Lista de obras - Gary An - Dominio Público Uruguay

A Computational, Tissue-Realistic Model of Pressure Ulcer Formation in Individuals with Spinal Cord Injury

artículo científico publicado en 2015

A case report of thoracic compartment syndrome in the setting of penetrating chest trauma and review of the literature

scientific article published on 30 July 2010

A comparative approach for the investigation of biological information processing: an examination of the structure and function of computer hard drives and DNA

artículo científico publicado en 2010

A proposal for augmenting biological model construction with a semi-intelligent computational modeling assistant

artículo científico publicado en 2012

Addressing the translational dilemma: dynamic knowledge representation of inflammation using agent-based modeling

artículo científico publicado en 2012

Agent-based dynamic knowledge representation of Pseudomonas aeruginosa virulence activation in the stressed gut: Towards characterizing host-pathogen interactions in gut-derived sepsis

artículo científico publicado en 2011

Agent-based model of epithelial host-pathogen interactions in anastomotic leak

artículo científico publicado en 2013

Agent-based model of fecal microbial transplant effect on bile acid metabolism on suppressing Clostridium difficile infection: an example of agent-based modeling of intestinal bacterial infection

artículo científico publicado en 2014

Agent-based models in translational systems biology.

artículo científico publicado en 2009

Agent-based models of inflammation in translational systems biology: A decade later

artículo científico publicado en 2019

An agent-based modeling framework linking inflammation and cancer using evolutionary principles: description of a generative hierarchy for the hallmarks of cancer and developing a bridge between mechanism and epidemiological data

artículo científico publicado en 2014

Augmenting Surgery via Multi-scale Modeling and Translational Systems Biology in the Era of Precision Medicine: A Multidisciplinary Perspective

artículo científico publicado en 2016

Bayesian inference of the lung alveolar spatial model for the identification of alveolar mechanics associated with acute respiratory distress syndrome

artículo científico publicado en 2013

Blister fluid composition in a pediatric patient with toxic epidermal necrolysis

artículo científico publicado en 2008

Chemical scalp burns after hair highlights.

artículo científico publicado en 2007

Closing the scientific loop: bridging correlation and causality in the petaflop age.

artículo científico publicado en 2010

Collagen degradation and MMP9 activation by Enterococcus faecalis contribute to intestinal anastomotic leak

artículo científico publicado en 2015

Computational disease modeling - fact or fiction?

artículo científico publicado en 2009

Concepts for developing a collaborative in silico model of the acute inflammatory response using agent-based modeling

artículo científico publicado en 2006

Control of presacral hemorrhage after penetrating trauma: a new technique

artículo científico publicado en 2007

Detection of intra-abdominal injury using diagnostic peritoneal lavage after shotgun wound to the abdomen.

artículo científico publicado en 2003

Dynamic knowledge representation using agent-based modeling: ontology instantiation and verification of conceptual models

artículo científico

Even ephemeral endotoxin exposure establishes endotoxin tolerance.

artículo científico publicado en 2008

Evisceration after abdominal stab wounds: is laparotomy required?

artículo científico publicado en 1999

Examining the Relationship between Pre-Malignant Breast Lesions, Carcinogenesis and Tumor Evolution in the Mammary Epithelium Using an Agent-Based Model

artículo científico publicado en 2016

Examining the controllability of sepsis using genetic algorithms on an agent-based model of systemic inflammation

artículo científico publicado en 2018

Examining the pathogenesis of breast cancer using a novel agent-based model of mammary ductal epithelium dynamics

artículo científico publicado en 2013

Extreme-scale Dynamic Exploration of a Distributed Agent-based Model with the EMEWS Framework

scientific article published on 30 August 2018

From data patterns to mechanistic models in acute critical illness.

artículo científico publicado en 2014

How implementation of systems biology into clinical trials accelerates understanding of diseases.

artículo científico publicado en 2014

Hypercalcemia in patients in the burn intensive care unit

artículo científico publicado en 2007

Immature oxidative stress management as a unifying principle in the pathogenesis of necrotizing enterocolitis: insights from an agent-based model.

artículo científico publicado en 2012

In Silico Augmentation of the Drug Development Pipeline: Examples from the study of Acute Inflammation.

artículo científico publicado en 2011

Inflammation and Disease: Modelling and Modulation of the Inflammatory Response to Alleviate Critical Illness

artículo científico publicado en 2018

Insights into the pathogenesis of ulcerative colitis from a murine model of stasis-induced dysbiosis, colonic metaplasia, and genetic susceptibility

artículo científico publicado en 2016

Integrating physiology across scales and formalizing hypothesis exploration with agent-based modeling.

artículo científico publicado en 2015

Integration of TGF-β- and EGFR-based signaling pathways using an agent-based model of epithelial restitution.

artículo científico publicado en 2012

Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak

artículo científico publicado en 2012

Introduction of a Framework for Dynamic Knowledge Representation of the Control Structure of Transplant Immunology: Employing the Power of Abstraction with a Solid Organ Transplant Agent-Based Model

artículo científico publicado en 2015

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation

artículo científico publicado en 2008

Investigation of inflammation and tissue patterning in the gut using a Spatially Explicit General-purpose Model of Enteric Tissue (SEGMEnT).

artículo científico publicado en 2014

Investigation of the essential role of platelet-tumor cell interactions in metastasis progression using an agent-based model

artículo científico publicado en 2014

Kinetics and isotype assessment of antibodies targeting the spike protein receptor-binding domain of severe acute respiratory syndrome-coronavirus-2 in COVID-19 patients as a function of age, biological sex and disease severity

scientific article published on 07 October 2020

Learning-accelerated discovery of immune-tumour interactions

scientific article published on 07 June 2019

Linking Inflammation, Cardiorespiratory Variability, and Neural Control in Acute Inflammation via Computational Modeling

artículo científico publicado en 2012

Mathematical modeling in medicine: a means, not an end.

artículo científico publicado en 2005

Mathematical models of the acute inflammatory response.

artículo científico publicado en 2004

Mechanistic simulations of inflammation: current state and future prospects.

artículo científico publicado en 2008

Multi-scale Modeling in Clinical Oncology: Opportunities and Barriers to Success.

artículo científico publicado en 2016

Multiscale Modeling in the Clinic: Drug Design and Development

artículo científico publicado en 2016

Optimization and Control of Agent-Based Models in Biology: A Perspective.

artículo científico publicado en 2016

Phenomenological issues related to the measurement, mechanisms and manipulation of complex biological systems

scientific article published on 01 January 2006

Proceedings of the first international summit on intestinal anastomotic leak, Chicago, Illinois, October 4-5, 2012.

artículo científico publicado en 2014

Purpura fulminans in an adult patient with Haemophilus influenzae sepsis: case report and review of the literature.

artículo científico publicado en 2006

Rapid community-driven development of a SARS-CoV-2 tissue simulator ⬇️

artículo científico publicado en 2020

Removal of inflammatory ascites is associated with dynamic modification of local and systemic inflammation along with prevention of acute lung injury: in vivo and in silico studies

artículo científico publicado en 2014

Sepsis: from pattern to mechanism and back.

artículo científico publicado en 2012

Small to large, lots to some, many to few: in silico navigation of the Translational Dilemma

artículo científico publicado en 2012

Systems biology and inflammation

artículo científico publicado en 2010

The Basic Immune Simulator: an agent-based model to study the interactions between innate and adaptive immunity

artículo científico publicado en 2007

The Crisis of Reproducibility, the Denominator Problem and the Scientific Role of Multi-scale Modeling

artículo científico publicado en 2018

The Hospital Microbiome Project: Meeting Report for the 1st Hospital Microbiome Project Workshop on sampling design and building science measurements, Chicago, USA, June 7th-8th 2012.

artículo científico publicado en 2013

The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013.

artículo científico publicado en 2013

The molecular Koch's postulates and surgical infection: a view forward

scientific article published on June 2010

Toll-like receptor 2 ligands on the staphylococcal cell wall downregulate superantigen-induced T cell activation and prevent toxic shock syndrome.

artículo científico publicado en 2009

Toward computational identification of multiscale "tipping points" in acute inflammation and multiple organ failure

artículo científico publicado en 2012

Towards anatomic scale agent-based modeling with a massively parallel spatially explicit general-purpose model of enteric tissue (SEGMEnT_HPC).

artículo científico publicado en 2015

Toxic Epidermal Necrolysis with Gastrointestinal Involvement: A Case Report and Review of the Literature

artículo científico publicado en 2016

Trans-mediastinal gunshot wounds: are "stable" patients really stable?

artículo científico publicado en 2002

Translational Systems Biology of Inflammation: Potential Applications to Personalized Medicine ⬇️

artículo científico publicado el 1 de septiembre de 2010

Translational systems biology of inflammation

artículo científico publicado en 2008

Translational systems biology using an agent-based approach for dynamic knowledge representation: An evolutionary paradigm for biomedical research

artículo científico publicado en 2010

Lista de obras de Gary An

A Computational, Tissue-Realistic Model of Pressure Ulcer Formation in Individuals with Spinal Cord Injury

A case report of thoracic compartment syndrome in the setting of penetrating chest trauma and review of the literature

A comparative approach for the investigation of biological information processing: an examination of the structure and function of computer hard drives and DNA

A proposal for augmenting biological model construction with a semi-intelligent computational modeling assistant

Addressing the translational dilemma: dynamic knowledge representation of inflammation using agent-based modeling

Agent-based dynamic knowledge representation of Pseudomonas aeruginosa virulence activation in the stressed gut: Towards characterizing host-pathogen interactions in gut-derived sepsis

Agent-based model of epithelial host-pathogen interactions in anastomotic leak

Agent-based model of fecal microbial transplant effect on bile acid metabolism on suppressing Clostridium difficile infection: an example of agent-based modeling of intestinal bacterial infection

Agent-based models in translational systems biology.

Agent-based models of inflammation in translational systems biology: A decade later

An agent-based modeling framework linking inflammation and cancer using evolutionary principles: description of a generative hierarchy for the hallmarks of cancer and developing a bridge between mechanism and epidemiological data

Augmenting Surgery via Multi-scale Modeling and Translational Systems Biology in the Era of Precision Medicine: A Multidisciplinary Perspective

Bayesian inference of the lung alveolar spatial model for the identification of alveolar mechanics associated with acute respiratory distress syndrome

Blister fluid composition in a pediatric patient with toxic epidermal necrolysis

Chemical scalp burns after hair highlights.

Closing the scientific loop: bridging correlation and causality in the petaflop age.

Collagen degradation and MMP9 activation by Enterococcus faecalis contribute to intestinal anastomotic leak

Computational disease modeling - fact or fiction?

Concepts for developing a collaborative in silico model of the acute inflammatory response using agent-based modeling

Control of presacral hemorrhage after penetrating trauma: a new technique

Detection of intra-abdominal injury using diagnostic peritoneal lavage after shotgun wound to the abdomen.

Dynamic knowledge representation using agent-based modeling: ontology instantiation and verification of conceptual models

Even ephemeral endotoxin exposure establishes endotoxin tolerance.

Evisceration after abdominal stab wounds: is laparotomy required?

Examining the Relationship between Pre-Malignant Breast Lesions, Carcinogenesis and Tumor Evolution in the Mammary Epithelium Using an Agent-Based Model

Examining the controllability of sepsis using genetic algorithms on an agent-based model of systemic inflammation

Examining the pathogenesis of breast cancer using a novel agent-based model of mammary ductal epithelium dynamics

Extreme-scale Dynamic Exploration of a Distributed Agent-based Model with the EMEWS Framework

From data patterns to mechanistic models in acute critical illness.

How implementation of systems biology into clinical trials accelerates understanding of diseases.

Hypercalcemia in patients in the burn intensive care unit

Immature oxidative stress management as a unifying principle in the pathogenesis of necrotizing enterocolitis: insights from an agent-based model.

In Silico Augmentation of the Drug Development Pipeline: Examples from the study of Acute Inflammation.

Inflammation and Disease: Modelling and Modulation of the Inflammatory Response to Alleviate Critical Illness

Insights into the pathogenesis of ulcerative colitis from a murine model of stasis-induced dysbiosis, colonic metaplasia, and genetic susceptibility

Integrating physiology across scales and formalizing hypothesis exploration with agent-based modeling.

Integration of TGF-β- and EGFR-based signaling pathways using an agent-based model of epithelial restitution.

Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak

Introduction of a Framework for Dynamic Knowledge Representation of the Control Structure of Transplant Immunology: Employing the Power of Abstraction with a Solid Organ Transplant Agent-Based Model

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation

Investigation of inflammation and tissue patterning in the gut using a Spatially Explicit General-purpose Model of Enteric Tissue (SEGMEnT).

Investigation of the essential role of platelet-tumor cell interactions in metastasis progression using an agent-based model

Kinetics and isotype assessment of antibodies targeting the spike protein receptor-binding domain of severe acute respiratory syndrome-coronavirus-2 in COVID-19 patients as a function of age, biological sex and disease severity

Learning-accelerated discovery of immune-tumour interactions

Linking Inflammation, Cardiorespiratory Variability, and Neural Control in Acute Inflammation via Computational Modeling

Mathematical modeling in medicine: a means, not an end.

Mathematical models of the acute inflammatory response.

Mechanistic simulations of inflammation: current state and future prospects.

Multi-scale Modeling in Clinical Oncology: Opportunities and Barriers to Success.

Multiscale Modeling in the Clinic: Drug Design and Development

Optimization and Control of Agent-Based Models in Biology: A Perspective.

Phenomenological issues related to the measurement, mechanisms and manipulation of complex biological systems

Proceedings of the first international summit on intestinal anastomotic leak, Chicago, Illinois, October 4-5, 2012.

Purpura fulminans in an adult patient with Haemophilus influenzae sepsis: case report and review of the literature.

Rapid community-driven development of a SARS-CoV-2 tissue simulator ⬇️

Removal of inflammatory ascites is associated with dynamic modification of local and systemic inflammation along with prevention of acute lung injury: in vivo and in silico studies

Sepsis: from pattern to mechanism and back.

Small to large, lots to some, many to few: in silico navigation of the Translational Dilemma

Systems biology and inflammation

The Basic Immune Simulator: an agent-based model to study the interactions between innate and adaptive immunity

The Crisis of Reproducibility, the Denominator Problem and the Scientific Role of Multi-scale Modeling

The Hospital Microbiome Project: Meeting Report for the 1st Hospital Microbiome Project Workshop on sampling design and building science measurements, Chicago, USA, June 7th-8th 2012.

The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013.

The molecular Koch's postulates and surgical infection: a view forward

Toll-like receptor 2 ligands on the staphylococcal cell wall downregulate superantigen-induced T cell activation and prevent toxic shock syndrome.

Toward computational identification of multiscale "tipping points" in acute inflammation and multiple organ failure

Towards anatomic scale agent-based modeling with a massively parallel spatially explicit general-purpose model of enteric tissue (SEGMEnT_HPC).

Toxic Epidermal Necrolysis with Gastrointestinal Involvement: A Case Report and Review of the Literature

Trans-mediastinal gunshot wounds: are "stable" patients really stable?

Translational Systems Biology of Inflammation: Potential Applications to Personalized Medicine ⬇️

Translational systems biology of inflammation

Translational systems biology using an agent-based approach for dynamic knowledge representation: An evolutionary paradigm for biomedical research