on the B s 0 Oscillation Frequency

artículo científico publicado en 2006

Directional collective cell migration emerges as a property of cell interactions

artículo científico publicado en 2014

Erratum to: “Search for particles decaying into a Z boson and a photon in p p ¯ collisions at s = 1.96 TeV ” [Phys. Lett. B 641 (2006) 415]

scholarly article published in Physics Letters B

Erratum: Measurement of Inclusive Differential Cross Sections forΥ(1S)Production inpp¯Collisions ats=1.96 TeV[Phys. Rev. Lett.94, 232001 (2005)]

artículo científico publicado en 2008

Erratum: Measurement of theWWProduction Cross Section inpp¯Collisions ats=1.96 TeV[Phys. Rev. Lett.94, 151801 (2005)]

artículo científico publicado en 2008

Erratum: Measurement ofσ(pp¯→Z)·Br(Z→ττ)ats=1.96 TeV[Phys. Rev. D71, 072004 (2005)]

scholarly article published in Physical Review D

Evidence for Production of Single Top Quarks and First Direct Measurement of | V t b |

artículo científico publicado en 2007

Evolutionary dynamics of neoantigens in growing tumors

artículo científico publicado en 2020

Executive Function Following Child Stroke: The Impact of Lesion Location

artículo científico publicado en 2010

Executive function following child stroke: the impact of lesion size

artículo científico publicado en 2011

Experimental Discrimination between Charge 2 e / 3 Top Quark and Charge 4 e / 3 Exotic Quark Production Scenarios

artículo científico publicado en 2007

Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging

artículo científico publicado en 2010

GPU accelerated biochemical network simulation

artículo científico publicado en 2011

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

artículo científico publicado en 2010

Genome-wide screen for metabolic syndrome susceptibility Loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits

scientific journal article

Identification of neutral tumor evolution across cancer types.

artículo científico publicado en 2016

Independent estimation of the frequency of rare CNVs in the UK population confirms their role in schizophrenia

artículo científico publicado en 2011

Integrating common and rare genetic variation in diverse human populations

artículo científico publicado en 2010

Lifetime Difference andCP-Violating Phase in theBs0System

scientific article published in Physical Review Letters

Limits on anomalous trilinear gauge couplings fromWW→e+e−,WW→e±μ∓, andWW→μ+μ−events frompp¯collisions ats=1.96 TeV

scholarly article

Mathematical models help explain experimental data. Response to 'Transcriptional interpretation of Shh morphogen signaling: computational modeling validates empirically established models'.

artículo científico publicado en 2016

Measurement of B ( t → W b ) / B ( t → W q ) at s = 1.96 TeV

Measurement of Inclusive Differential Cross Sections forΥ(1S)Production inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2005

Measurement of Semileptonic Branching Fractions ofBMesons to NarrowD**States

artículo científico publicado en 2005

Measurement of dijet azimuthal decorrelations at central rapidities in pp collisions at sqrt s =1.96 TeV.

artículo científico publicado en 2005

Measurement of the B0s lifetime in the exclusive decay channel B0s-->J/psiphi

artículo científico publicado en 2005

Measurement of the Bs(0) lifetime using semileptonic decays

artículo científico publicado en 2006

Measurement of the Charge Asymmetry in SemileptonicBs0Decays

artículo científico publicado en 2007

Measurement of the Lifetime Difference in theBs0System

artículo científico publicado en 2005

Measurement of the Ratio of Inclusive Cross Sectionsσ(pp¯→Z+b jet)/σ(pp¯→Z+jet)ats=1.96 TeV

artículo científico publicado en 2005

Measurement of the Ratio ofB+andB0Meson Lifetimes

artículo científico publicado en 2005

Measurement of the isolated photon cross section in p p ¯ collisions at s = 1.96 TeV

article by Victor Mukhamedovich Abazov et al published August 2006 in Physics Letters B

Measurement of the ratios of the Z / γ ∗ + ⩾ n jet production cross sections to the total inclusive Z / γ ∗ cross section in p p ¯ collisions at s = 1.96 TeV

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV in dilepton final states

article by Victor Mukhamedovich Abazov et al published October 2005 in Physics Letters B

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV using kinematic characteristics of lepton+jets events

article by Victor Mukhamedovich Abazov et al published October 2005 in Physics Letters B

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV using lepton+jets events with lifetime b-tagging

article by Victor Mukhamedovich Abazov et al published October 2005 in Physics Letters B

Measurement of the top quark mass in the dilepton channel

article by Victor Mukhamedovich Abazov et al published October 2007 in Physics Letters B

Measurement of the top quark mass in the lepton+jets final state with the matrix element method

article by Victor Mukhamedovich Abazov et al published 27 November 2006 in Physical Review D

Measurement of theCP-violation parameter ofB0mixing and decay withpp¯→μμXdata

article by Victor Mukhamedovich Abazov et al published 13 November 2006 in Physical Review D

Measurement of theWWProduction Cross Section inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2005

Measurement of theWboson helicity in top quark decays at D0

scholarly article

Measurement of thepp¯→Wγ+Xcross section ats=1.96 TeV andWWγanomalous coupling limits

scholarly article

Measurement of thepp¯→tt¯+Xproduction cross section ats=1.96 TeVin the fully hadronic decay channel

scholarly article

Measurement of thett¯production cross section inpp¯collisions ats=1.96 TeVusing secondary vertexbtagging

article by Victor Mukhamedovich Abazov et al published 26 December 2006 in Physical Review D

Measurement of theΛb0Lifetime in the DecayΛb0→J/ψΛ0with the D0 Detector

scientific article published in Physical Review Letters

Measurement ofBdmixing using opposite-side flavor tagging

article by Victor Mukhamedovich Abazov et al published 15 December 2006 in Physical Review D

Measurement ofσ(pp¯→Z)·Br(Z→ττ)ats=1.96 TeV

scholarly article

Measuring single cell divisions in human tissues from multi-region sequencing data

artículo científico publicado en 2020

Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios

artículo científico publicado en 2020

Mechanistic Modelling and Bayesian Inference Elucidates the Variable Dynamics of Double-Strand Break Repair.

artículo científico publicado en 2016

Mechanistic modelling and Bayesian inference elucidates the variable dynamics of double-strand break repair

article

Model selection in systems biology depends on experimental design

artículo científico publicado en 2014

Multivariate searches for single top quark production with the D0 detector

scholarly article

Observation and properties of the X(3872) decaying to J/psipi(+)pi(-) in pp collisions at sqrt[s]=1.96 TeV

artículo científico publicado en 2004

On optimality of kernels for approximate Bayesian computation using sequential Monte Carlo

artículo científico publicado en 2013

Origins and functional impact of copy number variation in the human genome

artículo científico publicado en 2010

Phenotypic plasticity and genetic control in colorectal cancer evolution

artículo científico publicado en 2022

Production ofWZEvents inpp¯Collisions ats=1.96 TeVand Limits on AnomalousWWZCouplings

artículo científico publicado en 2005

Ptch1 and Gli regulate Shh signalling dynamics via multiple mechanisms

artículo científico publicado en 2015

Quantification of subclonal selection in cancer from bulk sequencing data

artículo científico publicado en 2018

Reciprocal duplication of the Williams-Beuren syndrome deletion on chromosome 7q11.23 is associated with schizophrenia

artículo científico publicado en 2013

Reconstructing single-cell karyotype alterations in colorectal cancer identifies punctuated and gradual diversification patterns

artículo científico publicado en 2021

Reduced bone density in children on long-term warfarin

artículo científico publicado en 2005

Reduced burden of very large and rare CNVs in bipolar affective disorder

artículo científico publicado en 2013

Reply to ‘Revisiting signatures of neutral tumor evolution in the light of complexity of cancer genomic data’

scientific article published on 01 December 2018

Reply: Is the evolution of tumors Darwinian or non-Darwinian?

Reply: Neutral tumor evolution?

Reply: Uncertainties in tumor allele frequencies limit power to infer evolutionary pressures

artículo científico publicado en 2017

Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling.

artículo científico publicado en 2016

SMN1 gene duplications are associated with sporadic ALS.

artículo científico publicado en 2012

Search for Associated Higgs Boson ProductionWH→WWW*→l±νl′±ν′+Xinpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2006

Search for Large Extra Spatial Dimensions in Dimuon Production with the D0 Detector

scientific article published in Physical Review Letters

Search for Neutral Higgs Bosons Decaying to Tau Pairs inpp¯Collisions ats=1.96 TeV

scientific article published in Physical Review Letters

Search for Neutral Supersymmetric Higgs Bosons in Multijet Events ats=1.96 TeV

artículo científico publicado en 2005

Search for Neutral, Long-Lived Particles Decaying into Two Muons inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2006

Search for Pair Production of Scalar Bottom Quarks inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2006

Search for R-parity violating supersymmetry via the L L E ¯ couplings λ 121 , λ 122 or λ 133 in p p ¯ collisions at s = 1.96 TeV

article by Victor Mukhamedovich Abazov et al published July 2006 in Physics Letters B

Search for Randall-Sundrum Gravitons in Dilepton and Diphoton Final States

artículo científico publicado en 2005

Search for Resonant Second Generation Slepton Production at the Fermilab Tevatron

artículo científico publicado en 2006

Search for Supersymmetry via Associated Production of Charginos and Neutralinos in Final States with Three Leptons

artículo científico publicado en 2005

Search for Techniparticles ine+jetsEvents at D0

artículo científico publicado en 2007

Search for W ′ boson production in the W ′ → t b ¯ decay channel

Search for a heavy resonance decaying into aZ+jetfinal state inpp¯collisions ats=1.96 TeVusing the D0 detector

scholarly article

Search for anomalous heavy-flavor quark production in association with W bosons

artículo científico publicado en 2005

Search for doubly charged higgs boson pair production in the decay to mu(+)mu(+)mu(-)mu(-) in pp collisions at sqrt[s]=1.96 TeV.

artículo científico publicado en 2004

Search for excited muons inpp¯collisions ats=1.96 TeV

scholarly article

Search for first-generation scalar leptoquarks inpp¯collisions ats=1.96 TeV

scholarly article

Search for pair production of second generation scalar leptoquarks in p p ¯ collisions at s = 1.96 TeV

Search for particles decaying into a Z boson and a photon in p p ¯ collisions at s = 1.96 TeV

Search for production of single top quarks via tcg and tug flavor-changing-neutral-current couplings

artículo científico publicado en 2007

Search for right-handedWbosons in top quark decay

article by Victor Mukhamedovich Abazov et al published 29 July 2005 in Physical Review D

Search for scalar leptoquarks in the acoplanar jet topology in p p ¯ collisions at s = 1.96 TeV

Search for single production of scalar leptoquarks in p p ¯ collisions decaying into muons and quarks with the D0 detector

Search for single top quark production in p p ¯ collisions at s = 1.96 TeV

Search for squarks and gluinos in events with jets and missing transverse energy in p p ¯ collisions at s = 1.96 TeV

Search for supersymmetry with gauge-mediated breaking in diphoton events at D0.

artículo científico publicado en 2005

Search for the Flavor-Changing Neutral Current DecayBs0→μ+μ−inpp¯Collisions ats=1.96 TeVwith the D0 Detector

artículo científico publicado en 2005

Search for the Higgs Boson inH→WW(*)Decays inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2006

Search for the Standard Model Higgs Boson in thepp¯→ZH→νν¯bb¯Channel

artículo científico publicado en 2006

Search for the pair production of scalar top quarks in the acoplanar charm jet final state in collisions at

article by Victor Mukhamedovich Abazov et al published February 2007 in Physics Letters B

Search for the rare decayBs0→ϕμ+μ−with the D0 detector

scholarly article

Search forWbb¯andWHProduction inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2005

Study ofZγEvents and Limits on AnomalousZZγandZγγCouplings inpp¯Collisions ats=1.96 TeV

artículo científico publicado en 2005

Subclonal reconstruction of tumors by using machine learning and population genetics

scientific article published on 02 September 2020

Synthetic Biology and Engineered Live Biotherapeutics: Toward Increasing System Complexity

scientific article published on 01 July 2018

The LHCb Detector at the LHC

artículo científico publicado en 2008

The upgraded DØ detector

article

Three-Year Wilkinson Microwave Anisotropy Probe (WMAP) Observations: Polarization Analysis

article

Three‐YearWilkinson Microwave Anisotropy Probe(WMAP) Observations: Beam Profiles, Data Processing, Radiometer Characterization, and Systematic Error Limits

Thromboembolic complications related to indwelling central venous catheters in children with oncological/haematological diseases: a retrospective study of 362 catheters

artículo científico publicado en 2002

Towards an Aspect-Oriented Design and Modelling Framework for Synthetic Biology

scholarly article by Philipp Boeing et al published 15 September 2018 in Processes (Basel, Switzerland)

Two New Plasmid Post-segregational Killing Mechanisms for the Implementation of Synthetic Gene Networks in Escherichia coli

article

Venous thromboembolic disease: A single-centre case series study

artículo científico publicado en 2006

Lista de obras de Chris Barnes

A Bayesian framework for the analysis of systems biology models of the brain

A Statistical Approach Reveals Designs for the Most Robust Stochastic Gene Oscillators

A computational method for the investigation of multistable systems and its application to genetic switches

A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation

A genome-wide association study confirms VKORC1, CYP2C9, and CYP4F2 as principal genetic determinants of warfarin dose

A robust statistical method for case-control association testing with copy number variation

A theoretical framework for the regulation of Shh morphogen-controlled gene expression

ABC-SysBio--approximate Bayesian computation in Python with GPU support

An acetoacetate-inducible bacterial sensor

Arterial thromboembolic disease: A single-centre case series study

Assessing the Outcome of Systemic Tissue Plasminogen Activator for the Management of Venous and Arterial Thrombosis in Pediatrics

Author Correction: Quantification of subclonal selection in cancer from bulk sequencing data

Automated design of synthetic microbial communities

Bayesian design of synthetic biological systems

Bayesian design strategies for synthetic biology ⬇️

Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation

Catch my drift? Making sense of genomic intra-tumour heterogeneity

Change in serum procalcitonin (DeltaPct) predicts the clinical outcome of children admitted with febrile neutropenia

Clinical drug resistance linked to interconvertible phenotypic and functional states of tumor-propagating cells in multiple myeloma.

Combined D0 measurements constraining theCP-violating phase and width difference in theBs0system

Combining a Toggle Switch and a Repressilator within the AC-DC Circuit Generates Distinct Dynamical Behaviors

Computational design approaches and tools for synthetic biology ⬇️

Correction to "FlopR: An Open Source Software Package for Calibration and Normalization of Plate Reader and Flow Cytometry Data"

Crypt fusion as a homeostatic mechanism in the human colon

Deep reinforcement learning for the control of microbial co-cultures in bioreactors

Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes

Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor

Direct Limits on the B s 0 Oscillation Frequency

Directional collective cell migration emerges as a property of cell interactions

Erratum to: “Search for particles decaying into a Z boson and a photon in p p ¯ collisions at s = 1.96 TeV ” [Phys. Lett. B 641 (2006) 415]

Erratum: Measurement of Inclusive Differential Cross Sections forΥ(1S)Production inpp¯Collisions ats=1.96 TeV[Phys. Rev. Lett.94, 232001 (2005)]

Erratum: Measurement of theWWProduction Cross Section inpp¯Collisions ats=1.96 TeV[Phys. Rev. Lett.94, 151801 (2005)]

Erratum: Measurement ofσ(pp¯→Z)·Br(Z→ττ)ats=1.96 TeV[Phys. Rev. D71, 072004 (2005)]

Evidence for Production of Single Top Quarks and First Direct Measurement of | V t b |

Evolutionary dynamics of neoantigens in growing tumors

Executive Function Following Child Stroke: The Impact of Lesion Location

Executive function following child stroke: the impact of lesion size

Experimental Discrimination between Charge 2 e / 3 Top Quark and Charge 4 e / 3 Exotic Quark Production Scenarios

Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging

GPU accelerated biochemical network simulation

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

Genome-wide screen for metabolic syndrome susceptibility Loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits

Identification of neutral tumor evolution across cancer types.

Independent estimation of the frequency of rare CNVs in the UK population confirms their role in schizophrenia

Integrating common and rare genetic variation in diverse human populations

Lifetime Difference andCP-Violating Phase in theBs0System

Limits on anomalous trilinear gauge couplings fromWW→e+e−,WW→e±μ∓, andWW→μ+μ−events frompp¯collisions ats=1.96 TeV

Mathematical models help explain experimental data. Response to 'Transcriptional interpretation of Shh morphogen signaling: computational modeling validates empirically established models'.

Measurement of B ( t → W b ) / B ( t → W q ) at s = 1.96 TeV

Measurement of Inclusive Differential Cross Sections forΥ(1S)Production inpp¯Collisions ats=1.96 TeV

Measurement of Semileptonic Branching Fractions ofBMesons to NarrowD**States

Measurement of dijet azimuthal decorrelations at central rapidities in pp collisions at sqrt s =1.96 TeV.

Measurement of the B0s lifetime in the exclusive decay channel B0s-->J/psiphi

Measurement of the Bs(0) lifetime using semileptonic decays

Measurement of the Charge Asymmetry in SemileptonicBs0Decays

Measurement of the Lifetime Difference in theBs0System

Measurement of the Ratio of Inclusive Cross Sectionsσ(pp¯→Z+b jet)/σ(pp¯→Z+jet)ats=1.96 TeV

Measurement of the Ratio ofB+andB0Meson Lifetimes

Measurement of the isolated photon cross section in p p ¯ collisions at s = 1.96 TeV

Measurement of the ratios of the Z / γ ∗ + ⩾ n jet production cross sections to the total inclusive Z / γ ∗ cross section in p p ¯ collisions at s = 1.96 TeV

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV in dilepton final states

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV using kinematic characteristics of lepton+jets events

Measurement of the t t ¯ production cross section in p p ¯ collisions at s = 1.96 TeV using lepton+jets events with lifetime b-tagging

Measurement of the top quark mass in the dilepton channel

Measurement of the top quark mass in the lepton+jets final state with the matrix element method

Measurement of theCP-violation parameter ofB0mixing and decay withpp¯→μμXdata

Measurement of theWWProduction Cross Section inpp¯Collisions ats=1.96 TeV

Measurement of theWboson helicity in top quark decays at D0

Measurement of thepp¯→Wγ+Xcross section ats=1.96 TeV andWWγanomalous coupling limits

Measurement of thepp¯→tt¯+Xproduction cross section ats=1.96 TeVin the fully hadronic decay channel

Measurement of thett¯production cross section inpp¯collisions ats=1.96 TeVusing secondary vertexbtagging

Measurement of theΛb0Lifetime in the DecayΛb0→J/ψΛ0with the D0 Detector

Measurement ofBdmixing using opposite-side flavor tagging

Measurement ofσ(pp¯→Z)·Br(Z→ττ)ats=1.96 TeV

Measuring single cell divisions in human tissues from multi-region sequencing data

Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios

Mechanistic Modelling and Bayesian Inference Elucidates the Variable Dynamics of Double-Strand Break Repair.

Mechanistic modelling and Bayesian inference elucidates the variable dynamics of double-strand break repair

Model selection in systems biology depends on experimental design